RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 UBAC1Q9BSL1 405 aa8.9□□□□□ -0.98
VPS8-218ENST00000465818 TSEN34Q9BSV6 310 aaKnown RBP8.9□□□□□ -0.98
VPS8-218ENST00000465818 CHRDQ9H2X0 955 aa8.9□□□□□ -0.98
VPS8-218ENST00000465818 ZFYVE28Q9HCC9 887 aa8.9□□□□□ -0.98
VPS8-218ENST00000465818 POLMQ9NP87 494 aaPredicted RBP8.9□□□□□ -0.98
VPS8-218ENST00000465818 ZSWIM5Q9P217 1185 aa8.9□□□□□ -0.98
VPS8-218ENST00000465818 ZBTB21Q9ULJ3 1066 aa8.9□□□□□ -0.98
VPS8-218ENST00000465818 PCDHGB7Q9Y5F8 929 aa8.9□□□□□ -0.98
VPS8-218ENST00000465818 IGKV6D-41A0A0C4DH26 115 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 SH2B2O14492 632 aaPredicted RBP8.89□□□□□ -0.99
VPS8-218ENST00000465818 IFIT3O14879 490 aaKnown RBP8.89□□□□□ -0.99
VPS8-218ENST00000465818 PCSK2P16519 638 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 CAP2P40123 477 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 NT5C2P49902 561 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 EXOSC10Q01780 885 aaKnown RBP8.89□□□□□ -0.99
VPS8-218ENST00000465818 ICA1Q05084 483 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 VGLL4Q14135 290 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 SEPT2Q15019 361 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 SART3Q15020 963 aaKnown RBP8.89□□□□□ -0.99
VPS8-218ENST00000465818 TMEM67Q5HYA8 995 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 MEI1Q5TIA1 1274 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 TMEM179Q6ZVK1 233 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 PRICKLE2Q7Z3G6 844 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 CCDC84Q86UT8 332 aaPredicted RBP8.89□□□□□ -0.99
VPS8-218ENST00000465818 IQCA1Q86XH1 822 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 ENAHQ8N8S7 591 aaPredicted RBP8.89□□□□□ -0.99
VPS8-218ENST00000465818 SMC1BQ8NDV3 1235 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.89□□□□□ -0.99
VPS8-218ENST00000465818 NEDD1Q8NHV4 660 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 CEP95Q96GE4 821 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 LY9Q9HBG7 655 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 SRA1Q9HD15 236 aaKnown RBP8.89□□□□□ -0.99
VPS8-218ENST00000465818 PDRG1Q9NUG6 133 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 ZNF112Q9UJU3 913 aa8.89□□□□□ -0.99
VPS8-218ENST00000465818 DDX41Q9UJV9 622 aaKnown RBP8.89□□□□□ -0.99
VPS8-218ENST00000465818 ANGEL1Q9UNK9 670 aaKnown RBP8.89□□□□□ -0.99
VPS8-218ENST00000465818 V9GY48 417 aaPredicted RBP8.89□□□□□ -0.99
VPS8-218ENST00000465818 CELF2O95319 508 aaKnown RBP8.88□□□□□ -0.99
VPS8-218ENST00000465818 ASNSP08243 561 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 GUCY1A2P33402 732 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 AK2P54819 239 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 TOB2Q14106 344 aaPredicted RBP8.88□□□□□ -0.99
VPS8-218ENST00000465818 WTAPQ15007 396 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 RAB3GAP1Q15042 981 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 SEC23AQ15436 765 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 SF3A1Q15459 793 aaKnown RBP8.88□□□□□ -0.99
VPS8-218ENST00000465818 NOL9Q5SY16 702 aaKnown RBP8.88□□□□□ -0.99
VPS8-218ENST00000465818 LRRC69Q6ZNQ3 347 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 Q6ZUG5 572 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 SCYL3Q8IZE3 742 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 LRRC47Q8N1G4 583 aaKnown RBP8.88□□□□□ -0.99
VPS8-218ENST00000465818 SLC43A3Q8NBI5 491 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 BRF1Q92994 677 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 ZKSCAN4Q969J2 545 aaPredicted RBP8.88□□□□□ -0.99
VPS8-218ENST00000465818 TMEM87BQ96K49 555 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 C12orf49Q9H741 205 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 SENP2Q9HC62 589 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 CAPN10Q9HC96 672 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 IL17RBQ9NRM6 502 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 STX8Q9UNK0 236 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.88□□□□□ -0.99
VPS8-218ENST00000465818 SNCAIPQ9Y6H5 919 aa8.88□□□□□ -0.99
VPS8-218ENST00000465818 BAZ2BQ9UIF8 2168 aaKnown RBP8.88□□□□□ -0.99
VPS8-218ENST00000465818 COL11A1P12107 1806 aaPredicted RBP8.87□□□□□ -0.99
VPS8-218ENST00000465818 PASKQ96RG2 1323 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 ERICH2A1L162 156 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 GOLGA8BA8MQT2 603 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 CTNND1O60716 968 aaKnown RBP8.87□□□□□ -0.99
VPS8-218ENST00000465818 USP2O75604 605 aaPredicted RBP8.87□□□□□ -0.99
VPS8-218ENST00000465818 EIF4BP23588 611 aaKnown RBP8.87□□□□□ -0.99
VPS8-218ENST00000465818 IREB2P48200 963 aaKnown RBP8.87□□□□□ -0.99
VPS8-218ENST00000465818 ARSDP51689 593 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 APOBRQ0VD83 1088 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 IFIT1BQ5T764 474 aaKnown RBP8.87□□□□□ -0.99
VPS8-218ENST00000465818 RCSD1Q6JBY9 416 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.87□□□□□ -0.99
VPS8-218ENST00000465818 RASGRP2Q7LDG7 609 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 ARMC9Q7Z3E5 817 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 RAB11FIP4Q86YS3 637 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 CMTR1Q8N1G2 835 aaKnown RBP8.87□□□□□ -0.99
VPS8-218ENST00000465818 IGDCC4Q8TDY8 1250 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 CLMNQ96JQ2 1002 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 FRMD6Q96NE9 622 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 AGXT2Q9BYV1 514 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 GBA2Q9HCG7 927 aaPredicted RBP8.87□□□□□ -0.99
VPS8-218ENST00000465818 CABP5Q9NP86 173 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 PICK1Q9NRD5 415 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 TCP11L1Q9NUJ3 509 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 MTMR4Q9NYA4 1195 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 FAM13BQ9NYF5 915 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 CNTN3Q9P232 1028 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 CSADQ9Y600 493 aa8.87□□□□□ -0.99
VPS8-218ENST00000465818 GPC6Q9Y625 555 aaPredicted RBP8.87□□□□□ -0.99
VPS8-218ENST00000465818 RBBP6Q7Z6E9 1792 aaKnown RBP8.86□□□□□ -0.99
VPS8-218ENST00000465818 A0A0G2JMZ2 1700 aa8.86□□□□□ -0.99
VPS8-218ENST00000465818 RLFQ13129 1914 aa8.86□□□□□ -0.99
VPS8-218ENST00000465818 KLF18A0A0U1RQI7 1052 aa8.86□□□□□ -0.99
VPS8-218ENST00000465818 UBE2Q2LH0YL09 131 aa8.86□□□□□ -0.99
VPS8-218ENST00000465818 TOMM70O94826 608 aa8.86□□□□□ -0.99
VPS8-218ENST00000465818 LARGE1O95461 756 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms