RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 MAP3K14Q99558 947 aa23.31■■□□□ 1.32
COL2A1-203ENST00000465743 ALDH8A1Q9H2A2 487 aaPredicted RBP23.31■■□□□ 1.32
COL2A1-203ENST00000465743 GTF3C3Q9Y5Q9 886 aa23.31■■□□□ 1.32
COL2A1-203ENST00000465743 SCN5AQ14524 2016 aa23.31■■□□□ 1.32
COL2A1-203ENST00000465743 GH1P01241 217 aa23.3■■□□□ 1.32
COL2A1-203ENST00000465743 MMP3P08254 477 aa23.3■■□□□ 1.32
COL2A1-203ENST00000465743 ACRP10323 421 aa23.3■■□□□ 1.32
COL2A1-203ENST00000465743 CHMP4BP1P59074 171 aa23.3■■□□□ 1.32
COL2A1-203ENST00000465743 CCDC82Q8N4S0 544 aa23.3■■□□□ 1.32
COL2A1-203ENST00000465743 GPKOWQ92917 476 aaPredicted RBP eCLIP23.3■■□□□ 1.32
COL2A1-203ENST00000465743 RRP36Q96EU6 259 aaKnown RBP23.3■■□□□ 1.32
COL2A1-203ENST00000465743 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.3■■□□□ 1.32
COL2A1-203ENST00000465743 HIPK3Q9H422 1215 aa23.3■■□□□ 1.32
COL2A1-203ENST00000465743 SLC12A7Q9Y666 1083 aa23.3■■□□□ 1.32
COL2A1-203ENST00000465743 MRVI1Q9Y6F6 885 aa23.3■■□□□ 1.32
COL2A1-203ENST00000465743 TANC1Q9C0D5 1861 aa23.3■■□□□ 1.32
COL2A1-203ENST00000465743 EIF3JO75822 258 aaKnown RBP23.29■■□□□ 1.32
COL2A1-203ENST00000465743 CYP2C9P11712 490 aa23.29■■□□□ 1.32
COL2A1-203ENST00000465743 CPA1P15085 419 aa23.29■■□□□ 1.32
COL2A1-203ENST00000465743 NBPF20Q3BBV1 942 aa23.29■■□□□ 1.32
COL2A1-203ENST00000465743 FAM47CQ5HY64 1035 aa23.29■■□□□ 1.32
COL2A1-203ENST00000465743 GPR153Q6NV75 609 aa23.29■■□□□ 1.32
COL2A1-203ENST00000465743 C16orf59Q7L2K0 433 aa23.29■■□□□ 1.32
COL2A1-203ENST00000465743 FAM161BQ96MY7 647 aa23.29■■□□□ 1.32
COL2A1-203ENST00000465743 NOC4LQ9BVI4 516 aaKnown RBP23.29■■□□□ 1.32
COL2A1-203ENST00000465743 WNT8AQ9H1J5 351 aa23.29■■□□□ 1.32
COL2A1-203ENST00000465743 DDX41Q9UJV9 622 aaKnown RBP23.29■■□□□ 1.32
COL2A1-203ENST00000465743 RBAK-RBAKDNI3L0D1 243 aa23.28■■□□□ 1.32
COL2A1-203ENST00000465743 EPB41L2O43491 1005 aaKnown RBP23.28■■□□□ 1.32
COL2A1-203ENST00000465743 CCL23P55773 120 aa23.28■■□□□ 1.32
COL2A1-203ENST00000465743 BRDTQ58F21 947 aaPredicted RBP23.28■■□□□ 1.32
COL2A1-203ENST00000465743 TMTC3Q6ZXV5 915 aa23.28■■□□□ 1.32
COL2A1-203ENST00000465743 SGMS1Q86VZ5 419 aa23.28■■□□□ 1.32
COL2A1-203ENST00000465743 SEC63Q9UGP8 760 aaKnown RBP23.28■■□□□ 1.32
COL2A1-203ENST00000465743 BRPF3Q9ULD4 1205 aa23.28■■□□□ 1.32
COL2A1-203ENST00000465743 EIF5BO60841 1220 aaKnown RBP23.27■■□□□ 1.32
COL2A1-203ENST00000465743 EXOSC10Q01780 885 aaKnown RBP23.27■■□□□ 1.32
COL2A1-203ENST00000465743 FAM109BQ6ICB4 259 aaPredicted RBP23.27■■□□□ 1.32
COL2A1-203ENST00000465743 APOA5Q6Q788 366 aa23.27■■□□□ 1.32
COL2A1-203ENST00000465743 USP17L6PQ6QN14 398 aa23.27■■□□□ 1.32
COL2A1-203ENST00000465743 TMTC2Q8N394 836 aa23.27■■□□□ 1.32
COL2A1-203ENST00000465743 MTMR10Q9NXD2 777 aa23.27■■□□□ 1.32
COL2A1-203ENST00000465743 MAP3K20Q9NYL2 800 aaKnown RBP23.27■■□□□ 1.32
COL2A1-203ENST00000465743 FRMPD4Q14CM0 1322 aa23.27■■□□□ 1.32
COL2A1-203ENST00000465743 GBF1Q92538 1859 aa23.26■■□□□ 1.31
COL2A1-203ENST00000465743 ZNF286BP0CG31 522 aa23.26■■□□□ 1.31
COL2A1-203ENST00000465743 CALM1P0DP23 149 aa23.26■■□□□ 1.31
COL2A1-203ENST00000465743 CALM2P0DP24 149 aa23.26■■□□□ 1.31
COL2A1-203ENST00000465743 CALM3P0DP25 149 aa23.26■■□□□ 1.31
COL2A1-203ENST00000465743 CCND2P30279 289 aa23.26■■□□□ 1.31
COL2A1-203ENST00000465743 TRAF1Q13077 416 aa23.26■■□□□ 1.31
COL2A1-203ENST00000465743 PPIGQ13427 754 aaKnown RBP eCLIP23.26■■□□□ 1.31
COL2A1-203ENST00000465743 TMEM240Q5SV17 173 aa23.26■■□□□ 1.31
COL2A1-203ENST00000465743 VSIG10LQ86VR7 867 aa23.26■■□□□ 1.31
COL2A1-203ENST00000465743 KAT2BQ92831 832 aa23.26■■□□□ 1.31
COL2A1-203ENST00000465743 LZTS2Q9BRK4 669 aa23.26■■□□□ 1.31
COL2A1-203ENST00000465743 CNTNAP5Q8WYK1 1306 aa23.26■■□□□ 1.31
COL2A1-203ENST00000465743 UBA1P22314 1058 aaKnown RBP23.25■■□□□ 1.31
COL2A1-203ENST00000465743 GNAQP50148 359 aa23.25■■□□□ 1.31
COL2A1-203ENST00000465743 MRPS9P82933 396 aaKnown RBP23.25■■□□□ 1.31
COL2A1-203ENST00000465743 SP2Q02086 613 aa23.25■■□□□ 1.31
COL2A1-203ENST00000465743 KRT32Q14532 448 aa23.25■■□□□ 1.31
COL2A1-203ENST00000465743 DHX32Q7L7V1 743 aaKnown RBP23.25■■□□□ 1.31
COL2A1-203ENST00000465743 TMEM199Q8N511 208 aa23.25■■□□□ 1.31
COL2A1-203ENST00000465743 FANCBQ8NB91 859 aa23.25■■□□□ 1.31
COL2A1-203ENST00000465743 SCLYQ96I15 445 aa23.25■■□□□ 1.31
COL2A1-203ENST00000465743 BCAS3Q9H6U6 928 aa23.25■■□□□ 1.31
COL2A1-203ENST00000465743 TRIP12Q14669 1992 aaPredicted RBP23.24■■□□□ 1.31
COL2A1-203ENST00000465743 MEIS2O14770 477 aa23.24■■□□□ 1.31
COL2A1-203ENST00000465743 SMARCA1P28370 1054 aa23.24■■□□□ 1.31
COL2A1-203ENST00000465743 HSPA4P34932 840 aa23.24■■□□□ 1.31
COL2A1-203ENST00000465743 UBE2SQ16763 222 aa23.24■■□□□ 1.31
COL2A1-203ENST00000465743 TSGA10IPQ3SY00 556 aa23.24■■□□□ 1.31
COL2A1-203ENST00000465743 SAMD3Q8N6K7 520 aa23.24■■□□□ 1.31
COL2A1-203ENST00000465743 GUCD1Q96NT3 240 aa23.24■■□□□ 1.31
COL2A1-203ENST00000465743 KPNA6O60684 536 aa23.23■■□□□ 1.31
COL2A1-203ENST00000465743 GGPS1O95749 300 aa23.23■■□□□ 1.31
COL2A1-203ENST00000465743 ZNF365Q70YC5 407 aa23.23■■□□□ 1.31
COL2A1-203ENST00000465743 DHX37Q8IY37 1157 aaKnown RBP23.23■■□□□ 1.31
COL2A1-203ENST00000465743 SMARCC2Q8TAQ2 1214 aa23.23■■□□□ 1.31
COL2A1-203ENST00000465743 VWCEQ96DN2 955 aa23.23■■□□□ 1.31
COL2A1-203ENST00000465743 JAKMIP1Q96N16 626 aaKnown RBP23.23■■□□□ 1.31
COL2A1-203ENST00000465743 SEZ6LQ9BYH1 1024 aa23.23■■□□□ 1.31
COL2A1-203ENST00000465743 SNX14Q9Y5W7 946 aa23.23■■□□□ 1.31
COL2A1-203ENST00000465743 KLF18A0A0U1RQI7 1052 aa23.22■■□□□ 1.31
COL2A1-203ENST00000465743 SMAD3P84022 425 aaKnown RBP23.22■■□□□ 1.31
COL2A1-203ENST00000465743 SEMA3FQ13275 785 aa23.22■■□□□ 1.31
COL2A1-203ENST00000465743 RTN1Q16799 776 aa23.22■■□□□ 1.31
COL2A1-203ENST00000465743 HSDL1Q3SXM5 330 aa23.22■■□□□ 1.31
COL2A1-203ENST00000465743 NFRKBQ6P4R8 1299 aa23.22■■□□□ 1.31
COL2A1-203ENST00000465743 HEATR3Q7Z4Q2 680 aa23.22■■□□□ 1.31
COL2A1-203ENST00000465743 PPTC7Q8NI37 304 aa23.22■■□□□ 1.31
COL2A1-203ENST00000465743 KCNB2Q92953 911 aa23.22■■□□□ 1.31
COL2A1-203ENST00000465743 EMID1Q96A84 441 aaPredicted RBP23.22■■□□□ 1.31
COL2A1-203ENST00000465743 IL23AQ9NPF7 189 aa23.22■■□□□ 1.31
COL2A1-203ENST00000465743 RTEL1Q9NZ71 1219 aa23.22■■□□□ 1.31
COL2A1-203ENST00000465743 CXXC1Q9P0U4 656 aaPredicted RBP23.22■■□□□ 1.31
COL2A1-203ENST00000465743 GOLGA8AA7E2F4 631 aa23.21■■□□□ 1.31
COL2A1-203ENST00000465743 GOLGA8BA8MQT2 603 aa23.21■■□□□ 1.31
COL2A1-203ENST00000465743 GRXCR1A8MXD5 290 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms