RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 SALL1Q9NSC2 1324 aa6.23□□□□□ -1.41
BRCA1-206ENST00000461574 COL2A1P02458 1487 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-206ENST00000461574 RFX7Q2KHR2 1363 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 J3QW42 95 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 EYA2O00167 538 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 FOSL2P15408 326 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 FGFR2P21802 821 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 CNGA1P29973 690 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 CCND3P30281 292 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-206ENST00000461574 MAPK4P31152 587 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 RGS2P41220 211 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 CACNB2Q08289 660 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-206ENST00000461574 TMEM132AQ24JP5 1023 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 MAP3K21Q5TCX8 1036 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 WDR78Q5VTH9 848 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 SPTY2D1Q68D10 685 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-206ENST00000461574 WDR63Q8IWG1 891 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 ANKRD44Q8N8A2 993 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 GPRC5AQ8NFJ5 357 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 PLD4Q96BZ4 506 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 MYO19Q96H55 970 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 CDX2Q99626 313 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-206ENST00000461574 NOL10Q9BSC4 688 aaKnown RBP6.22□□□□□ -1.41
BRCA1-206ENST00000461574 PAGR1Q9BTK6 254 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 OSBPL5Q9H0X9 879 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-206ENST00000461574 AKTIPQ9H8T0 292 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 PRDM5Q9NQX1 630 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-206ENST00000461574 LRFN2Q9ULH4 789 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 CDH23Q9H251 3354 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 UTYO14607 1347 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 GAKO14976 1311 aa6.22□□□□□ -1.41
BRCA1-206ENST00000461574 XYLBO75191 536 aa6.21□□□□□ -1.42
BRCA1-206ENST00000461574 GLRX3O76003 335 aaKnown RBP6.21□□□□□ -1.42
BRCA1-206ENST00000461574 COL6A1P12109 1028 aa6.21□□□□□ -1.42
BRCA1-206ENST00000461574 XRCC5P13010 732 aaKnown RBP6.21□□□□□ -1.42
BRCA1-206ENST00000461574 ARID4AP29374 1257 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-206ENST00000461574 PHKA1P46020 1223 aa6.21□□□□□ -1.42
BRCA1-206ENST00000461574 HERVK_113P62684 666 aa6.21□□□□□ -1.42
BRCA1-206ENST00000461574 MFSD14CQ5VZR4 134 aa6.21□□□□□ -1.42
BRCA1-206ENST00000461574 GDF6Q6KF10 455 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-206ENST00000461574 KRTAP19-1Q8IUB9 90 aa6.21□□□□□ -1.42
BRCA1-206ENST00000461574 MYLIPQ8WY64 445 aa6.21□□□□□ -1.42
BRCA1-206ENST00000461574 VTI1AQ96AJ9 217 aa6.21□□□□□ -1.42
BRCA1-206ENST00000461574 APBA2Q99767 749 aa6.21□□□□□ -1.42
BRCA1-206ENST00000461574 VRTNQ9H8Y1 702 aa6.21□□□□□ -1.42
BRCA1-206ENST00000461574 DDX4Q9NQI0 724 aaKnown RBP6.21□□□□□ -1.42
BRCA1-206ENST00000461574 MORF4L1Q9UBU8 362 aa6.21□□□□□ -1.42
BRCA1-206ENST00000461574 GJD2Q9UKL4 321 aa6.21□□□□□ -1.42
BRCA1-206ENST00000461574 ATP11BQ9Y2G3 1177 aa6.21□□□□□ -1.42
BRCA1-206ENST00000461574 MROH7-TTC4A0A0A0MT08 1334 aa6.21□□□□□ -1.42
BRCA1-206ENST00000461574 MUC3AQ02505 3323 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 TTC28Q96AY4 2481 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 CDK5RAP2Q96SN8 1893 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 F8W735 103 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-206ENST00000461574 MSCO60682 206 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 ASNSP08243 561 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 FSTP19883 344 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 CAP2P40123 477 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 ERVK-24P63145 666 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 GSTO1P78417 241 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 RASGRF1Q13972 1273 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 CCL14Q16627 93 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 ERICH6Q7L0X2 663 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 GPR142Q7Z601 462 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 PLEKHH3Q7Z736 793 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 RGL4Q8IZJ4 473 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 CMTR1Q8N1G2 835 aaKnown RBP6.2□□□□□ -1.42
BRCA1-206ENST00000461574 TMEM130Q8N3G9 435 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 CRACR2BQ8N4Y2 399 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-206ENST00000461574 IL22RA1Q8N6P7 574 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 GTF3C2Q8WUA4 911 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-206ENST00000461574 CALR3Q96L12 384 aaKnown RBP6.2□□□□□ -1.42
BRCA1-206ENST00000461574 NSUN5Q96P11 429 aaKnown RBP6.2□□□□□ -1.42
BRCA1-206ENST00000461574 FEZ1Q99689 392 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 MRPL18Q9H0U6 180 aaKnown RBP6.2□□□□□ -1.42
BRCA1-206ENST00000461574 PCMTD2Q9NV79 361 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 HERC5Q9UII4 1024 aaKnown RBP6.2□□□□□ -1.42
BRCA1-206ENST00000461574 IVNS1ABPQ9Y6Y0 642 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 RLFQ13129 1914 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 BDP1A6H8Y1 2624 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 PTPRCP08575 1304 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 FOCADQ5VW36 1801 aa6.2□□□□□ -1.42
BRCA1-206ENST00000461574 TMEM265A0A087WTH1 108 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 KBTBD13C9JR72 458 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 DNM1LO00429 736 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 PEX10O60683 326 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 MMP20O60882 483 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 CIAO1O76071 339 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 LDHCP07864 332 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 UBTFL1P0CB47 393 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-206ENST00000461574 SSTR4P31391 388 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 BACE1P56817 501 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 RTP1P59025 263 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 CCNA1P78396 465 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 ATP2B2Q01814 1243 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 MECOMQ03112 1051 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 SETDB1Q15047 1291 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 SHHQ15465 462 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 GORABQ5T7V8 394 aa6.19□□□□□ -1.42
BRCA1-206ENST00000461574 TREML1Q86YW5 311 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms