RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 GPKOWQ92917 476 aaPredicted RBP eCLIP19.87■□□□□ 0.77
TOM1-213ENST00000465529 MTA3Q9BTC8 594 aa19.87■□□□□ 0.77
TOM1-213ENST00000465529 NOC4LQ9BVI4 516 aaKnown RBP19.87■□□□□ 0.77
TOM1-213ENST00000465529 SPZ1Q9BXG8 430 aa19.87■□□□□ 0.77
TOM1-213ENST00000465529 WNT8AQ9H1J5 351 aa19.87■□□□□ 0.77
TOM1-213ENST00000465529 DDX41Q9UJV9 622 aaKnown RBP19.87■□□□□ 0.77
TOM1-213ENST00000465529 EIF3JO75822 258 aaKnown RBP19.86■□□□□ 0.77
TOM1-213ENST00000465529 GH1P01241 217 aa19.86■□□□□ 0.77
TOM1-213ENST00000465529 MMP3P08254 477 aa19.86■□□□□ 0.77
TOM1-213ENST00000465529 FAM47CQ5HY64 1035 aa19.86■□□□□ 0.77
TOM1-213ENST00000465529 TMEM240Q5SV17 173 aa19.86■□□□□ 0.77
TOM1-213ENST00000465529 FAM109BQ6ICB4 259 aaPredicted RBP19.86■□□□□ 0.77
TOM1-213ENST00000465529 MAP3K14Q99558 947 aa19.86■□□□□ 0.77
TOM1-213ENST00000465529 MRVI1Q9Y6F6 885 aa19.86■□□□□ 0.77
TOM1-213ENST00000465529 KIF5BP33176 963 aa19.85■□□□□ 0.77
TOM1-213ENST00000465529 LIFRP42702 1097 aa19.85■□□□□ 0.77
TOM1-213ENST00000465529 PPIGQ13427 754 aaKnown RBP eCLIP19.85■□□□□ 0.772e-7■□□□□ 8.5
TOM1-213ENST00000465529 BRDTQ58F21 947 aaPredicted RBP19.85■□□□□ 0.77
TOM1-213ENST00000465529 MICU3Q86XE3 530 aa19.85■□□□□ 0.77
TOM1-213ENST00000465529 CCDC82Q8N4S0 544 aa19.85■□□□□ 0.77
TOM1-213ENST00000465529 TMEM199Q8N511 208 aa19.85■□□□□ 0.77
TOM1-213ENST00000465529 RRP36Q96EU6 259 aaKnown RBP19.85■□□□□ 0.77
TOM1-213ENST00000465529 SCLYQ96I15 445 aa19.85■□□□□ 0.77
TOM1-213ENST00000465529 GUCD1Q96NT3 240 aa19.85■□□□□ 0.77
TOM1-213ENST00000465529 NEK1Q96PY6 1258 aa19.85■□□□□ 0.77
TOM1-213ENST00000465529 USP17L6PQ6QN14 398 aa19.84■□□□□ 0.77
TOM1-213ENST00000465529 ZNF365Q70YC5 407 aa19.84■□□□□ 0.77
TOM1-213ENST00000465529 VSIG10LQ86VR7 867 aa19.84■□□□□ 0.77
TOM1-213ENST00000465529 KAT2BQ92831 832 aa19.84■□□□□ 0.77
TOM1-213ENST00000465529 MAP3K20Q9NYL2 800 aaKnown RBP19.84■□□□□ 0.77
TOM1-213ENST00000465529 SLC12A7Q9Y666 1083 aa19.84■□□□□ 0.77
TOM1-213ENST00000465529 CPA1P15085 419 aa19.83■□□□□ 0.77
TOM1-213ENST00000465529 EXOSC10Q01780 885 aaKnown RBP19.83■□□□□ 0.77
TOM1-213ENST00000465529 SP2Q02086 613 aa19.83■□□□□ 0.77
TOM1-213ENST00000465529 RNF20Q5VTR2 975 aa19.83■□□□□ 0.77
TOM1-213ENST00000465529 TMTC2Q8N394 836 aa19.83■□□□□ 0.77
TOM1-213ENST00000465529 VWCEQ96DN2 955 aa19.83■□□□□ 0.77
TOM1-213ENST00000465529 TTYH1Q9H313 450 aaPredicted RBP19.83■□□□□ 0.77
TOM1-213ENST00000465529 BCAS3Q9H6U6 928 aa19.83■□□□□ 0.77
TOM1-213ENST00000465529 GBF1Q92538 1859 aa19.83■□□□□ 0.76
TOM1-213ENST00000465529 TRIP12Q14669 1992 aaPredicted RBP19.83■□□□□ 0.76
TOM1-213ENST00000465529 TANC1Q9C0D5 1861 aa19.82■□□□□ 0.76
TOM1-213ENST00000465529 GRXCR1A8MXD5 290 aa19.82■□□□□ 0.76
TOM1-213ENST00000465529 ZNF286BP0CG31 522 aa19.82■□□□□ 0.76
TOM1-213ENST00000465529 CCND2P30279 289 aa19.82■□□□□ 0.76
TOM1-213ENST00000465529 MRPS9P82933 396 aaKnown RBP19.82■□□□□ 0.76
TOM1-213ENST00000465529 SMAD3P84022 425 aaKnown RBP19.82■□□□□ 0.76
TOM1-213ENST00000465529 ZNF697Q5TEC3 545 aa19.82■□□□□ 0.76
TOM1-213ENST00000465529 TMTC3Q6ZXV5 915 aa19.82■□□□□ 0.76
TOM1-213ENST00000465529 SGMS1Q86VZ5 419 aa19.82■□□□□ 0.76
TOM1-213ENST00000465529 SAMD3Q8N6K7 520 aa19.82■□□□□ 0.76
TOM1-213ENST00000465529 SEZ6LQ9BYH1 1024 aa19.82■□□□□ 0.76
TOM1-213ENST00000465529 IL23AQ9NPF7 189 aa19.82■□□□□ 0.76
TOM1-213ENST00000465529 SEC63Q9UGP8 760 aaKnown RBP19.82■□□□□ 0.76
TOM1-213ENST00000465529 BRPF3Q9ULD4 1205 aa19.82■□□□□ 0.76
TOM1-213ENST00000465529 FRMPD4Q14CM0 1322 aa19.81■□□□□ 0.76
TOM1-213ENST00000465529 MEIS2O14770 477 aa19.81■□□□□ 0.76
TOM1-213ENST00000465529 KPNA6O60684 536 aa19.81■□□□□ 0.76
TOM1-213ENST00000465529 GGPS1O95749 300 aa19.81■□□□□ 0.76
TOM1-213ENST00000465529 UBA1P22314 1058 aaKnown RBP19.81■□□□□ 0.76
TOM1-213ENST00000465529 GNAQP50148 359 aa19.81■□□□□ 0.76
TOM1-213ENST00000465529 TRAF1Q13077 416 aa19.81■□□□□ 0.76
TOM1-213ENST00000465529 APOA5Q6Q788 366 aa19.81■□□□□ 0.76
TOM1-213ENST00000465529 DHX37Q8IY37 1157 aaKnown RBP19.81■□□□□ 0.76
TOM1-213ENST00000465529 FANCBQ8NB91 859 aa19.81■□□□□ 0.76
TOM1-213ENST00000465529 LZTS2Q9BRK4 669 aa19.81■□□□□ 0.76
TOM1-213ENST00000465529 RTEL1Q9NZ71 1219 aa19.81■□□□□ 0.76
TOM1-213ENST00000465529 CXXC1Q9P0U4 656 aaPredicted RBP19.81■□□□□ 0.76
TOM1-213ENST00000465529 CDH23Q9H251 3354 aa19.81■□□□□ 0.76
TOM1-213ENST00000465529 CALM1P0DP23 149 aa19.8■□□□□ 0.76
TOM1-213ENST00000465529 CALM2P0DP24 149 aa19.8■□□□□ 0.76
TOM1-213ENST00000465529 CALM3P0DP25 149 aa19.8■□□□□ 0.76
TOM1-213ENST00000465529 SMARCA1P28370 1054 aa19.8■□□□□ 0.76
TOM1-213ENST00000465529 SEMA3FQ13275 785 aa19.8■□□□□ 0.76
TOM1-213ENST00000465529 HSDL1Q3SXM5 330 aa19.8■□□□□ 0.76
TOM1-213ENST00000465529 TSGA10IPQ3SY00 556 aa19.8■□□□□ 0.76
TOM1-213ENST00000465529 RASIP1Q5U651 963 aa19.8■□□□□ 0.76
TOM1-213ENST00000465529 NFRKBQ6P4R8 1299 aa19.8■□□□□ 0.76
TOM1-213ENST00000465529 DHX32Q7L7V1 743 aaKnown RBP19.8■□□□□ 0.76
TOM1-213ENST00000465529 SMARCC2Q8TAQ2 1214 aa19.8■□□□□ 0.76
TOM1-213ENST00000465529 EMID1Q96A84 441 aaPredicted RBP19.8■□□□□ 0.76
TOM1-213ENST00000465529 CTAGE1Q96RT6 745 aa19.8■□□□□ 0.76
TOM1-213ENST00000465529 ALG1Q9BT22 464 aa19.8■□□□□ 0.76
TOM1-213ENST00000465529 CNTNAP5Q8WYK1 1306 aa19.79■□□□□ 0.76
TOM1-213ENST00000465529 PBX2P40425 430 aa19.79■□□□□ 0.76
TOM1-213ENST00000465529 LAMC2Q13753 1193 aa19.79■□□□□ 0.76
TOM1-213ENST00000465529 DGKDQ16760 1214 aa19.79■□□□□ 0.76
TOM1-213ENST00000465529 UBE2SQ16763 222 aa19.79■□□□□ 0.76
TOM1-213ENST00000465529 CELF3Q5SZQ8 465 aaKnown RBP19.79■□□□□ 0.76
TOM1-213ENST00000465529 MYSM1Q5VVJ2 828 aa19.79■□□□□ 0.76
TOM1-213ENST00000465529 GDF6Q6KF10 455 aaPredicted RBP19.79■□□□□ 0.76
TOM1-213ENST00000465529 PSRC1Q6PGN9 363 aaPredicted RBP19.79■□□□□ 0.76
TOM1-213ENST00000465529 OTOP2Q7RTS6 562 aa19.79■□□□□ 0.76
TOM1-213ENST00000465529 PPTC7Q8NI37 304 aa19.79■□□□□ 0.76
TOM1-213ENST00000465529 SEMA6BQ9H3T3 888 aa19.79■□□□□ 0.76
TOM1-213ENST00000465529 STXBP5LQ9Y2K9 1186 aa19.79■□□□□ 0.76
TOM1-213ENST00000465529 TELO2Q9Y4R8 837 aa19.79■□□□□ 0.76
TOM1-213ENST00000465529 TET1Q8NFU7 2136 aa19.78■□□□□ 0.76
TOM1-213ENST00000465529 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.78■□□□□ 0.76
TOM1-213ENST00000465529 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms