RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 RASGRP4Q8TDF6 673 aa17.29■□□□□ 0.36
TMEM39A-203ENST00000461654 NR2E3Q9Y5X4 410 aa17.29■□□□□ 0.36
TMEM39A-203ENST00000461654 CLIC4Q9Y696 253 aa17.29■□□□□ 0.36
TMEM39A-203ENST00000461654 M0R2N6 131 aa17.28■□□□□ 0.36
TMEM39A-203ENST00000461654 MSCO60682 206 aa17.28■□□□□ 0.36
TMEM39A-203ENST00000461654 FOSP01100 380 aaPredicted RBP17.28■□□□□ 0.36
TMEM39A-203ENST00000461654 ME1P48163 572 aa17.28■□□□□ 0.36
TMEM39A-203ENST00000461654 UBE2HP62256 183 aa17.28■□□□□ 0.36
TMEM39A-203ENST00000461654 TTC38Q5R3I4 469 aa17.28■□□□□ 0.36
TMEM39A-203ENST00000461654 JAKMIP3Q5VZ66 844 aa17.28■□□□□ 0.36
TMEM39A-203ENST00000461654 MCF2L2Q86YR7 1114 aa17.28■□□□□ 0.36
TMEM39A-203ENST00000461654 DIS3Q9Y2L1 958 aaKnown RBP17.28■□□□□ 0.36
TMEM39A-203ENST00000461654 DDX49Q9Y6V7 483 aaKnown RBP17.28■□□□□ 0.36
TMEM39A-203ENST00000461654 SPDYE3A6NKU9 549 aa17.27■□□□□ 0.36
TMEM39A-203ENST00000461654 SPTLC2O15270 562 aa17.27■□□□□ 0.36
TMEM39A-203ENST00000461654 TRAK2O60296 914 aa17.27■□□□□ 0.36
TMEM39A-203ENST00000461654 CYP2C19P33261 490 aa17.27■□□□□ 0.36
TMEM39A-203ENST00000461654 AP3B2Q13367 1082 aa17.27■□□□□ 0.36
TMEM39A-203ENST00000461654 SLC39A14Q15043 492 aa17.27■□□□□ 0.36
TMEM39A-203ENST00000461654 LINC00301Q8NCQ3 95 aa17.27■□□□□ 0.36
TMEM39A-203ENST00000461654 DIS3LQ8TF46 1054 aaKnown RBP17.27■□□□□ 0.36
TMEM39A-203ENST00000461654 TEX13BQ9BXU2 312 aa17.27■□□□□ 0.36
TMEM39A-203ENST00000461654 FTOQ9C0B1 505 aaKnown RBP eCLIP17.27■□□□□ 0.36
TMEM39A-203ENST00000461654 RAVER2Q9HCJ3 691 aaKnown RBP17.27■□□□□ 0.36
TMEM39A-203ENST00000461654 FAM205CA6NFA0 338 aa17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 GCOM1H8Y6P7 765 aaPredicted RBP17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 POLR2MP0CAP2 368 aa17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 COL6A1P12109 1028 aa17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 ALAS1P13196 640 aa17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 TOB1P50616 345 aaPredicted RBP17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 KCTD2Q14681 263 aa17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 UBE2SQ16763 222 aa17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 INF2Q27J81 1249 aa17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 EARS2Q5JPH6 523 aaKnown RBP17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 HABP4Q5JVS0 413 aaKnown RBP17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 NEK8Q86SG6 692 aa17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 MAML3Q96JK9 1138 aa17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 AGBL1Q96MI9 1066 aa17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 MMP19Q99542 508 aa17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 NAP1L4Q99733 375 aaKnown RBP17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 C11orf49Q9H6J7 331 aa17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 EHMT1Q9H9B1 1298 aa17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 TMEM260Q9NX78 707 aa17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 DDX20Q9UHI6 824 aaKnown RBP17.26■□□□□ 0.35
TMEM39A-203ENST00000461654 PIK3CDO00329 1044 aa17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 EVI5O60447 810 aa17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 PPP6R2O75170 966 aa17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 CFBP00751 764 aa17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 CYBAP13498 195 aa17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 CLK2P49760 499 aaKnown RBP17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 ZNF792Q3KQV3 632 aa17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 TKFCQ3LXA3 575 aa17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 TPRNQ4KMQ1 711 aa17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 USP17L6PQ6QN14 398 aa17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 SAMD3Q8N6K7 520 aa17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 TRPV1Q8NER1 839 aa17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 ANP32EQ9BTT0 268 aa17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 NRBP1Q9UHY1 535 aa17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 PCDHB6Q9Y5E3 794 aa17.25■□□□□ 0.35
TMEM39A-203ENST00000461654 ZNF536O15090 1300 aa17.24■□□□□ 0.35
TMEM39A-203ENST00000461654 ADAMTS3O15072 1205 aa17.24■□□□□ 0.35
TMEM39A-203ENST00000461654 ORC2Q13416 577 aaPredicted RBP17.24■□□□□ 0.35
TMEM39A-203ENST00000461654 ZNF174Q15697 407 aa17.24■□□□□ 0.35
TMEM39A-203ENST00000461654 SNRNP48Q6IEG0 339 aaKnown RBP17.24■□□□□ 0.35
TMEM39A-203ENST00000461654 TBCKQ8TEA7 893 aa17.24■□□□□ 0.35
TMEM39A-203ENST00000461654 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.24■□□□□ 0.35
TMEM39A-203ENST00000461654 MAP3K20Q9NYL2 800 aaKnown RBP17.24■□□□□ 0.35
TMEM39A-203ENST00000461654 COLQQ9Y215 455 aaPredicted RBP17.24■□□□□ 0.35
TMEM39A-203ENST00000461654 MEIS2O14770 477 aa17.23■□□□□ 0.35
TMEM39A-203ENST00000461654 SEPT4O43236 478 aa17.23■□□□□ 0.35
TMEM39A-203ENST00000461654 GADD45BO75293 160 aaPredicted RBP17.23■□□□□ 0.35
TMEM39A-203ENST00000461654 MCM7P33993 719 aa17.23■□□□□ 0.35
TMEM39A-203ENST00000461654 PTPAQ15257 358 aa17.23■□□□□ 0.35
TMEM39A-203ENST00000461654 KLHL40Q2TBA0 621 aa17.23■□□□□ 0.35
TMEM39A-203ENST00000461654 LETM2Q2VYF4 491 aa17.23■□□□□ 0.35
TMEM39A-203ENST00000461654 TRERF1Q96PN7 1200 aa17.23■□□□□ 0.35
TMEM39A-203ENST00000461654 ANO3Q9BYT9 981 aa17.23■□□□□ 0.35
TMEM39A-203ENST00000461654 HOMER2Q9NSB8 354 aa17.23■□□□□ 0.35
TMEM39A-203ENST00000461654 RIPK3Q9Y572 518 aa17.23■□□□□ 0.35
TMEM39A-203ENST00000461654 MYH15Q9Y2K3 1946 aa17.23■□□□□ 0.35
TMEM39A-203ENST00000461654 COL11A1P12107 1806 aaPredicted RBP17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 DNAJC25-GNG10A0A024R161 153 aa17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 LAD1O00515 517 aa17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 CCNT1O60563 726 aaKnown RBP17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 CUTAO60888 179 aa17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 MARCKSP29966 332 aaPredicted RBP17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 CNGA1P29973 690 aa17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 ADALQ6DHV7 355 aa17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 MSL3Q8N5Y2 521 aaKnown RBP17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 KRI1Q8N9T8 703 aaKnown RBP17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 SYAP1Q96A49 352 aaPredicted RBP17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 MAF1Q9H063 256 aa17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 PRO3102Q9H379 93 aa17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 RNF146Q9NTX7 359 aa17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 PCDHA7Q9UN72 937 aa17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 MORC2Q9Y6X9 1032 aaPredicted RBP17.22■□□□□ 0.35
TMEM39A-203ENST00000461654 OPLAHO14841 1288 aa17.21■□□□□ 0.35
TMEM39A-203ENST00000461654 PGK2P07205 417 aa17.21■□□□□ 0.35
TMEM39A-203ENST00000461654 GCFC2P16383 781 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms