RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 POLR3GO15318 223 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-219ENST00000461159 RTN3O95197 1032 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-219ENST00000461159 MYL1P05976 194 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 HLA-DOAP06340 250 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 TOP1P11387 765 aaKnown RBP9.45□□□□□ -0.9
HDAC9-219ENST00000461159 LMNB1P20700 586 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 MYL5Q02045 173 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 TNIP1Q15025 636 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 SFMBT2Q5VUG0 894 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 TRIM65Q6PJ69 517 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 CATIPQ7Z7H3 387 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 GPR161Q8N6U8 529 aaKnown RBP9.45□□□□□ -0.9
HDAC9-219ENST00000461159 PNMA1Q8ND90 353 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 N4BP2L2Q92802 583 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-219ENST00000461159 TMEM47Q9BQJ4 181 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 IDI2Q9BXS1 227 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 MYO3BQ8WXR4 1341 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 KIF28PB7ZC32 967 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 ARHGAP6O43182 974 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 PCP11498 1178 aaKnown RBP9.44□□□□□ -0.9
HDAC9-219ENST00000461159 PFKFB1P16118 471 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 ARMC3Q5W041 872 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 ANO1Q5XXA6 986 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 USP17L2Q6R6M4 530 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 TRPM4Q8TD43 1214 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 TRAIPQ9BWF2 469 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 MRIQ9BWK5 157 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 KAT14Q9H8E8 782 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 TMOD2Q9NZR1 351 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 PUF60Q9UHX1 559 aaKnown RBP9.44□□□□□ -0.9
HDAC9-219ENST00000461159 TMEM98Q9Y2Y6 226 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 STK24Q9Y6E0 443 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 NID2Q14112 1375 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 ROBO3Q96MS0 1386 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 XBP1P17861 261 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 HNRNPH1P31943 449 aaKnown RBP9.44□□□□□ -0.9
HDAC9-219ENST00000461159 STIP1P31948 543 aaKnown RBP9.44□□□□□ -0.9
HDAC9-219ENST00000461159 COPB2P35606 906 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 INF2Q27J81 1249 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 SDCCAG8Q86SQ7 713 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-219ENST00000461159 VSTM4Q8IW00 320 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 REXO1L1PQ8IX06 675 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 MYOCDQ8IZQ8 938 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 HDAC7Q8WUI4 952 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 BHMTQ93088 406 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 SPATA7Q9P0W8 599 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 PI4KBQ9UBF8 816 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 KCNJ14Q9UNX9 436 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 ECM29Q5VYK3 1845 aa9.44□□□□□ -0.9
HDAC9-219ENST00000461159 SYKP43405 635 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 FUT2Q10981 343 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 E2F5Q15329 346 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 SLC35G1Q2M3R5 365 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 SPDYE2Q495Y8 402 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 ZNF394Q53GI3 561 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 C9orf131Q5VYM1 1079 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 KIAA1328Q86T90 577 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 ANKRD13BQ86YJ7 626 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 IFNLR1Q8IU57 520 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-219ENST00000461159 EZH1Q92800 747 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-219ENST00000461159 VPS33BQ9H267 617 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 VAT1LQ9HCJ6 419 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 ARFGAP3Q9NP61 516 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 TUBE1Q9UJT0 475 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 V9GY48 417 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-219ENST00000461159 FRMPD2Q68DX3 1309 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-219ENST00000461159 ADAMTS3O15072 1205 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 TPPPO94811 219 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 ATP1A3P13637 1013 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 OAS2P29728 719 aaKnown RBP9.43□□□□□ -0.9
HDAC9-219ENST00000461159 GCKP35557 465 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 NT5C2P49902 561 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 SLC7A5Q01650 507 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 GNL2Q13823 731 aaKnown RBP9.43□□□□□ -0.9
HDAC9-219ENST00000461159 PRKG1Q13976 671 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 SEPT2Q15019 361 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 CERKLQ49MI3 558 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-219ENST00000461159 CC2D1AQ6P1N0 951 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-219ENST00000461159 SRBD1Q8N5C6 995 aaKnown RBP9.43□□□□□ -0.9
HDAC9-219ENST00000461159 NEDD1Q8NHV4 660 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 PARD3BQ8TEW8 1205 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 ALG1Q9BT22 464 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 HACL1Q9UJ83 578 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 RABL2BQ9UNT1 228 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 PPP2R2CQ9Y2T4 447 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 CNTNAP1P78357 1384 aa9.43□□□□□ -0.9
HDAC9-219ENST00000461159 SIPA1L1O43166 1804 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 SEC31AO94979 1220 aaKnown RBP9.42□□□□□ -0.9
HDAC9-219ENST00000461159 GH2P01242 217 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 NAT2P11245 290 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 RCAN1P53805 252 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 ZBED6P86452 979 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 PPP2R3AQ06190 1150 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 SMC1AQ14683 1233 aaKnown RBP9.42□□□□□ -0.9
HDAC9-219ENST00000461159 SLC39A14Q15043 492 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 CCDC102AQ96A19 550 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.42□□□□□ -0.9
HDAC9-219ENST00000461159 ZNF287Q9HBT7 754 aa9.42□□□□□ -0.9
HDAC9-219ENST00000461159 TPX2Q9ULW0 747 aaKnown RBP9.42□□□□□ -0.9
HDAC9-219ENST00000461159 LTBP3Q9NS15 1303 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms