RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 ST7Q9NRC1 585 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 EMILIN3Q9NT22 766 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 FAM208AQ9UK61 1670 aaKnown RBP13.25□□□□□ -0.29
CPNE6-202ENST00000460657 UBE2SQ16763 222 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 DHX37Q8IY37 1157 aaKnown RBP13.25□□□□□ -0.29
CPNE6-202ENST00000460657 CHP1Q99653 195 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 FMN2Q9NZ56 1722 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 NFAT5O94916 1531 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 HEXIM1O94992 359 aaKnown RBP13.24□□□□□ -0.29
CPNE6-202ENST00000460657 CTNNA1P35221 906 aaKnown RBP13.24□□□□□ -0.29
CPNE6-202ENST00000460657 PPP2R5EQ16537 467 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 ARHGAP44Q17R89 818 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 TMC4Q7Z404 712 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 KIFAP3Q92845 792 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 RRP15Q9Y3B9 282 aaKnown RBP13.24□□□□□ -0.29
CPNE6-202ENST00000460657 USP17L5A8MUK1 530 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 SERPINB2P05120 415 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 PLA2G4BP0C869 781 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
CPNE6-202ENST00000460657 CYP4A11Q02928 519 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 DOK7Q18PE1 504 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 KRT71Q3SY84 523 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 CROCCP2Q86T23 111 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 PROM2Q8N271 834 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 KCND1Q9NSA2 647 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 AFPP02771 609 aaKnown RBP13.24□□□□□ -0.29
CPNE6-202ENST00000460657 GPR101Q96P66 508 aaPredicted RBP13.24□□□□□ -0.29
CPNE6-202ENST00000460657 TRIM9Q9C026 710 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 SAMD15Q9P1V8 674 aa13.24□□□□□ -0.29
CPNE6-202ENST00000460657 POTEMA6NI47 508 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 RHOBTB3O94955 611 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 ATP1A2P50993 1020 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 CYP2J2P51589 502 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 USP14P54578 494 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 GUF1Q8N442 669 aaKnown RBP13.23□□□□□ -0.29
CPNE6-202ENST00000460657 NEDD1Q8NHV4 660 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 CEP95Q96GE4 821 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 EPB41L5Q9HCM4 733 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 RABGAP1Q9Y3P9 1069 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 A0A1W2PRG0 241 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 ANKRD62A6NC57 917 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 ABCB4P21439 1286 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 SMTNP53814 917 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 SF3B2Q13435 895 aaKnown RBP13.23□□□□□ -0.29
CPNE6-202ENST00000460657 SEC23AQ15436 765 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 GRIPAP1Q4V328 841 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 MSL1Q68DK7 614 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 LRP10Q7Z4F1 713 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 FOXP4Q8IVH2 680 aaPredicted RBP13.23□□□□□ -0.29
CPNE6-202ENST00000460657 GJA10Q969M2 543 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 SPZ1Q9BXG8 430 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 FAM217BQ9NTX9 383 aaPredicted RBP13.23□□□□□ -0.29
CPNE6-202ENST00000460657 HDAC6Q9UBN7 1215 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 ZNF18P17022 549 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 MAEAQ7L5Y9 396 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 FBXO33Q7Z6M2 555 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 KIAA0825Q8IV33 1275 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 CCDC50Q8IVM0 306 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 FAM178BQ8IXR5 827 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 FAM133AQ8N9E0 248 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 CD209Q9NNX6 404 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 EXOC7Q9UPT5 735 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 EEF2P13639 858 aaKnown RBP13.23□□□□□ -0.29
CPNE6-202ENST00000460657 VSNL1P62760 191 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 EMBQ6PCB8 327 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 RAD54LQ92698 747 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 KANSL2Q9H9L4 492 aa13.23□□□□□ -0.29
CPNE6-202ENST00000460657 FAM237AA0A1B0GTK4 181 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 LRRC53A6NM62 1247 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 DDX39AO00148 427 aaKnown RBP13.22□□□□□ -0.29
CPNE6-202ENST00000460657 PPFIA4O75335 1185 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 FTCDO95954 541 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 FERP16591 822 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 ZRSR2Q15696 482 aaKnown RBP13.22□□□□□ -0.29
CPNE6-202ENST00000460657 PTPROQ16827 1216 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 PPP4R3CPQ6ZMV5 832 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 RDH13Q8NBN7 331 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 IMPG2Q9BZV3 1241 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 CCDC169A6NNP5 214 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 E7EVH7 732 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 ATP1A1P05023 1023 aaKnown RBP13.22□□□□□ -0.29
CPNE6-202ENST00000460657 SRGNP10124 158 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 CD44P16070 742 aaKnown RBP13.22□□□□□ -0.29
CPNE6-202ENST00000460657 ZYXQ15942 572 aaKnown RBP13.22□□□□□ -0.29
CPNE6-202ENST00000460657 C10orf76Q5T2E6 689 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 ANKRD40Q6AI12 368 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 CCDC91Q7Z6B0 441 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 CHURC1Q8WUH1 139 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
CPNE6-202ENST00000460657 PPEF1O14829 653 aaPredicted RBP13.22□□□□□ -0.29
CPNE6-202ENST00000460657 KCNQ2O43526 872 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 FCER1AP12319 257 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 ALS2CLQ60I27 953 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 GSTA5Q7RTV2 222 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 CABS1Q96KC9 395 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 RIOK1Q9BRS2 568 aaKnown RBP13.22□□□□□ -0.29
CPNE6-202ENST00000460657 CEP72Q9P209 647 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 STIM2Q9P246 746 aa13.22□□□□□ -0.29
CPNE6-202ENST00000460657 CYP2C19P33261 490 aa13.21□□□□□ -0.29
CPNE6-202ENST00000460657 GJC1P36383 396 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms