RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 FAM182BQ5T319 152 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 PPP4R3AQ6IN85 833 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 TATDN1Q6P1N9 297 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 CNNM4Q6P4Q7 775 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 SHC4Q6S5L8 630 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 DTHD1Q6ZMT9 781 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 MTERF4Q7Z6M4 381 aaKnown RBP4.67□□□□□ -1.66
ERCC4-203ENST00000462862 FAM83AQ86UY5 434 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 FCHSD1Q86WN1 690 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 MAPKAPK5Q8IW41 473 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 CCDC144CPQ8IYA2 1237 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 CKAP2LQ8IYA6 745 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 STK11IPQ8N1F8 1099 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 REXO1Q8N1G1 1221 aaKnown RBP4.67□□□□□ -1.66
ERCC4-203ENST00000462862 VWA5B2Q8N398 1253 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 SRBD1Q8N5C6 995 aaKnown RBP4.67□□□□□ -1.66
ERCC4-203ENST00000462862 ZNF784Q8NCA9 323 aaPredicted RBP4.67□□□□□ -1.66
ERCC4-203ENST00000462862 NOC3LQ8WTT2 800 aaKnown RBP4.67□□□□□ -1.66
ERCC4-203ENST00000462862 C7orf43Q8WVR3 580 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 ZNF622Q969S3 477 aaKnown RBP eCLIP4.67□□□□□ -1.66
ERCC4-203ENST00000462862 MTMR8Q96EF0 704 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 GMCL1Q96IK5 515 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 ZKSCAN3Q9BRR0 538 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 NT5C3AQ9H0P0 336 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 DNAJC25Q9H1X3 360 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 CABP5Q9NP86 173 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 IL17RBQ9NRM6 502 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 SPTLC3Q9NUV7 552 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 USP40Q9NVE5 1235 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 VPS54Q9P1Q0 977 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 CLIP2Q9UDT6 1046 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 TACC3Q9Y6A5 838 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 KDM3AQ9Y4C1 1321 aa4.67□□□□□ -1.66
ERCC4-203ENST00000462862 CDC14CA4D256 554 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 STXBP3O00186 592 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 ZBTB5O15062 677 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 LILRA1O75019 489 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 PLEKHA8P1O95397 391 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 FGFR1OPO95684 399 aaKnown RBP4.66□□□□□ -1.66
ERCC4-203ENST00000462862 VIL1P09327 827 aaKnown RBP4.66□□□□□ -1.66
ERCC4-203ENST00000462862 TPM1P09493 284 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 PDHBP11177 359 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 MUTP22033 750 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 POLD1P28340 1107 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 GUCY1A2P33402 732 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 PTGIRP43119 386 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 TNNI2P48788 182 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 TOB1P50616 345 aaPredicted RBP4.66□□□□□ -1.66
ERCC4-203ENST00000462862 USP11P51784 963 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 ADCY7P51828 1080 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 NAPAP54920 295 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 CEBPZQ03701 1054 aaKnown RBP4.66□□□□□ -1.66
ERCC4-203ENST00000462862 ZNF543Q08ER8 600 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 KCNMA1Q12791 1236 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 MORC3Q14149 939 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 TNIP1Q15025 636 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 NPY5RQ15761 445 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 FILIP1LQ4L180 1135 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 FAM47AQ5JRC9 791 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 OTUD7BQ6GQQ9 843 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 APOBEC3HQ6NTF7 200 aaKnown RBP4.66□□□□□ -1.66
ERCC4-203ENST00000462862 CDC42EP5Q6NZY7 148 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 BTNL9Q6UXG8 535 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 ARHGAP27Q6ZUM4 889 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 SV2AQ7L0J3 742 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 NEK8Q86SG6 692 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 LUZP1Q86V48 1076 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 FAM160B2Q86V87 743 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 FAM114A1Q8IWE2 563 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 SLFN12Q8IYM2 578 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 RNF217Q8TC41 542 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 CUL5Q93034 780 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 CEP95Q96GE4 821 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 NAA15Q9BXJ9 866 aaKnown RBP4.66□□□□□ -1.66
ERCC4-203ENST00000462862 ARHGEF10LQ9HCE6 1279 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 RIC8AQ9NPQ8 531 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 MAP3K20Q9NYL2 800 aaKnown RBP4.66□□□□□ -1.66
ERCC4-203ENST00000462862 KCNJ14Q9UNX9 436 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 PCDHB6Q9Y5E3 794 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 ABCB11O95342 1321 aa4.66□□□□□ -1.66
ERCC4-203ENST00000462862 COL11A2P13942 1736 aaPredicted RBP4.66□□□□□ -1.66
ERCC4-203ENST00000462862 BAZ2AQ9UIF9 1905 aaKnown RBP4.66□□□□□ -1.66
ERCC4-203ENST00000462862 CYP2D7A0A087X1C5 515 aa4.65□□□□□ -1.67
ERCC4-203ENST00000462862 PVALEFA0A1B0GWK0 134 aa4.65□□□□□ -1.67
ERCC4-203ENST00000462862 BICDL2A1A5D9 508 aa4.65□□□□□ -1.67
ERCC4-203ENST00000462862 SMCO2A6NFE2 343 aa4.65□□□□□ -1.67
ERCC4-203ENST00000462862 POLR2DO15514 142 aaKnown RBP4.65□□□□□ -1.67
ERCC4-203ENST00000462862 PPIP5K2O43314 1243 aa4.65□□□□□ -1.67
ERCC4-203ENST00000462862 ADH1AP07327 375 aa4.65□□□□□ -1.67
ERCC4-203ENST00000462862 OR52Z1P0C646 297 aa4.65□□□□□ -1.67
ERCC4-203ENST00000462862 CYP2D6P10635 497 aa4.65□□□□□ -1.67
ERCC4-203ENST00000462862 SFPQP23246 707 aaKnown RBP eCLIP4.65□□□□□ -1.67
ERCC4-203ENST00000462862 MARCKSP29966 332 aaPredicted RBP4.65□□□□□ -1.67
ERCC4-203ENST00000462862 UBA7P41226 1012 aa4.65□□□□□ -1.67
ERCC4-203ENST00000462862 SLC1A4P43007 532 aa4.65□□□□□ -1.67
ERCC4-203ENST00000462862 TUBB4BP68371 445 aa4.65□□□□□ -1.67
ERCC4-203ENST00000462862 ICA1Q05084 483 aa4.65□□□□□ -1.67
ERCC4-203ENST00000462862 PSMD2Q13200 908 aa4.65□□□□□ -1.67
ERCC4-203ENST00000462862 CERKLQ49MI3 558 aaPredicted RBP4.65□□□□□ -1.67
ERCC4-203ENST00000462862 RNFT1Q5M7Z0 435 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms