RNA–Protein interactions for RNA: ENST00000465819.1

CSMD2-207, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-207ENST00000465819 ORC4O43929 436 aa13.09□□□□□ -0.31
CSMD2-207ENST00000465819 EFCAB14O75071 495 aa13.09□□□□□ -0.31
CSMD2-207ENST00000465819 TOP1P11387 765 aaKnown RBP13.09□□□□□ -0.31
CSMD2-207ENST00000465819 CKBP12277 381 aa13.09□□□□□ -0.31
CSMD2-207ENST00000465819 PDE1AP54750 535 aa13.09□□□□□ -0.31
CSMD2-207ENST00000465819 TCTN1Q2MV58 587 aa13.09□□□□□ -0.31
CSMD2-207ENST00000465819 CCDC62Q6P9F0 684 aa13.09□□□□□ -0.31
CSMD2-207ENST00000465819 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.09□□□□□ -0.31
CSMD2-207ENST00000465819 ANAPC4Q9UJX5 808 aa13.09□□□□□ -0.31
CSMD2-207ENST00000465819 A0A0D9SFI3 127 aa13.08□□□□□ -0.32
CSMD2-207ENST00000465819 GH1P01241 217 aa13.08□□□□□ -0.32
CSMD2-207ENST00000465819 IGHDP01880 384 aa13.08□□□□□ -0.32
CSMD2-207ENST00000465819 PDHBP11177 359 aa13.08□□□□□ -0.32
CSMD2-207ENST00000465819 ALADP13716 330 aa13.08□□□□□ -0.32
CSMD2-207ENST00000465819 CASTP20810 708 aaKnown RBP13.08□□□□□ -0.32
CSMD2-207ENST00000465819 IKBKEQ14164 716 aa13.08□□□□□ -0.32
CSMD2-207ENST00000465819 PTCRAQ6ISU1 281 aaPredicted RBP13.08□□□□□ -0.32
CSMD2-207ENST00000465819 KAT2BQ92831 832 aa13.08□□□□□ -0.32
CSMD2-207ENST00000465819 TMEM47Q9BQJ4 181 aa13.08□□□□□ -0.32
CSMD2-207ENST00000465819 TOMM22Q9NS69 142 aa13.08□□□□□ -0.32
CSMD2-207ENST00000465819 GTF2IRD1Q9UHL9 959 aa13.08□□□□□ -0.32
CSMD2-207ENST00000465819 MICAL3Q7RTP6 2002 aa13.08□□□□□ -0.32
CSMD2-207ENST00000465819 FGRP09769 529 aa13.07□□□□□ -0.32
CSMD2-207ENST00000465819 ARHGAP1Q07960 439 aa13.07□□□□□ -0.32
CSMD2-207ENST00000465819 ZNF543Q08ER8 600 aa13.07□□□□□ -0.32
CSMD2-207ENST00000465819 LY6KQ17RY6 165 aa13.07□□□□□ -0.32
CSMD2-207ENST00000465819 CSPP1Q1MSJ5 1256 aa13.07□□□□□ -0.32
CSMD2-207ENST00000465819 RRP12Q5JTH9 1297 aaKnown RBP13.07□□□□□ -0.32
CSMD2-207ENST00000465819 FAM117BQ6P1L5 589 aa13.07□□□□□ -0.32
CSMD2-207ENST00000465819 SEPT14Q6ZU15 432 aa13.07□□□□□ -0.32
CSMD2-207ENST00000465819 ZNF589Q86UQ0 364 aaPredicted RBP13.07□□□□□ -0.32
CSMD2-207ENST00000465819 C7orf31Q8N865 590 aa13.07□□□□□ -0.32
CSMD2-207ENST00000465819 FBXO22Q8NEZ5 403 aa13.07□□□□□ -0.32
CSMD2-207ENST00000465819 UIMC1Q96RL1 719 aa13.07□□□□□ -0.32
CSMD2-207ENST00000465819 TCP11L1Q9NUJ3 509 aa13.07□□□□□ -0.32
CSMD2-207ENST00000465819 HDAC6Q9UBN7 1215 aa13.07□□□□□ -0.32
CSMD2-207ENST00000465819 PIEZO1Q92508 2521 aa13.07□□□□□ -0.32
CSMD2-207ENST00000465819 GRXCR2A6NFK2 248 aa13.06□□□□□ -0.32
CSMD2-207ENST00000465819 MRE11P49959 708 aa13.06□□□□□ -0.32
CSMD2-207ENST00000465819 PTK7Q13308 1070 aa13.06□□□□□ -0.32
CSMD2-207ENST00000465819 DGKDQ16760 1214 aa13.06□□□□□ -0.32
CSMD2-207ENST00000465819 PUS10Q3MIT2 529 aaKnown RBP13.06□□□□□ -0.32
CSMD2-207ENST00000465819 USH1GQ495M9 461 aa13.06□□□□□ -0.32
CSMD2-207ENST00000465819 CHST3Q7LGC8 479 aa13.06□□□□□ -0.32
CSMD2-207ENST00000465819 EVI5LQ96CN4 794 aa13.06□□□□□ -0.32
CSMD2-207ENST00000465819 MRPL38Q96DV4 380 aaKnown RBP13.06□□□□□ -0.32
CSMD2-207ENST00000465819 C17orf80Q9BSJ5 609 aa13.06□□□□□ -0.32
CSMD2-207ENST00000465819 ALG1Q9BT22 464 aa13.06□□□□□ -0.32
CSMD2-207ENST00000465819 KATNAL1Q9BW62 490 aa13.06□□□□□ -0.32
CSMD2-207ENST00000465819 LNPKQ9C0E8 428 aa13.06□□□□□ -0.32
CSMD2-207ENST00000465819 RWDD1Q9H446 243 aaPredicted RBP13.06□□□□□ -0.32
CSMD2-207ENST00000465819 INSL6Q9Y581 213 aa13.06□□□□□ -0.32
CSMD2-207ENST00000465819 DCXO43602 365 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 LGR5O75473 907 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 FGAP02671 866 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 SNHG28P0DPA3 235 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 PSEN2P49810 448 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 NMIQ13287 307 aaPredicted RBP13.05□□□□□ -0.32
CSMD2-207ENST00000465819 MFSD10Q14728 455 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 ALX1Q15699 326 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 PTPROQ16827 1216 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 TRIM71Q2Q1W2 868 aaKnown RBP13.05□□□□□ -0.32
CSMD2-207ENST00000465819 TIGD5Q53EQ6 642 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 ZNF618Q5T7W0 954 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 TRAF7Q6Q0C0 670 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.05□□□□□ -0.32
CSMD2-207ENST00000465819 RGS22Q8NE09 1264 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 NEK9Q8TD19 979 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 WNT8BQ93098 351 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 CTNNA3Q9UI47 895 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 MYH7BA7E2Y1 1941 aa13.05□□□□□ -0.32
CSMD2-207ENST00000465819 NLRC5Q86WI3 1866 aa13.04□□□□□ -0.32
CSMD2-207ENST00000465819 H3BQ06 376 aaPredicted RBP13.04□□□□□ -0.32
CSMD2-207ENST00000465819 RBAK-RBAKDNI3L0D1 243 aa13.04□□□□□ -0.32
CSMD2-207ENST00000465819 F2P00734 622 aa13.04□□□□□ -0.32
CSMD2-207ENST00000465819 AMHP03971 560 aa13.04□□□□□ -0.32
CSMD2-207ENST00000465819 NHLH1Q02575 133 aa13.04□□□□□ -0.32
CSMD2-207ENST00000465819 MBTPS1Q14703 1052 aa13.04□□□□□ -0.32
CSMD2-207ENST00000465819 KIAA0753Q2KHM9 967 aa13.04□□□□□ -0.32
CSMD2-207ENST00000465819 MYOCDQ8IZQ8 938 aa13.04□□□□□ -0.32
CSMD2-207ENST00000465819 SP7Q8TDD2 431 aaPredicted RBP13.04□□□□□ -0.32
CSMD2-207ENST00000465819 SYTL5Q8TDW5 730 aaPredicted RBP13.04□□□□□ -0.32
CSMD2-207ENST00000465819 NSUN6Q8TEA1 469 aaKnown RBP13.04□□□□□ -0.32
CSMD2-207ENST00000465819 SAMD11Q96NU1 681 aa13.04□□□□□ -0.32
CSMD2-207ENST00000465819 TAAR1Q96RJ0 339 aa13.04□□□□□ -0.32
CSMD2-207ENST00000465819 MAF1Q9H063 256 aa13.04□□□□□ -0.32
CSMD2-207ENST00000465819 KCNH6Q9H252 994 aa13.04□□□□□ -0.32
CSMD2-207ENST00000465819 HELLSQ9NRZ9 838 aa13.04□□□□□ -0.32
CSMD2-207ENST00000465819 COL20A1Q9P218 1284 aa13.04□□□□□ -0.32
CSMD2-207ENST00000465819 EMSYQ7Z589 1322 aa13.04□□□□□ -0.32
CSMD2-207ENST00000465819 MYH6P13533 1939 aa13.03□□□□□ -0.32
CSMD2-207ENST00000465819 HAS3O00219 553 aa13.03□□□□□ -0.32
CSMD2-207ENST00000465819 ZNF286BP0CG31 522 aa13.03□□□□□ -0.32
CSMD2-207ENST00000465819 HSPD1P10809 573 aaKnown RBP13.03□□□□□ -0.32
CSMD2-207ENST00000465819 HTRA4P83105 476 aaPredicted RBP13.03□□□□□ -0.32
CSMD2-207ENST00000465819 NUCB1Q02818 461 aa13.03□□□□□ -0.32
CSMD2-207ENST00000465819 MKRN4PQ13434 485 aaPredicted RBP13.03□□□□□ -0.32
CSMD2-207ENST00000465819 STXBP2Q15833 593 aa13.03□□□□□ -0.32
CSMD2-207ENST00000465819 EPC2Q52LR7 807 aa13.03□□□□□ -0.32
CSMD2-207ENST00000465819 GPATCH4Q5T3I0 446 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms