RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TRMT44Q8IYL2 757 aaKnown RBP16.35■□□□□ 0.21
COL5A1-205ENST00000464187 ENOX1Q8TC92 643 aaKnown RBP16.35■□□□□ 0.21
COL5A1-205ENST00000464187 TBC1D5Q92609 795 aa16.35■□□□□ 0.21
COL5A1-205ENST00000464187 SPDYE3A6NKU9 549 aa16.34■□□□□ 0.21
COL5A1-205ENST00000464187 SPDYE16A6NNV3 312 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-205ENST00000464187 ITGBL1O95965 494 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-205ENST00000464187 FOSP01100 380 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-205ENST00000464187 ALAS1P13196 640 aa16.34■□□□□ 0.21
COL5A1-205ENST00000464187 ZNF18P17022 549 aa16.34■□□□□ 0.21
COL5A1-205ENST00000464187 GTF2F1P35269 517 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL5A1-205ENST00000464187 GJA5P36382 358 aa16.34■□□□□ 0.21
COL5A1-205ENST00000464187 TPD52L1Q16890 204 aaPredicted RBP16.34■□□□□ 0.21
COL5A1-205ENST00000464187 CHADLQ6NUI6 762 aa16.34■□□□□ 0.21
COL5A1-205ENST00000464187 TEX2Q8IWB9 1127 aa16.34■□□□□ 0.21
COL5A1-205ENST00000464187 C2orf69Q8N8R5 385 aa16.34■□□□□ 0.21
COL5A1-205ENST00000464187 REPS2Q8NFH8 660 aa16.34■□□□□ 0.21
COL5A1-205ENST00000464187 INTS13Q9NVM9 706 aa16.34■□□□□ 0.21
COL5A1-205ENST00000464187 PNMA2Q9UL42 364 aa16.34■□□□□ 0.21
COL5A1-205ENST00000464187 NFE2L3Q9Y4A8 694 aa16.34■□□□□ 0.21
COL5A1-205ENST00000464187 MYPNQ86TC9 1320 aa16.34■□□□□ 0.21
COL5A1-205ENST00000464187 GCOM1H8Y6P7 765 aaPredicted RBP16.33■□□□□ 0.21
COL5A1-205ENST00000464187 POLR2MP0CAP2 368 aa16.33■□□□□ 0.21
COL5A1-205ENST00000464187 HOXA7P31268 230 aaPredicted RBP16.33■□□□□ 0.21
COL5A1-205ENST00000464187 PDXDC2PQ6P474 469 aa16.33■□□□□ 0.21
COL5A1-205ENST00000464187 VSTM4Q8IW00 320 aa16.33■□□□□ 0.21
COL5A1-205ENST00000464187 TMEM60Q9H2L4 133 aa16.33■□□□□ 0.21
COL5A1-205ENST00000464187 KCND1Q9NSA2 647 aa16.33■□□□□ 0.21
COL5A1-205ENST00000464187 HOMER2Q9NSB8 354 aa16.33■□□□□ 0.21
COL5A1-205ENST00000464187 SMCHD1A6NHR9 2005 aa16.33■□□□□ 0.2
COL5A1-205ENST00000464187 NFIBO00712 420 aa16.33■□□□□ 0.2
COL5A1-205ENST00000464187 TDP2O95551 362 aa16.33■□□□□ 0.2
COL5A1-205ENST00000464187 TNNT1P13805 278 aa16.33■□□□□ 0.2
COL5A1-205ENST00000464187 SFPQP23246 707 aaKnown RBP eCLIP16.33■□□□□ 0.2
COL5A1-205ENST00000464187 ERCC5P28715 1186 aaPredicted RBP16.33■□□□□ 0.2
COL5A1-205ENST00000464187 LONP1P36776 959 aaKnown RBP16.33■□□□□ 0.2
COL5A1-205ENST00000464187 ORC2Q13416 577 aaPredicted RBP16.33■□□□□ 0.2
COL5A1-205ENST00000464187 DHX8Q14562 1220 aaKnown RBP16.33■□□□□ 0.2
COL5A1-205ENST00000464187 CST9Q5W186 159 aa16.33■□□□□ 0.2
COL5A1-205ENST00000464187 FCHSD1Q86WN1 690 aa16.33■□□□□ 0.2
COL5A1-205ENST00000464187 CLEC4DQ8WXI8 215 aa16.33■□□□□ 0.2
COL5A1-205ENST00000464187 ZNF214Q9UL59 606 aaPredicted RBP16.33■□□□□ 0.2
COL5A1-205ENST00000464187 LAD1O00515 517 aa16.32■□□□□ 0.2
COL5A1-205ENST00000464187 RIOK3O14730 519 aaKnown RBP16.32■□□□□ 0.2
COL5A1-205ENST00000464187 CD44P16070 742 aaKnown RBP16.32■□□□□ 0.2
COL5A1-205ENST00000464187 OAZ1P54368 228 aa16.32■□□□□ 0.2
COL5A1-205ENST00000464187 TMEM132BQ14DG7 1078 aa16.32■□□□□ 0.2
COL5A1-205ENST00000464187 HSP90AA4PQ58FG1 418 aa16.32■□□□□ 0.2
COL5A1-205ENST00000464187 PPP4R3AQ6IN85 833 aa16.32■□□□□ 0.2
COL5A1-205ENST00000464187 FASTKD5Q7L8L6 764 aaKnown RBP16.32■□□□□ 0.2
COL5A1-205ENST00000464187 IQUBQ8NA54 791 aa16.32■□□□□ 0.2
COL5A1-205ENST00000464187 GSDMAQ96QA5 445 aa16.32■□□□□ 0.2
COL5A1-205ENST00000464187 PYM1Q9BRP8 204 aaKnown RBP16.32■□□□□ 0.2
COL5A1-205ENST00000464187 AGTPBP1Q9UPW5 1226 aa16.32■□□□□ 0.2
COL5A1-205ENST00000464187 PTPRFP10586 1907 aa16.32■□□□□ 0.2
COL5A1-205ENST00000464187 USP11P51784 963 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 SNAPC2Q13487 334 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 CUL4BQ13620 913 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 MOGSQ13724 837 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 MUM1L1Q5H9M0 696 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 CT47A1Q5JQC4 288 aaPredicted RBP16.31■□□□□ 0.2
COL5A1-205ENST00000464187 MCF2L2Q86YR7 1114 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 CCAR2Q8N163 923 aaKnown RBP16.31■□□□□ 0.2
COL5A1-205ENST00000464187 CRYGNQ8WXF5 182 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 STAMQ92783 540 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 TRERF1Q96PN7 1200 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 RIPK3Q9Y572 518 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 ATP2A1O14983 1001 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 SLC37A4O43826 429 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 SREBF1P36956 1147 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 HSD17B4P51659 736 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 IRX3P78415 501 aaPredicted RBP16.31■□□□□ 0.2
COL5A1-205ENST00000464187 ARHGAP4P98171 946 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 PTPN21Q16825 1174 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 SNRNP48Q6IEG0 339 aaKnown RBP16.31■□□□□ 0.2
COL5A1-205ENST00000464187 NYAP1Q6ZVC0 841 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 POTEDQ86YR6 584 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 MTRQ99707 1265 aa16.31■□□□□ 0.2
COL5A1-205ENST00000464187 SAMSN1Q9NSI8 373 aaKnown RBP16.31■□□□□ 0.2
COL5A1-205ENST00000464187 SYNRGQ9UMZ2 1314 aa16.3■□□□□ 0.2
COL5A1-205ENST00000464187 RLFQ13129 1914 aa16.3■□□□□ 0.2
COL5A1-205ENST00000464187 OR52Z1P0C646 297 aa16.3■□□□□ 0.2
COL5A1-205ENST00000464187 GCFC2P16383 781 aaKnown RBP16.3■□□□□ 0.2
COL5A1-205ENST00000464187 PRPHP41219 470 aa16.3■□□□□ 0.2
COL5A1-205ENST00000464187 LBX2Q6XYB7 198 aa16.3■□□□□ 0.2
COL5A1-205ENST00000464187 DTHD1Q6ZMT9 781 aa16.3■□□□□ 0.2
COL5A1-205ENST00000464187 SMYD4Q8IYR2 804 aaPredicted RBP16.3■□□□□ 0.2
COL5A1-205ENST00000464187 TEX13BQ9BXU2 312 aa16.3■□□□□ 0.2
COL5A1-205ENST00000464187 ASCC2Q9H1I8 757 aaPredicted RBP16.3■□□□□ 0.2
COL5A1-205ENST00000464187 BLZF1Q9H2G9 400 aa16.3■□□□□ 0.2
COL5A1-205ENST00000464187 GPBP1L1Q9HC44 474 aaPredicted RBP16.3■□□□□ 0.2
COL5A1-205ENST00000464187 DDX25Q9UHL0 483 aaKnown RBP16.3■□□□□ 0.2
COL5A1-205ENST00000464187 PARP14Q460N5 1801 aa16.3■□□□□ 0.2
COL5A1-205ENST00000464187 PPP1R3GB7ZBB8 358 aa16.29■□□□□ 0.2
COL5A1-205ENST00000464187 GTPBP6O43824 516 aaPredicted RBP16.29■□□□□ 0.2
COL5A1-205ENST00000464187 KCNJ6P48051 423 aa16.29■□□□□ 0.2
COL5A1-205ENST00000464187 RBM10P98175 930 aaKnown RBP16.29■□□□□ 0.2
COL5A1-205ENST00000464187 GHRHRQ02643 423 aa16.29■□□□□ 0.2
COL5A1-205ENST00000464187 PLS1Q14651 629 aa16.29■□□□□ 0.2
COL5A1-205ENST00000464187 E4F1Q66K89 784 aaPredicted RBP16.29■□□□□ 0.2
COL5A1-205ENST00000464187 POTEEQ6S8J3 1075 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms