RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 CHST3Q7LGC8 479 aa27.08■■□□□ 1.93
SSNA1-203ENST00000463511 NSUN6Q8TEA1 469 aaKnown RBP27.08■■□□□ 1.93
SSNA1-203ENST00000463511 GH1P01241 217 aa27.07■■□□□ 1.92
SSNA1-203ENST00000463511 QRICH1Q2TAL8 776 aa27.07■■□□□ 1.92
SSNA1-203ENST00000463511 CCDC178Q5BJE1 867 aa27.07■■□□□ 1.92
SSNA1-203ENST00000463511 ZSCAN10Q96SZ4 725 aaPredicted RBP27.07■■□□□ 1.92
SSNA1-203ENST00000463511 EPOPA6NHQ4 379 aa27.06■■□□□ 1.92
SSNA1-203ENST00000463511 DHX16O60231 1041 aaKnown RBP27.06■■□□□ 1.92
SSNA1-203ENST00000463511 ARHGEF15O94989 841 aa27.06■■□□□ 1.92
SSNA1-203ENST00000463511 TFF2Q03403 129 aa27.06■■□□□ 1.92
SSNA1-203ENST00000463511 SKIV2LQ15477 1246 aaKnown RBP27.06■■□□□ 1.92
SSNA1-203ENST00000463511 ASPRV1Q53RT3 343 aa27.06■■□□□ 1.92
SSNA1-203ENST00000463511 GDF6Q6KF10 455 aaPredicted RBP27.06■■□□□ 1.92
SSNA1-203ENST00000463511 HERC6Q8IVU3 1022 aa27.06■■□□□ 1.92
SSNA1-203ENST00000463511 ENAHQ8N8S7 591 aaPredicted RBP27.06■■□□□ 1.92
SSNA1-203ENST00000463511 PHOSPHO2Q8TCD6 241 aa27.06■■□□□ 1.92
SSNA1-203ENST00000463511 CTAGE1Q96RT6 745 aa27.06■■□□□ 1.92
SSNA1-203ENST00000463511 RMDN3Q96TC7 470 aa27.06■■□□□ 1.92
SSNA1-203ENST00000463511 DIAPH3Q9NSV4 1193 aa27.06■■□□□ 1.92
SSNA1-203ENST00000463511 STXBP2Q15833 593 aa27.05■■□□□ 1.92
SSNA1-203ENST00000463511 MCF2L2Q86YR7 1114 aa27.05■■□□□ 1.92
SSNA1-203ENST00000463511 CCDC155Q8N6L0 562 aa27.05■■□□□ 1.92
SSNA1-203ENST00000463511 ANKS1AQ92625 1134 aa27.05■■□□□ 1.92
SSNA1-203ENST00000463511 KAT2BQ92831 832 aa27.05■■□□□ 1.92
SSNA1-203ENST00000463511 MAF1Q9H063 256 aa27.05■■□□□ 1.92
SSNA1-203ENST00000463511 MTCH2Q9Y6C9 303 aa27.05■■□□□ 1.92
SSNA1-203ENST00000463511 GTPBP6O43824 516 aaPredicted RBP27.04■■□□□ 1.92
SSNA1-203ENST00000463511 PARP1P09874 1014 aaKnown RBP27.04■■□□□ 1.92
SSNA1-203ENST00000463511 EIF2AK2P19525 551 aaKnown RBP27.04■■□□□ 1.92
SSNA1-203ENST00000463511 NT5C2P49902 561 aa27.04■■□□□ 1.92
SSNA1-203ENST00000463511 TAP1Q03518 808 aa27.04■■□□□ 1.92
SSNA1-203ENST00000463511 FBXO11Q86XK2 927 aa27.04■■□□□ 1.92
SSNA1-203ENST00000463511 CAGE1Q8TC20 777 aa27.04■■□□□ 1.92
SSNA1-203ENST00000463511 AFAP1L1Q8TED9 768 aa27.04■■□□□ 1.92
SSNA1-203ENST00000463511 ARNTL2Q8WYA1 636 aa27.04■■□□□ 1.92
SSNA1-203ENST00000463511 NECAB3Q96P71 396 aaPredicted RBP27.04■■□□□ 1.92
SSNA1-203ENST00000463511 IWS1Q96ST2 819 aa27.04■■□□□ 1.92
SSNA1-203ENST00000463511 JMJD4Q9H9V9 463 aa27.04■■□□□ 1.92
SSNA1-203ENST00000463511 VAT1LQ9HCJ6 419 aa27.04■■□□□ 1.92
SSNA1-203ENST00000463511 ZSWIM5Q9P217 1185 aa27.04■■□□□ 1.92
SSNA1-203ENST00000463511 MRPL11Q9Y3B7 192 aaKnown RBP27.04■■□□□ 1.92
SSNA1-203ENST00000463511 BAIAP3O94812 1187 aa27.03■■□□□ 1.92
SSNA1-203ENST00000463511 ARHGEF16Q5VV41 709 aa27.03■■□□□ 1.92
SSNA1-203ENST00000463511 KRT40Q6A162 431 aa27.03■■□□□ 1.92
SSNA1-203ENST00000463511 SESTD1Q86VW0 696 aa27.03■■□□□ 1.92
SSNA1-203ENST00000463511 SIP14410 1827 aa27.02■■□□□ 1.92
SSNA1-203ENST00000463511 KIF28PB7ZC32 967 aa27.02■■□□□ 1.92
SSNA1-203ENST00000463511 POU3F3P20264 500 aaPredicted RBP27.02■■□□□ 1.92
SSNA1-203ENST00000463511 CASTP20810 708 aaKnown RBP27.02■■□□□ 1.92
SSNA1-203ENST00000463511 COL9A1P20849 921 aa27.02■■□□□ 1.92
SSNA1-203ENST00000463511 IMMTQ16891 758 aaKnown RBP27.02■■□□□ 1.92
SSNA1-203ENST00000463511 DHX38Q92620 1227 aaKnown RBP27.02■■□□□ 1.92
SSNA1-203ENST00000463511 DDX41Q9UJV9 622 aaKnown RBP27.02■■□□□ 1.92
SSNA1-203ENST00000463511 BAZ2BQ9UIF8 2168 aaKnown RBP27.02■■□□□ 1.92
SSNA1-203ENST00000463511 CFBP00751 764 aa27.01■■□□□ 1.91
SSNA1-203ENST00000463511 KCNJ6P48051 423 aa27.01■■□□□ 1.91
SSNA1-203ENST00000463511 KCNQ1P51787 676 aa27.01■■□□□ 1.91
SSNA1-203ENST00000463511 DGKDQ16760 1214 aa27.01■■□□□ 1.91
SSNA1-203ENST00000463511 LRRC8DQ7L1W4 858 aa27.01■■□□□ 1.91
SSNA1-203ENST00000463511 DSCC1Q9BVC3 393 aa27.01■■□□□ 1.91
SSNA1-203ENST00000463511 PXMP2Q9NR77 195 aa27.01■■□□□ 1.91
SSNA1-203ENST00000463511 MRVI1Q9Y6F6 885 aa27.01■■□□□ 1.91
SSNA1-203ENST00000463511 DOCK5Q9H7D0 1870 aa27■■□□□ 1.91
SSNA1-203ENST00000463511 TLL1O43897 1013 aa27■■□□□ 1.91
SSNA1-203ENST00000463511 SELPP16109 830 aa27■■□□□ 1.91
SSNA1-203ENST00000463511 WDR5P61964 334 aaKnown RBP27■■□□□ 1.91
SSNA1-203ENST00000463511 GPNMBQ14956 572 aa27■■□□□ 1.91
SSNA1-203ENST00000463511 SPRED2Q7Z698 418 aa27■■□□□ 1.91
SSNA1-203ENST00000463511 TMCO2Q7Z6W1 182 aaPredicted RBP27■■□□□ 1.91
SSNA1-203ENST00000463511 UBAC1Q9BSL1 405 aa27■■□□□ 1.91
SSNA1-203ENST00000463511 GTF2IRD1Q9UHL9 959 aa27■■□□□ 1.91
SSNA1-203ENST00000463511 MICAL3Q7RTP6 2002 aa27■■□□□ 1.91
SSNA1-203ENST00000463511 HIP1O00291 1037 aa26.99■■□□□ 1.91
SSNA1-203ENST00000463511 NR3C2P08235 984 aa26.99■■□□□ 1.91
SSNA1-203ENST00000463511 ZNF286BP0CG31 522 aa26.99■■□□□ 1.91
SSNA1-203ENST00000463511 BMP1P13497 986 aa26.99■■□□□ 1.91
SSNA1-203ENST00000463511 PSEN2P49810 448 aa26.99■■□□□ 1.91
SSNA1-203ENST00000463511 AAK1Q2M2I8 961 aa26.99■■□□□ 1.91
SSNA1-203ENST00000463511 STAG2Q8N3U4 1231 aa26.99■■□□□ 1.91
SSNA1-203ENST00000463511 C7orf31Q8N865 590 aa26.99■■□□□ 1.91
SSNA1-203ENST00000463511 ALG1Q9BT22 464 aa26.99■■□□□ 1.91
SSNA1-203ENST00000463511 KRT23Q9C075 422 aa26.99■■□□□ 1.91
SSNA1-203ENST00000463511 HDAC6Q9UBN7 1215 aa26.99■■□□□ 1.91
SSNA1-203ENST00000463511 GTF3C3Q9Y5Q9 886 aa26.99■■□□□ 1.91
SSNA1-203ENST00000463511 OPLAHO14841 1288 aa26.98■■□□□ 1.91
SSNA1-203ENST00000463511 EIF3JO75822 258 aaKnown RBP26.98■■□□□ 1.91
SSNA1-203ENST00000463511 CKBP12277 381 aa26.98■■□□□ 1.91
SSNA1-203ENST00000463511 EMID1Q96A84 441 aaPredicted RBP26.98■■□□□ 1.91
SSNA1-203ENST00000463511 AMNQ9BXJ7 453 aa26.98■■□□□ 1.91
SSNA1-203ENST00000463511 LCHNA4D1U4 455 aa26.97■■□□□ 1.91
SSNA1-203ENST00000463511 RBAK-RBAKDNI3L0D1 243 aa26.97■■□□□ 1.91
SSNA1-203ENST00000463511 HSD17B4P51659 736 aa26.97■■□□□ 1.91
SSNA1-203ENST00000463511 DEFB103AP81534 67 aa26.97■■□□□ 1.91
SSNA1-203ENST00000463511 RBL2Q08999 1139 aa26.97■■□□□ 1.91
SSNA1-203ENST00000463511 MFSD10Q14728 455 aa26.97■■□□□ 1.91
SSNA1-203ENST00000463511 BMP2KLQ5H9B9 411 aa26.97■■□□□ 1.91
SSNA1-203ENST00000463511 IFIT1BQ5T764 474 aaKnown RBP26.97■■□□□ 1.91
SSNA1-203ENST00000463511 CNKSR3Q6P9H4 555 aa26.97■■□□□ 1.91
SSNA1-203ENST00000463511 PPTC7Q8NI37 304 aa26.97■■□□□ 1.91
SSNA1-203ENST00000463511 KATNAL1Q9BW62 490 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms