RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 BTBD18B2RXH4 712 aa13.47□□□□□ -0.25
CPNE1-221ENST00000462352 SEPT4O43236 478 aa13.47□□□□□ -0.25
CPNE1-221ENST00000462352 SREBF1P36956 1147 aa13.47□□□□□ -0.25
CPNE1-221ENST00000462352 MRPS9P82933 396 aaKnown RBP13.47□□□□□ -0.25
CPNE1-221ENST00000462352 NR5A1Q13285 461 aa13.47□□□□□ -0.25
CPNE1-221ENST00000462352 CCDC144BQ3MJ40 725 aa13.47□□□□□ -0.25
CPNE1-221ENST00000462352 TAPT1Q6NXT6 567 aa13.47□□□□□ -0.25
CPNE1-221ENST00000462352 XRRA1Q6P2D8 792 aa13.47□□□□□ -0.25
CPNE1-221ENST00000462352 KRT25Q7Z3Z0 450 aa13.47□□□□□ -0.25
CPNE1-221ENST00000462352 PAK6Q9NQU5 681 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-221ENST00000462352 PDGFCQ9NRA1 345 aa13.47□□□□□ -0.25
CPNE1-221ENST00000462352 RTEL1Q9NZ71 1219 aa13.47□□□□□ -0.25
CPNE1-221ENST00000462352 CENPFP49454 3210 aa13.47□□□□□ -0.25
CPNE1-221ENST00000462352 RBM47A0AV96 593 aaKnown RBP13.46□□□□□ -0.25
CPNE1-221ENST00000462352 STAM2O75886 525 aa13.46□□□□□ -0.25
CPNE1-221ENST00000462352 RGS20O76081 388 aa13.46□□□□□ -0.25
CPNE1-221ENST00000462352 HSP90AA1P07900 732 aaKnown RBP13.46□□□□□ -0.25
CPNE1-221ENST00000462352 AKR1A1P14550 325 aa13.46□□□□□ -0.25
CPNE1-221ENST00000462352 ADCYAP1R1P41586 468 aa13.46□□□□□ -0.25
CPNE1-221ENST00000462352 ARHGAP4P98171 946 aa13.46□□□□□ -0.25
CPNE1-221ENST00000462352 BECN1Q14457 450 aa13.46□□□□□ -0.25
CPNE1-221ENST00000462352 SAFBQ15424 915 aaKnown RBP eCLIP13.46□□□□□ -0.25
CPNE1-221ENST00000462352 LARP1BQ659C4 914 aaKnown RBP13.46□□□□□ -0.25
CPNE1-221ENST00000462352 SEPT14Q6ZU15 432 aa13.46□□□□□ -0.25
CPNE1-221ENST00000462352 TBCKQ8TEA7 893 aa13.46□□□□□ -0.25
CPNE1-221ENST00000462352 CRYGNQ8WXF5 182 aa13.46□□□□□ -0.25
CPNE1-221ENST00000462352 TNFRSF25Q93038 417 aa13.46□□□□□ -0.25
CPNE1-221ENST00000462352 DDX20Q9UHI6 824 aaKnown RBP13.46□□□□□ -0.25
CPNE1-221ENST00000462352 FAM184BQ9ULE4 1060 aa13.46□□□□□ -0.25
CPNE1-221ENST00000462352 CCDC194A0A1B0GVG4 234 aa13.45□□□□□ -0.26
CPNE1-221ENST00000462352 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-221ENST00000462352 ADCY6O43306 1168 aa13.45□□□□□ -0.26
CPNE1-221ENST00000462352 CYP3A4P08684 503 aa13.45□□□□□ -0.26
CPNE1-221ENST00000462352 NONOQ15233 471 aaKnown RBP eCLIP13.45□□□□□ -0.26
CPNE1-221ENST00000462352 EARS2Q5JPH6 523 aaKnown RBP13.45□□□□□ -0.26
CPNE1-221ENST00000462352 ANO1Q5XXA6 986 aa13.45□□□□□ -0.26
CPNE1-221ENST00000462352 LHX8Q68G74 356 aa13.45□□□□□ -0.26
CPNE1-221ENST00000462352 PIK3AP1Q6ZUJ8 805 aa13.45□□□□□ -0.26
CPNE1-221ENST00000462352 INPP4AQ96PE3 977 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-221ENST00000462352 DEFB118Q96PH6 123 aa13.45□□□□□ -0.26
CPNE1-221ENST00000462352 WDR11Q9BZH6 1224 aa13.45□□□□□ -0.26
CPNE1-221ENST00000462352 UBIAD1Q9Y5Z9 338 aa13.45□□□□□ -0.26
CPNE1-221ENST00000462352 FAM205CA6NFA0 338 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 H3BQV1 296 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 MSCO60682 206 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 ARIH2O95376 493 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 GJB1P08034 283 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 TXNP10599 105 aaKnown RBP13.44□□□□□ -0.26
CPNE1-221ENST00000462352 SMPD1P17405 629 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 ITGB5P18084 799 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 PDCP20941 246 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 TNFAIP2Q03169 654 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 TTLL4Q14679 1199 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 INF2Q27J81 1249 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 GNPTABQ3T906 1256 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 TMEM63BQ5T3F8 832 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 IFFO2Q5TF58 517 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 IQSEC1Q6DN90 963 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 NLRX1Q86UT6 975 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 SPRYD3Q8NCJ5 442 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 SCFD2Q8WU76 684 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 LENG1Q96BZ8 264 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-221ENST00000462352 TMEM106CQ9BVX2 250 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 FOXP1Q9H334 677 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-221ENST00000462352 MRVI1Q9Y6F6 885 aa13.44□□□□□ -0.26
CPNE1-221ENST00000462352 KIF28PB7ZC32 967 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 FIBPO43427 364 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 EDIL3O43854 480 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 SGPL1O95470 568 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 RARBP10826 455 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 ICAM3P32942 547 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 CIITAP33076 1130 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 ZNF76P36508 570 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 USP11P51784 963 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 SEMA3FQ13275 785 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 GNL2Q13823 731 aaKnown RBP13.43□□□□□ -0.26
CPNE1-221ENST00000462352 DUSP28Q4G0W2 176 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 CEP55Q53EZ4 464 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 GJC2Q5T442 439 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-221ENST00000462352 CCDC62Q6P9F0 684 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 KCNV1Q6PIU1 500 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 CYP2W1Q8TAV3 490 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 U2AF1L4Q8WU68 220 aaKnown RBP13.43□□□□□ -0.26
CPNE1-221ENST00000462352 GPRASP2Q96D09 838 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 MXRA8Q9BRK3 442 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 JADE2Q9NQC1 790 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 GNEQ9Y223 722 aaKnown RBP13.43□□□□□ -0.26
CPNE1-221ENST00000462352 KIAA1217Q5T5P2 1943 aa13.43□□□□□ -0.26
CPNE1-221ENST00000462352 IGLV3-22A0A075B6J6 115 aa13.42□□□□□ -0.26
CPNE1-221ENST00000462352 SPATA31C2B4DYI2 1134 aa13.42□□□□□ -0.26
CPNE1-221ENST00000462352 FAM86B1E9PN63 330 aa13.42□□□□□ -0.26
CPNE1-221ENST00000462352 MEIS1O00470 390 aa13.42□□□□□ -0.26
CPNE1-221ENST00000462352 DUSP11O75319 330 aaKnown RBP13.42□□□□□ -0.26
CPNE1-221ENST00000462352 FAM86B2P0C5J1 330 aa13.42□□□□□ -0.26
CPNE1-221ENST00000462352 SYT1P21579 422 aa13.42□□□□□ -0.26
CPNE1-221ENST00000462352 PTGS1P23219 599 aa13.42□□□□□ -0.26
CPNE1-221ENST00000462352 U2AF2P26368 475 aaKnown RBP eCLIP13.42□□□□□ -0.268e-57■■■■□ 22.3
CPNE1-221ENST00000462352 GJA8P48165 433 aa13.42□□□□□ -0.26
CPNE1-221ENST00000462352 MTMR1Q13613 665 aa13.42□□□□□ -0.26
CPNE1-221ENST00000462352 LY6KQ17RY6 165 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms