RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 P2RX5Q93086 422 aa8.46□□□□□ -1.06
TRAPPC10-205ENST00000461889 HNRNPABQ99729 332 aaKnown RBP8.46□□□□□ -1.06
TRAPPC10-205ENST00000461889 NOL10Q9BSC4 688 aaKnown RBP8.46□□□□□ -1.06
TRAPPC10-205ENST00000461889 BICC1Q9H694 974 aaKnown RBP8.46□□□□□ -1.06
TRAPPC10-205ENST00000461889 ERVK-5Q9HDB9 667 aa8.46□□□□□ -1.06
TRAPPC10-205ENST00000461889 GPHNQ9NQX3 736 aaPredicted RBP8.46□□□□□ -1.06
TRAPPC10-205ENST00000461889 CACNA2D2Q9NY47 1150 aa8.46□□□□□ -1.06
TRAPPC10-205ENST00000461889 PPP1R9AQ9ULJ8 1098 aa8.46□□□□□ -1.06
TRAPPC10-205ENST00000461889 PLAGL2Q9UPG8 496 aa8.46□□□□□ -1.06
TRAPPC10-205ENST00000461889 RIPK3Q9Y572 518 aa8.46□□□□□ -1.06
TRAPPC10-205ENST00000461889 CACNA1IQ9P0X4 2223 aa8.46□□□□□ -1.06
TRAPPC10-205ENST00000461889 WDFY3Q8IZQ1 3526 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 C2CD4DB7Z1M9 353 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 ATP2A1O14983 1001 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 NAALADL2Q58DX5 795 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 TRAF7Q6Q0C0 670 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 ATG9AQ7Z3C6 839 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 SESTD1Q86VW0 696 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 FAM133AQ8N9E0 248 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 ADAM32Q8TC27 787 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 RUNDC1Q96C34 613 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 IL17RAQ96F46 866 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 NEK1Q96PY6 1258 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 EPC1Q9H2F5 836 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 PARD6AQ9NPB6 346 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 TMX2Q9Y320 296 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 HECTD1Q9ULT8 2610 aa8.45□□□□□ -1.06
TRAPPC10-205ENST00000461889 ASB14A6NK59 587 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 F6X3S4 739 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 ASGR2P07307 311 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 MYL3P08590 195 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 NBPF7P0C2Y1 421 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 DNAJB1P25685 340 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 SHMT1P34896 483 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 MBTPS1Q14703 1052 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 DUSP28Q4G0W2 176 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 DBF4BQ8NFT6 615 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 VN1R2Q8NFZ6 395 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 CDCA3Q99618 268 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 VCPKMTQ9H867 229 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 GPR108Q9NPR9 543 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 PDGFCQ9NRA1 345 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 AATFQ9NY61 560 aaKnown RBP eCLIP8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 DLGAP2Q9P1A6 1054 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 FBXO40Q9UH90 709 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 SAP30BPQ9UHR5 308 aaKnown RBP8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 FBXO3Q9UK99 471 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 EMSYQ7Z589 1322 aa8.44□□□□□ -1.06
TRAPPC10-205ENST00000461889 SPTA1P02549 2419 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 USP17L12C9JPN9 530 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 USP17L21D6R901 530 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 TBC1D4O60343 1298 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 LRP3O75074 770 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 HOXB8P17481 243 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 SP100P23497 879 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 RFX5P48382 616 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 PLCD1P51178 756 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 KCNC3Q14003 757 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 PLEKHG4Q58EX7 1191 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 TMEM63BQ5T3F8 832 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 SNRNP48Q6IEG0 339 aaKnown RBP8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 SIAH1Q8IUQ4 282 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 CCDC146Q8IYE0 955 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 MAML2Q8IZL2 1156 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 SPICE1Q8N0Z3 855 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 SIX5Q8N196 739 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 ANKRD35Q8N283 1001 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 PLCD3Q8N3E9 789 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 SPPL3Q8TCT6 385 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 NECTIN4Q96NY8 510 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 SH2D4AQ9H788 454 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 TLE6Q9H808 572 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 TSHZ2Q9NRE2 1034 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 FBXO28Q9NVF7 368 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 CEP126Q9P2H0 1117 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 SMG5Q9UPR3 1016 aaKnown RBP8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 PCDHB13Q9Y5F0 798 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 PCDHGA2Q9Y5H1 932 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 PTPN13Q12923 2485 aa8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 TEP1Q99973 2627 aaKnown RBP8.43□□□□□ -1.06
TRAPPC10-205ENST00000461889 TM4SF5O14894 197 aa8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 LILRB5O75023 590 aa8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 SRGAP2BP0DMP2 458 aa8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 RBM25P49756 843 aaKnown RBP8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 TRIM71Q2Q1W2 868 aaKnown RBP8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 TWISTNBQ3B726 338 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 BRDTQ58F21 947 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 GDF6Q6KF10 455 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 ANKRD54Q6NXT1 300 aa8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 SYCE2Q6PIF2 218 aa8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 TTC6Q86TZ1 520 aa8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 RBM23Q86U06 439 aaKnown RBP8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 ZBTB44Q8NCP5 570 aa8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 CHST13Q8NET6 341 aa8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 IFIH1Q9BYX4 1025 aaKnown RBP8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 RC3H2Q9HBD1 1191 aaKnown RBP8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 RAI14Q9P0K7 980 aa8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 WNT16Q9UBV4 365 aa8.42□□□□□ -1.06
TRAPPC10-205ENST00000461889 LIMD1Q9UGP4 676 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms