RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SENP2Q9HC62 589 aa10.65□□□□□ -0.7
BRCA1-207ENST00000461798 PCDHA1Q9Y5I3 950 aa10.65□□□□□ -0.7
BRCA1-207ENST00000461798 RBM8AQ9Y5S9 174 aaKnown RBP10.65□□□□□ -0.7
BRCA1-207ENST00000461798 LRRC37A2A6NM11 1700 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 PNMA6FA0A0J9YX94 578 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 CYTH3O43739 400 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 B4GALT4O60513 344 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 ARIH2O95376 493 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 NR3C2P08235 984 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 SUPT20HL2P0C7V6 817 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 CSF2RAP15509 400 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 SMARCA1P28370 1054 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 CYP2C18P33260 490 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 PSMC6P62333 389 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 PTPN11Q06124 597 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-207ENST00000461798 ZNF697Q5TEC3 545 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 PSRC1Q6PGN9 363 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-207ENST00000461798 TMTC2Q8N394 836 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 COPS5Q92905 334 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 ESYT1Q9BSJ8 1104 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 IL23AQ9NPF7 189 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 GPHNQ9NQX3 736 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-207ENST00000461798 PXMP2Q9NR77 195 aa10.64□□□□□ -0.71
BRCA1-207ENST00000461798 DDX41Q9UJV9 622 aaKnown RBP10.64□□□□□ -0.71
BRCA1-207ENST00000461798 CFBP00751 764 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 GH1P01241 217 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 MYL3P08590 195 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 ARHGAP1Q07960 439 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 NECTIN1Q15223 517 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 NBPF20Q3BBV1 942 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 BMP2KLQ5H9B9 411 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 TMEM67Q5HYA8 995 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 ARHGEF16Q5VV41 709 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 NFRKBQ6P4R8 1299 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 ZNF365Q70YC5 407 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 CHST3Q7LGC8 479 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 CATIPQ7Z7H3 387 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 VSIG10LQ86VR7 867 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 PDCD7Q8N8D1 485 aaKnown RBP10.63□□□□□ -0.71
BRCA1-207ENST00000461798 HERVK_113Q902F9 699 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 EMID1Q96A84 441 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-207ENST00000461798 PIGSQ96S52 555 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 PPP1R12CQ9BZL4 782 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 TTYH1Q9H313 450 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-207ENST00000461798 HIPK3Q9H422 1215 aa10.63□□□□□ -0.71
BRCA1-207ENST00000461798 GCOM1H8Y6P7 765 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-207ENST00000461798 POLR2MP0CAP2 368 aa10.62□□□□□ -0.71
BRCA1-207ENST00000461798 LIFRP42702 1097 aa10.62□□□□□ -0.71
BRCA1-207ENST00000461798 KCNV1Q6PIU1 500 aa10.62□□□□□ -0.71
BRCA1-207ENST00000461798 SEPT14Q6ZU15 432 aa10.62□□□□□ -0.71
BRCA1-207ENST00000461798 CENPQQ7L2Z9 268 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-207ENST00000461798 SESTD1Q86VW0 696 aa10.62□□□□□ -0.71
BRCA1-207ENST00000461798 RPUSD2Q8IZ73 545 aaKnown RBP10.62□□□□□ -0.71
BRCA1-207ENST00000461798 SLC17A8Q8NDX2 589 aa10.62□□□□□ -0.71
BRCA1-207ENST00000461798 VWCEQ96DN2 955 aa10.62□□□□□ -0.71
BRCA1-207ENST00000461798 TMEM87BQ96K49 555 aa10.62□□□□□ -0.71
BRCA1-207ENST00000461798 CDX2Q99626 313 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-207ENST00000461798 LZTS2Q9BRK4 669 aa10.62□□□□□ -0.71
BRCA1-207ENST00000461798 PDCD2LQ9BRP1 358 aa10.62□□□□□ -0.71
BRCA1-207ENST00000461798 WNT8AQ9H1J5 351 aa10.62□□□□□ -0.71
BRCA1-207ENST00000461798 LY9Q9HBG7 655 aa10.62□□□□□ -0.71
BRCA1-207ENST00000461798 TRMT13Q9NUP7 481 aaKnown RBP10.62□□□□□ -0.71
BRCA1-207ENST00000461798 UMODL1Q5DID0 1318 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 SLC27A2O14975 620 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 RGS20O76081 388 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 DDAH1O94760 285 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 FGBP02675 491 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 MMP3P08254 477 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 ACRP10323 421 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 TGFB3P10600 412 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 HOXD8P13378 290 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-207ENST00000461798 EIF2AK2P19525 551 aaKnown RBP10.61□□□□□ -0.71
BRCA1-207ENST00000461798 CASTP20810 708 aaKnown RBP10.61□□□□□ -0.71
BRCA1-207ENST00000461798 KIF5BP33176 963 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 MCM5P33992 734 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 LAMC2Q13753 1193 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 LY6KQ17RY6 165 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 CREB3L3Q68CJ9 461 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 HOMER1Q86YM7 354 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 ZNF654Q8IZM8 581 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 PLCD3Q8N3E9 789 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 AFG1LQ8WV93 481 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 KAT2BQ92831 832 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 FAM212AQ96EL1 285 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 SPZ1Q9BXG8 430 aa10.61□□□□□ -0.71
BRCA1-207ENST00000461798 SH2B2O14492 632 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-207ENST00000461798 PRC1O43663 620 aa10.6□□□□□ -0.71
BRCA1-207ENST00000461798 PPFIA4O75335 1185 aa10.6□□□□□ -0.71
BRCA1-207ENST00000461798 PFKMP08237 780 aa10.6□□□□□ -0.71
BRCA1-207ENST00000461798 CYP2C9P11712 490 aa10.6□□□□□ -0.71
BRCA1-207ENST00000461798 HOXA13P31271 388 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-207ENST00000461798 GNAQP50148 359 aa10.6□□□□□ -0.71
BRCA1-207ENST00000461798 CCL23P55773 120 aa10.6□□□□□ -0.71
BRCA1-207ENST00000461798 PGM5Q15124 567 aa10.6□□□□□ -0.71
BRCA1-207ENST00000461798 TSGA10IPQ3SY00 556 aa10.6□□□□□ -0.71
BRCA1-207ENST00000461798 MYSM1Q5VVJ2 828 aa10.6□□□□□ -0.71
BRCA1-207ENST00000461798 CASC1Q6TDU7 716 aa10.6□□□□□ -0.71
BRCA1-207ENST00000461798 CTCFLQ8NI51 663 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-207ENST00000461798 FAM161BQ96MY7 647 aa10.6□□□□□ -0.71
BRCA1-207ENST00000461798 MTIF3Q9H2K0 278 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms