RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 THBDP07204 575 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 PLS3P13797 630 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 ZNF16P17020 682 aaPredicted RBP3.91□□□□□ -1.78
CCDC93-205ENST00000466171 SLC6A11P48066 632 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 SOX9P48436 509 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 GTF2A2P52657 109 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 ZNF143P52747 638 aaPredicted RBP3.91□□□□□ -1.78
CCDC93-205ENST00000466171 RPL11P62913 178 aaKnown RBP3.91□□□□□ -1.78
CCDC93-205ENST00000466171 NKX3-2P78367 333 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 SCRN1Q12765 414 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 PAK2Q13177 524 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 LDLRAD1Q5T700 205 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 MROH9Q5TGP6 573 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 PRAMEF18Q5VWM3 479 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 KIAA1211LQ6NV74 962 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 VHLLQ6RSH7 139 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 MILR1Q7Z6M3 343 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 FAM126BQ8IXS8 530 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 SLC16A11Q8NCK7 471 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 COPS5Q92905 334 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 PPP1R14AQ96A00 147 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 DDX41Q9UJV9 622 aaKnown RBP3.91□□□□□ -1.78
CCDC93-205ENST00000466171 ITGA1P56199 1179 aa3.9□□□□□ -1.79
CCDC93-205ENST00000466171 RACK1P63244 317 aaKnown RBP3.9□□□□□ -1.79
CCDC93-205ENST00000466171 CHRNA2Q15822 529 aa3.9□□□□□ -1.79
CCDC93-205ENST00000466171 C9orf131Q5VYM1 1079 aa3.9□□□□□ -1.79
CCDC93-205ENST00000466171 TEX2Q8IWB9 1127 aa3.9□□□□□ -1.79
CCDC93-205ENST00000466171 BVESQ8NE79 360 aa3.9□□□□□ -1.79
CCDC93-205ENST00000466171 SH3RF3Q8TEJ3 882 aaPredicted RBP3.9□□□□□ -1.79
CCDC93-205ENST00000466171 KLHL6Q8WZ60 621 aa3.9□□□□□ -1.79
CCDC93-205ENST00000466171 GPRASP2Q96D09 838 aa3.9□□□□□ -1.79
CCDC93-205ENST00000466171 WRNIP1Q96S55 665 aa3.9□□□□□ -1.79
CCDC93-205ENST00000466171 L2HGDHQ9H9P8 463 aa3.9□□□□□ -1.79
CCDC93-205ENST00000466171 GPRC5CQ9NQ84 441 aa3.9□□□□□ -1.79
CCDC93-205ENST00000466171 COA3Q9Y2R0 106 aaPredicted RBP3.9□□□□□ -1.79
CCDC93-205ENST00000466171 EMC9Q9Y3B6 208 aa3.9□□□□□ -1.79
CCDC93-205ENST00000466171 TIMM13Q9Y5L4 95 aaPredicted RBP3.9□□□□□ -1.79
CCDC93-205ENST00000466171 NPEPPSL1A6NEC2 478 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 SCAMP3O14828 347 aaKnown RBP3.89□□□□□ -1.79
CCDC93-205ENST00000466171 C6P13671 934 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 HMGA2P52926 109 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 E4F1Q66K89 784 aaPredicted RBP3.89□□□□□ -1.79
CCDC93-205ENST00000466171 ARHGEF18Q6ZSZ5 1173 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 CEP68Q76N32 757 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 LIMS2Q7Z4I7 341 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 STK32CQ86UX6 486 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 RIOX2Q8IUF8 465 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 FAM26EQ8N5C1 309 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 RASGRP4Q8TDF6 673 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 TRMT2BQ96GJ1 504 aaKnown RBP3.89□□□□□ -1.79
CCDC93-205ENST00000466171 CLIC6Q96NY7 704 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 SORCS2Q96PQ0 1159 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 KRTAP3-1Q9BYR8 98 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 TMEM168Q9H0V1 697 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 DEF6Q9H4E7 631 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 WDR26Q9H7D7 661 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 JADE2Q9NQC1 790 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 CYP26B1Q9NR63 512 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 ST6GALNAC2Q9UJ37 374 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 TSC22D4Q9Y3Q8 395 aa3.89□□□□□ -1.79
CCDC93-205ENST00000466171 CYR61O00622 381 aa3.88□□□□□ -1.79
CCDC93-205ENST00000466171 TACR2P21452 398 aa3.88□□□□□ -1.79
CCDC93-205ENST00000466171 STAT5AP42229 794 aa3.88□□□□□ -1.79
CCDC93-205ENST00000466171 CASP7P55210 303 aa3.88□□□□□ -1.79
CCDC93-205ENST00000466171 NCAPHQ15003 741 aa3.88□□□□□ -1.79
CCDC93-205ENST00000466171 PRR31Q5SQ13 230 aa3.88□□□□□ -1.79
CCDC93-205ENST00000466171 GTF2IRD2BQ6EKJ0 949 aa3.88□□□□□ -1.79
CCDC93-205ENST00000466171 GTF2IRD2Q86UP8 949 aa3.88□□□□□ -1.79
CCDC93-205ENST00000466171 CIR1Q86X95 450 aaPredicted RBP3.88□□□□□ -1.79
CCDC93-205ENST00000466171 TRIM59Q8IWR1 403 aa3.88□□□□□ -1.79
CCDC93-205ENST00000466171 DPF3Q92784 378 aa3.88□□□□□ -1.79
CCDC93-205ENST00000466171 DIO2Q92813 273 aa3.88□□□□□ -1.79
CCDC93-205ENST00000466171 TMEM169Q96HH4 297 aa3.88□□□□□ -1.79
CCDC93-205ENST00000466171 APEX2Q9UBZ4 518 aa3.88□□□□□ -1.79
CCDC93-205ENST00000466171 FTSJ1Q9UET6 329 aa3.88□□□□□ -1.79
CCDC93-205ENST00000466171 HGSO14964 777 aaPredicted RBP3.87□□□□□ -1.79
CCDC93-205ENST00000466171 MEFVO15553 781 aaPredicted RBP3.87□□□□□ -1.79
CCDC93-205ENST00000466171 MAFKO60675 156 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 FZD7O75084 574 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 ZNF28P17035 718 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 IL13P35225 146 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 NASPP49321 788 aaPredicted RBP3.87□□□□□ -1.79
CCDC93-205ENST00000466171 KCNAB2Q13303 367 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 MBLAC2Q68D91 279 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 TOE1Q96GM8 510 aaKnown RBP3.87□□□□□ -1.79
CCDC93-205ENST00000466171 CHAMP1Q96JM3 812 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 SYT3Q9BQG1 590 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 SSBP3Q9BWW4 388 aaPredicted RBP3.87□□□□□ -1.79
CCDC93-205ENST00000466171 KLC2Q9H0B6 622 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 NKX2-4Q9H2Z4 354 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 SEMA4AQ9H3S1 761 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 DTLQ9NZJ0 730 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 STRIP2Q9ULQ0 834 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 ZNF652Q9Y2D9 606 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 TCAF1Q9Y4C2 921 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 X6R8D5 127 aa3.87□□□□□ -1.79
CCDC93-205ENST00000466171 B4GALT3O60512 393 aa3.86□□□□□ -1.79
CCDC93-205ENST00000466171 CPP00450 1065 aa3.86□□□□□ -1.79
CCDC93-205ENST00000466171 FPR2P25090 351 aa3.86□□□□□ -1.79
CCDC93-205ENST00000466171 HOXC12P31275 282 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms