RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 TTLL4Q14679 1199 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 STXBP2Q15833 593 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 CCDC62Q6P9F0 684 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 SMARCC2Q8TAQ2 1214 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 BADQ92934 168 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 PHKBQ93100 1093 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 GLT1D1Q96MS3 346 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 GDF15Q99988 308 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 TSEN34Q9BSV6 310 aaKnown RBP9.94□□□□□ -0.82
TMEM254-208ENST00000463209 UBE2OQ9C0C9 1292 aaKnown RBP9.94□□□□□ -0.82
TMEM254-208ENST00000463209 TMEM260Q9NX78 707 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 RTEL1Q9NZ71 1219 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 TELO2Q9Y4R8 837 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 V9GY48 417 aaPredicted RBP9.94□□□□□ -0.82
TMEM254-208ENST00000463209 TRIOBPQ9H2D6 2365 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 ZNF286BP0CG31 522 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 FXR1P51114 621 aaKnown RBP eCLIP9.93□□□□□ -0.82
TMEM254-208ENST00000463209 MRPS9P82933 396 aaKnown RBP9.93□□□□□ -0.82
TMEM254-208ENST00000463209 SP2Q02086 613 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 ARHGAP1Q07960 439 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 FAAP100Q0VG06 881 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 ITGA7Q13683 1181 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 RUFY3Q7L099 469 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 AFG1LQ8WV93 481 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 IWS1Q96ST2 819 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 PPP1R12CQ9BZL4 782 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 TRPV6Q9H1D0 765 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 PSTPIP2Q9H939 334 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 ZSWIM6Q9HCJ5 1215 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 RBM28Q9NW13 759 aaKnown RBP9.93□□□□□ -0.82
TMEM254-208ENST00000463209 PKD2L1Q9P0L9 805 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 PRKAG2Q9UGJ0 569 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 MRVI1Q9Y6F6 885 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 MYH7BA7E2Y1 1941 aa9.93□□□□□ -0.82
TMEM254-208ENST00000463209 RANBP2P49792 3224 aaKnown RBP9.93□□□□□ -0.82
TMEM254-208ENST00000463209 FRMPD4Q14CM0 1322 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 UMODL1Q5DID0 1318 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 LOC102724159A0A0B4J2E5 919 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 B4DLN1 442 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 STXBP3O00186 592 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 ARVCFO00192 962 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 EIF3JO75822 258 aaKnown RBP9.92□□□□□ -0.82
TMEM254-208ENST00000463209 GH1P01241 217 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 MMP3P08254 477 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 UBA1P22314 1058 aaKnown RBP9.92□□□□□ -0.82
TMEM254-208ENST00000463209 PSMA5P28066 241 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 SMARCA1P28370 1054 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 CCND2P30279 289 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 CPT1AP50416 773 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 MRPL12P52815 198 aaKnown RBP9.92□□□□□ -0.82
TMEM254-208ENST00000463209 EPHB4P54760 987 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 NAPAP54920 295 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 NKX3-2P78367 333 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 PURAQ00577 322 aaKnown RBP9.92□□□□□ -0.82
TMEM254-208ENST00000463209 SP4Q02446 784 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 PWP2Q15269 919 aaKnown RBP9.92□□□□□ -0.82
TMEM254-208ENST00000463209 C9orf50Q5SZB4 431 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 VSIG10LQ86VR7 867 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 FAM126BQ8IXS8 530 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 CUL5Q93034 780 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 LRCH3Q96II8 777 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 PDRG1Q9NUG6 133 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 TRMT13Q9NUP7 481 aaKnown RBP9.92□□□□□ -0.82
TMEM254-208ENST00000463209 TMEM39AQ9NV64 488 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 DDX41Q9UJV9 622 aaKnown RBP9.92□□□□□ -0.82
TMEM254-208ENST00000463209 Q9Y3F1 56 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 CYP46A1Q9Y6A2 500 aa9.92□□□□□ -0.82
TMEM254-208ENST00000463209 ELP1O95163 1332 aa9.91□□□□□ -0.82
TMEM254-208ENST00000463209 DCDC2CA8MYV0 355 aa9.91□□□□□ -0.82
TMEM254-208ENST00000463209 ZEB2O60315 1214 aa9.91□□□□□ -0.82
TMEM254-208ENST00000463209 B4GALT4O60513 344 aa9.91□□□□□ -0.82
TMEM254-208ENST00000463209 GGPS1O95749 300 aa9.91□□□□□ -0.82
TMEM254-208ENST00000463209 RAG1P15918 1043 aa9.91□□□□□ -0.82
TMEM254-208ENST00000463209 PDIA3P30101 505 aaKnown RBP9.91□□□□□ -0.82
TMEM254-208ENST00000463209 CDK7P50613 346 aa9.91□□□□□ -0.82
TMEM254-208ENST00000463209 ADCY7P51828 1080 aa9.91□□□□□ -0.82
TMEM254-208ENST00000463209 C1QBPQ07021 282 aaKnown RBP9.91□□□□□ -0.82
TMEM254-208ENST00000463209 TRAF1Q13077 416 aa9.91□□□□□ -0.82
TMEM254-208ENST00000463209 SEMA3FQ13275 785 aa9.91□□□□□ -0.82
TMEM254-208ENST00000463209 FAM47CQ5HY64 1035 aa9.91□□□□□ -0.82
TMEM254-208ENST00000463209 C1orf53Q5VUE5 145 aa9.91□□□□□ -0.82
TMEM254-208ENST00000463209 ANKRD33Q7Z3H0 272 aa9.91□□□□□ -0.82
TMEM254-208ENST00000463209 UIMC1Q96RL1 719 aa9.91□□□□□ -0.82
TMEM254-208ENST00000463209 LBHD1Q9BQE6 289 aaPredicted RBP9.91□□□□□ -0.82
TMEM254-208ENST00000463209 SLC26A6Q9BXS9 759 aa9.91□□□□□ -0.82
TMEM254-208ENST00000463209 NID2Q14112 1375 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 A6NJR5 290 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 PIK3CDO00329 1044 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 KIAA0355O15063 1070 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 NKRFO15226 690 aaKnown RBP eCLIP9.9□□□□□ -0.82
TMEM254-208ENST00000463209 CYP2C9P11712 490 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 CYP2C18P33260 490 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 SHHQ15465 462 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 PKN1Q16512 942 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 NBPF20Q3BBV1 942 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 HSDL1Q3SXM5 330 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 JAKMIP3Q5VZ66 844 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 DHX37Q8IY37 1157 aaKnown RBP9.9□□□□□ -0.82
TMEM254-208ENST00000463209 SPATA33Q96N06 139 aa9.9□□□□□ -0.82
TMEM254-208ENST00000463209 MTG1Q9BT17 334 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms