RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 DHX38Q92620 1227 aaKnown RBP9.2□□□□□ -0.94
SMC3-202ENST00000462899 GMCL1Q96IK5 515 aa9.2□□□□□ -0.94
SMC3-202ENST00000462899 TRERF1Q96PN7 1200 aa9.2□□□□□ -0.94
SMC3-202ENST00000462899 MTG1Q9BT17 334 aaPredicted RBP9.2□□□□□ -0.94
SMC3-202ENST00000462899 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMC3-202ENST00000462899 BOLA2Q9H3K6 86 aa9.2□□□□□ -0.94
SMC3-202ENST00000462899 A6NJR5 290 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 TMEM232C9JQI7 657 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 DCXO43602 365 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 KCNA5P22460 613 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 EDNRBP24530 442 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 CPT1AP50416 773 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 ALDH5A1P51649 535 aaPredicted RBP9.19□□□□□ -0.94
SMC3-202ENST00000462899 HSP90AB4PQ58FF6 505 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 SLFN13Q68D06 897 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 PTCRAQ6ISU1 281 aaPredicted RBP9.19□□□□□ -0.94
SMC3-202ENST00000462899 TRAF7Q6Q0C0 670 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 KIAA1211Q6ZU35 1233 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 RASGRP2Q7LDG7 609 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 FAM160B2Q86V87 743 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 SESTD1Q86VW0 696 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 ITPRIPQ8IWB1 547 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 SIRT2Q8IXJ6 389 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 CLASRPQ8N2M8 674 aaKnown RBP9.19□□□□□ -0.94
SMC3-202ENST00000462899 PPP1R13LQ8WUF5 828 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 STAG1Q8WVM7 1258 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 ANKS1AQ92625 1134 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 KIF1BPQ96EK5 621 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 ZFHX2Q9C0A1 2572 aaPredicted RBP9.19□□□□□ -0.94
SMC3-202ENST00000462899 KIAA1671Q9BY89 1806 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 MYH6P13533 1939 aa9.19□□□□□ -0.94
SMC3-202ENST00000462899 RBAK-RBAKDNI3L0D1 243 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 NBNO60934 754 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 ALAS1P13196 640 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 NOVP48745 357 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 LSM11P83369 360 aaKnown RBP eCLIP9.18□□□□□ -0.941e-6■■■■□ 24.7
SMC3-202ENST00000462899 ZP2Q05996 745 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 BFSP2Q13515 415 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 C6orf132Q5T0Z8 1188 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 CNKSR3Q6P9H4 555 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 HFE2Q6ZVN8 426 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 NEDD1Q8NHV4 660 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 CAGE1Q8TC20 777 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 AFAP1L1Q8TED9 768 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 OSBP2Q969R2 916 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 DDRGK1Q96HY6 314 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 TGS1Q96RS0 853 aaKnown RBP9.18□□□□□ -0.94
SMC3-202ENST00000462899 PHOX2BQ99453 314 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 RAD9AQ99638 391 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 WDR11Q9BZH6 1224 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 MKNK2Q9HBH9 465 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 DMXL1Q9Y485 3027 aa9.18□□□□□ -0.94
SMC3-202ENST00000462899 CTDP1Q9Y5B0 961 aaPredicted RBP9.18□□□□□ -0.94
SMC3-202ENST00000462899 NKRFO15226 690 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMC3-202ENST00000462899 PRDM1O75626 825 aa9.17□□□□□ -0.94
SMC3-202ENST00000462899 ICAM1P05362 532 aa9.17□□□□□ -0.94
SMC3-202ENST00000462899 MYL3P08590 195 aa9.17□□□□□ -0.94
SMC3-202ENST00000462899 IFIT2P09913 472 aaKnown RBP9.17□□□□□ -0.94
SMC3-202ENST00000462899 KCNJ6P48051 423 aa9.17□□□□□ -0.94
SMC3-202ENST00000462899 HTRA4P83105 476 aaPredicted RBP9.17□□□□□ -0.94
SMC3-202ENST00000462899 PUS10Q3MIT2 529 aaKnown RBP9.17□□□□□ -0.94
SMC3-202ENST00000462899 OR6J1Q8NGC5 347 aa9.17□□□□□ -0.94
SMC3-202ENST00000462899 CHURC1Q8WUH1 139 aa9.17□□□□□ -0.94
SMC3-202ENST00000462899 KAT2BQ92831 832 aa9.17□□□□□ -0.94
SMC3-202ENST00000462899 FTOQ9C0B1 505 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMC3-202ENST00000462899 RANBP17Q9H2T7 1088 aaKnown RBP9.17□□□□□ -0.94
SMC3-202ENST00000462899 ALG13Q9NP73 1137 aaKnown RBP9.17□□□□□ -0.94
SMC3-202ENST00000462899 PRKAG3Q9UGI9 489 aa9.17□□□□□ -0.94
SMC3-202ENST00000462899 PRR12Q9ULL5 1215 aa9.17□□□□□ -0.94
SMC3-202ENST00000462899 ZNF292O60281 2723 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 ABHD14A-ACY1A0A1B0GW23 586 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 NFIBO00712 420 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 KPNA6O60684 536 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 ARIH2O95376 493 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 SELPP16109 830 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 SSTR3P32745 418 aaPredicted RBP9.16□□□□□ -0.94
SMC3-202ENST00000462899 SLC1A4P43007 532 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 SNAP25P60880 206 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 BAATQ14032 418 aaPredicted RBP9.16□□□□□ -0.94
SMC3-202ENST00000462899 MBTPS1Q14703 1052 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 TRIM71Q2Q1W2 868 aaKnown RBP9.16□□□□□ -0.94
SMC3-202ENST00000462899 FAM47CQ5HY64 1035 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 GDF6Q6KF10 455 aaPredicted RBP9.16□□□□□ -0.94
SMC3-202ENST00000462899 LRRC8DQ7L1W4 858 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 FTSJ3Q8IY81 847 aaKnown RBP9.16□□□□□ -0.94
SMC3-202ENST00000462899 STK11IPQ8N1F8 1099 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 RETREG2Q8NC44 543 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 PRSS33Q8NF86 280 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 COPS5Q92905 334 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 MRPL38Q96DV4 380 aaKnown RBP9.16□□□□□ -0.94
SMC3-202ENST00000462899 C17orf80Q9BSJ5 609 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 MTUS1Q9ULD2 1270 aa9.16□□□□□ -0.94
SMC3-202ENST00000462899 RIF1Q5UIP0 2472 aaKnown RBP9.16□□□□□ -0.94
SMC3-202ENST00000462899 FAM186AA6NE01 2351 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 MINDY4BA8MYZ0 360 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 H3BQ06 376 aaPredicted RBP9.15□□□□□ -0.94
SMC3-202ENST00000462899 GPAA1O43292 621 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 RAB11FIP3O75154 756 aa9.15□□□□□ -0.94
SMC3-202ENST00000462899 PARNO95453 639 aaKnown RBP9.15□□□□□ -0.94
SMC3-202ENST00000462899 CKBP12277 381 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms