RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 PTGISQ16647 500 aa16.04■□□□□ 0.16
RPP40-203ENST00000464646 CASC1Q6TDU7 716 aa16.04■□□□□ 0.16
RPP40-203ENST00000464646 NFXL1Q6ZNB6 911 aa16.04■□□□□ 0.16
RPP40-203ENST00000464646 DHX37Q8IY37 1157 aaKnown RBP16.04■□□□□ 0.16
RPP40-203ENST00000464646 ZFP91Q96JP5 570 aaPredicted RBP16.04■□□□□ 0.16
RPP40-203ENST00000464646 PXMP2Q9NR77 195 aa16.04■□□□□ 0.16
RPP40-203ENST00000464646 SCN5AQ14524 2016 aa16.04■□□□□ 0.16
RPP40-203ENST00000464646 A6NJR5 290 aa16.03■□□□□ 0.16
RPP40-203ENST00000464646 GCOM1H8Y6P7 765 aaPredicted RBP16.03■□□□□ 0.16
RPP40-203ENST00000464646 POLR2MP0CAP2 368 aa16.03■□□□□ 0.16
RPP40-203ENST00000464646 TRAF1Q13077 416 aa16.03■□□□□ 0.16
RPP40-203ENST00000464646 BFSP2Q13515 415 aa16.03■□□□□ 0.16
RPP40-203ENST00000464646 GRM4Q14833 912 aa16.03■□□□□ 0.16
RPP40-203ENST00000464646 DGKDQ16760 1214 aa16.03■□□□□ 0.16
RPP40-203ENST00000464646 NFRKBQ6P4R8 1299 aa16.03■□□□□ 0.16
RPP40-203ENST00000464646 RNF216Q9NWF9 866 aaPredicted RBP16.03■□□□□ 0.16
RPP40-203ENST00000464646 TRIP12Q14669 1992 aaPredicted RBP16.03■□□□□ 0.16
RPP40-203ENST00000464646 GBF1Q92538 1859 aa16.03■□□□□ 0.16
RPP40-203ENST00000464646 PALM3A6NDB9 673 aaPredicted RBP16.02■□□□□ 0.16
RPP40-203ENST00000464646 SGSM2O43147 1006 aa16.02■□□□□ 0.16
RPP40-203ENST00000464646 EIF3JO75822 258 aaKnown RBP16.02■□□□□ 0.16
RPP40-203ENST00000464646 CCDC85BQ15834 202 aaPredicted RBP16.02■□□□□ 0.16
RPP40-203ENST00000464646 MICALL1Q8N3F8 863 aa16.02■□□□□ 0.16
RPP40-203ENST00000464646 CCDC155Q8N6L0 562 aa16.02■□□□□ 0.16
RPP40-203ENST00000464646 C7orf31Q8N865 590 aa16.02■□□□□ 0.16
RPP40-203ENST00000464646 MAF1Q9H063 256 aa16.02■□□□□ 0.16
RPP40-203ENST00000464646 SENP2Q9HC62 589 aa16.02■□□□□ 0.16
RPP40-203ENST00000464646 RBM8AQ9Y5S9 174 aaKnown RBP16.02■□□□□ 0.16
RPP40-203ENST00000464646 SCN10AQ9Y5Y9 1956 aa16.02■□□□□ 0.15
RPP40-203ENST00000464646 ZNF286BP0CG31 522 aa16.01■□□□□ 0.15
RPP40-203ENST00000464646 ATP2A2P16615 1042 aaKnown RBP16.01■□□□□ 0.15
RPP40-203ENST00000464646 CCND2P30279 289 aa16.01■□□□□ 0.15
RPP40-203ENST00000464646 PTPN11Q06124 597 aaPredicted RBP16.01■□□□□ 0.15
RPP40-203ENST00000464646 ARHGAP1Q07960 439 aa16.01■□□□□ 0.15
RPP40-203ENST00000464646 LAMC2Q13753 1193 aa16.01■□□□□ 0.15
RPP40-203ENST00000464646 RASIP1Q5U651 963 aa16.01■□□□□ 0.15
RPP40-203ENST00000464646 PPP2R2DQ66LE6 453 aa16.01■□□□□ 0.15
RPP40-203ENST00000464646 CCDC62Q6P9F0 684 aa16.01■□□□□ 0.15
RPP40-203ENST00000464646 CTCFLQ8NI51 663 aaPredicted RBP16.01■□□□□ 0.15
RPP40-203ENST00000464646 MYL10Q9BUA6 226 aa16.01■□□□□ 0.15
RPP40-203ENST00000464646 COL25A1Q9BXS0 654 aaPredicted RBP16.01■□□□□ 0.15
RPP40-203ENST00000464646 MLXIPQ9HAP2 919 aa16.01■□□□□ 0.15
RPP40-203ENST00000464646 DDX41Q9UJV9 622 aaKnown RBP16.01■□□□□ 0.15
RPP40-203ENST00000464646 PNMA6FA0A0J9YX94 578 aa16■□□□□ 0.15
RPP40-203ENST00000464646 CCDC69A6NI79 296 aa16■□□□□ 0.15
RPP40-203ENST00000464646 PPP1R11O60927 126 aaPredicted RBP16■□□□□ 0.15
RPP40-203ENST00000464646 PFKMP08237 780 aa16■□□□□ 0.15
RPP40-203ENST00000464646 MYOGP15173 224 aa16■□□□□ 0.15
RPP40-203ENST00000464646 PSEN2P49810 448 aa16■□□□□ 0.15
RPP40-203ENST00000464646 HSD17B4P51659 736 aa16■□□□□ 0.15
RPP40-203ENST00000464646 PGM5Q15124 567 aa16■□□□□ 0.15
RPP40-203ENST00000464646 STOX1Q6ZVD7 989 aa16■□□□□ 0.15
RPP40-203ENST00000464646 SMARCC2Q8TAQ2 1214 aa16■□□□□ 0.15
RPP40-203ENST00000464646 CUL5Q93034 780 aa16■□□□□ 0.15
RPP40-203ENST00000464646 SPATA33Q96N06 139 aa16■□□□□ 0.15
RPP40-203ENST00000464646 PDCD2LQ9BRP1 358 aa16■□□□□ 0.15
RPP40-203ENST00000464646 KATNAL1Q9BW62 490 aa16■□□□□ 0.15
RPP40-203ENST00000464646 SEC63Q9UGP8 760 aaKnown RBP16■□□□□ 0.15
RPP40-203ENST00000464646 YBX2Q9Y2T7 364 aaKnown RBP16■□□□□ 0.15
RPP40-203ENST00000464646 TAF6LQ9Y6J9 622 aa16■□□□□ 0.15
RPP40-203ENST00000464646 GGPS1O95749 300 aa15.99■□□□□ 0.15
RPP40-203ENST00000464646 IQCF3P0C7M6 154 aa15.99■□□□□ 0.15
RPP40-203ENST00000464646 RFC2P35250 354 aa15.99■□□□□ 0.15
RPP40-203ENST00000464646 KCNJ6P48051 423 aa15.99■□□□□ 0.15
RPP40-203ENST00000464646 MFSD10Q14728 455 aa15.99■□□□□ 0.15
RPP40-203ENST00000464646 KIAA0753Q2KHM9 967 aa15.99■□□□□ 0.15
RPP40-203ENST00000464646 GDF6Q6KF10 455 aaPredicted RBP15.99■□□□□ 0.15
RPP40-203ENST00000464646 RRP36Q96EU6 259 aaKnown RBP15.99■□□□□ 0.15
RPP40-203ENST00000464646 RIOX1Q9H6W3 641 aa15.99■□□□□ 0.15
RPP40-203ENST00000464646 CERS4Q9HA82 394 aa15.99■□□□□ 0.15
RPP40-203ENST00000464646 MAP3K20Q9NYL2 800 aaKnown RBP15.99■□□□□ 0.15
RPP40-203ENST00000464646 HDAC6Q9UBN7 1215 aa15.99■□□□□ 0.15
RPP40-203ENST00000464646 KIF28PB7ZC32 967 aa15.98■□□□□ 0.15
RPP40-203ENST00000464646 OPLAHO14841 1288 aa15.98■□□□□ 0.15
RPP40-203ENST00000464646 PRC1O43663 620 aa15.98■□□□□ 0.15
RPP40-203ENST00000464646 KIF5BP33176 963 aa15.98■□□□□ 0.15
RPP40-203ENST00000464646 KCNV1Q6PIU1 500 aa15.98■□□□□ 0.15
RPP40-203ENST00000464646 RAB11FIP4Q86YS3 637 aa15.98■□□□□ 0.15
RPP40-203ENST00000464646 ZNF654Q8IZM8 581 aa15.98■□□□□ 0.15
RPP40-203ENST00000464646 MAP4K1Q92918 833 aa15.98■□□□□ 0.15
RPP40-203ENST00000464646 MTMR8Q96EF0 704 aa15.98■□□□□ 0.15
RPP40-203ENST00000464646 ANO2Q9NQ90 1003 aa15.98■□□□□ 0.15
RPP40-203ENST00000464646 RTEL1Q9NZ71 1219 aa15.98■□□□□ 0.15
RPP40-203ENST00000464646 PITPNM1O00562 1244 aa15.97■□□□□ 0.15
RPP40-203ENST00000464646 NOP56O00567 594 aaKnown RBP15.97■□□□□ 0.15
RPP40-203ENST00000464646 CYTH3O43739 400 aa15.97■□□□□ 0.15
RPP40-203ENST00000464646 RXRAP19793 462 aa15.97■□□□□ 0.15
RPP40-203ENST00000464646 SP4Q02446 784 aa15.97■□□□□ 0.15
RPP40-203ENST00000464646 SKIV2LQ15477 1246 aaKnown RBP15.97■□□□□ 0.15
RPP40-203ENST00000464646 GNPTABQ3T906 1256 aa15.97■□□□□ 0.15
RPP40-203ENST00000464646 SAMD3Q8N6K7 520 aa15.97■□□□□ 0.15
RPP40-203ENST00000464646 USP38Q8NB14 1042 aa15.97■□□□□ 0.15
RPP40-203ENST00000464646 IL31RAQ8NI17 732 aa15.97■□□□□ 0.15
RPP40-203ENST00000464646 PPTC7Q8NI37 304 aa15.97■□□□□ 0.15
RPP40-203ENST00000464646 CAGE1Q8TC20 777 aa15.97■□□□□ 0.15
RPP40-203ENST00000464646 KAT2BQ92831 832 aa15.97■□□□□ 0.15
RPP40-203ENST00000464646 ZBED2Q9BTP6 218 aa15.97■□□□□ 0.15
RPP40-203ENST00000464646 PCDHA11Q9Y5I1 949 aa15.97■□□□□ 0.15
RPP40-203ENST00000464646 MCM5P33992 734 aa15.96■□□□□ 0.15
RPP40-203ENST00000464646 ANTXR2P58335 489 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms