RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 KLF18A0A0U1RQI7 1052 aa26.51■■□□□ 1.83
PTPN4-208ENST00000460289 PIK3CDO00329 1044 aa26.51■■□□□ 1.83
PTPN4-208ENST00000460289 MYL3P08590 195 aa26.51■■□□□ 1.83
PTPN4-208ENST00000460289 CCND2P30279 289 aa26.51■■□□□ 1.83
PTPN4-208ENST00000460289 PURAQ00577 322 aaKnown RBP26.51■■□□□ 1.83
PTPN4-208ENST00000460289 FAM126BQ8IXS8 530 aa26.51■■□□□ 1.83
PTPN4-208ENST00000460289 MTG1Q9BT17 334 aaPredicted RBP26.51■■□□□ 1.83
PTPN4-208ENST00000460289 DDX41Q9UJV9 622 aaKnown RBP26.51■■□□□ 1.83
PTPN4-208ENST00000460289 MRVI1Q9Y6F6 885 aa26.51■■□□□ 1.83
PTPN4-208ENST00000460289 CPA1P15085 419 aa26.5■■□□□ 1.83
PTPN4-208ENST00000460289 LRIT3Q3SXY7 679 aa26.5■■□□□ 1.83
PTPN4-208ENST00000460289 Q6ZUG5 572 aa26.5■■□□□ 1.83
PTPN4-208ENST00000460289 FBXL16Q8N461 479 aa26.5■■□□□ 1.83
PTPN4-208ENST00000460289 GRIN2DO15399 1336 aa26.49■■□□□ 1.83
PTPN4-208ENST00000460289 GOLGA8AA7E2F4 631 aa26.49■■□□□ 1.83
PTPN4-208ENST00000460289 GOLGA8BA8MQT2 603 aa26.49■■□□□ 1.83
PTPN4-208ENST00000460289 PSMC6P62333 389 aa26.49■■□□□ 1.83
PTPN4-208ENST00000460289 USP26Q9BXU7 913 aa26.49■■□□□ 1.83
PTPN4-208ENST00000460289 PSTPIP2Q9H939 334 aa26.49■■□□□ 1.83
PTPN4-208ENST00000460289 TBX21Q9UL17 535 aa26.49■■□□□ 1.83
PTPN4-208ENST00000460289 NAP1L2Q9ULW6 460 aaPredicted RBP26.49■■□□□ 1.83
PTPN4-208ENST00000460289 CCDC196A0A1B0GTZ2 297 aa26.48■■□□□ 1.83
PTPN4-208ENST00000460289 hCG_1642624A0A1W2PR95 340 aa26.48■■□□□ 1.83
PTPN4-208ENST00000460289 MEIS2O14770 477 aa26.48■■□□□ 1.83
PTPN4-208ENST00000460289 STAM2O75886 525 aa26.48■■□□□ 1.83
PTPN4-208ENST00000460289 TIMP1P01033 207 aa26.48■■□□□ 1.83
PTPN4-208ENST00000460289 CD4P01730 458 aa26.48■■□□□ 1.83
PTPN4-208ENST00000460289 TGFB3P10600 412 aa26.48■■□□□ 1.83
PTPN4-208ENST00000460289 RPS6KB1P23443 525 aa26.48■■□□□ 1.83
PTPN4-208ENST00000460289 ITGB8P26012 769 aa26.48■■□□□ 1.83
PTPN4-208ENST00000460289 LAMC2Q13753 1193 aa26.48■■□□□ 1.83
PTPN4-208ENST00000460289 USP17L6PQ6QN14 398 aa26.48■■□□□ 1.83
PTPN4-208ENST00000460289 RGS20O76081 388 aa26.47■■□□□ 1.83
PTPN4-208ENST00000460289 CASTP20810 708 aaKnown RBP26.47■■□□□ 1.83
PTPN4-208ENST00000460289 ARHGAP1Q07960 439 aa26.47■■□□□ 1.83
PTPN4-208ENST00000460289 IL31RAQ8NI17 732 aa26.47■■□□□ 1.83
PTPN4-208ENST00000460289 AFG1LQ8WV93 481 aa26.47■■□□□ 1.83
PTPN4-208ENST00000460289 BRF1Q92994 677 aa26.47■■□□□ 1.83
PTPN4-208ENST00000460289 EMID1Q96A84 441 aaPredicted RBP26.47■■□□□ 1.83
PTPN4-208ENST00000460289 FRMPD4Q14CM0 1322 aa26.46■■□□□ 1.83
PTPN4-208ENST00000460289 APOBRQ0VD83 1088 aa26.46■■□□□ 1.83
PTPN4-208ENST00000460289 GNPTABQ3T906 1256 aa26.46■■□□□ 1.83
PTPN4-208ENST00000460289 HEATR3Q7Z4Q2 680 aa26.46■■□□□ 1.83
PTPN4-208ENST00000460289 DHX37Q8IY37 1157 aaKnown RBP26.46■■□□□ 1.83
PTPN4-208ENST00000460289 V9GY48 417 aaPredicted RBP26.46■■□□□ 1.83
PTPN4-208ENST00000460289 CNTNAP5Q8WYK1 1306 aa26.45■■□□□ 1.83
PTPN4-208ENST00000460289 LTBP2Q14767 1821 aa26.45■■□□□ 1.82
PTPN4-208ENST00000460289 METAP2P50579 478 aaKnown RBP eCLIP26.45■■□□□ 1.82
PTPN4-208ENST00000460289 FPGSQ05932 587 aa26.45■■□□□ 1.82
PTPN4-208ENST00000460289 FUT2Q10981 343 aa26.45■■□□□ 1.82
PTPN4-208ENST00000460289 XRRA1Q6P2D8 792 aa26.45■■□□□ 1.82
PTPN4-208ENST00000460289 AGXT2Q9BYV1 514 aa26.45■■□□□ 1.82
PTPN4-208ENST00000460289 KIAA1217Q5T5P2 1943 aa26.45■■□□□ 1.82
PTPN4-208ENST00000460289 hCG_1984214I3L0E3 225 aa26.44■■□□□ 1.82
PTPN4-208ENST00000460289 MMP3P08254 477 aa26.44■■□□□ 1.82
PTPN4-208ENST00000460289 SUPT20HL2P0C7V6 817 aa26.44■■□□□ 1.82
PTPN4-208ENST00000460289 DGKDQ16760 1214 aa26.44■■□□□ 1.82
PTPN4-208ENST00000460289 MFSD5Q6N075 450 aa26.44■■□□□ 1.82
PTPN4-208ENST00000460289 RUFY3Q7L099 469 aa26.44■■□□□ 1.82
PTPN4-208ENST00000460289 TEX2Q8IWB9 1127 aa26.44■■□□□ 1.82
PTPN4-208ENST00000460289 ZNF713Q8N859 430 aaPredicted RBP26.44■■□□□ 1.82
PTPN4-208ENST00000460289 ALDH8A1Q9H2A2 487 aaPredicted RBP26.44■■□□□ 1.82
PTPN4-208ENST00000460289 FAM217BQ9NTX9 383 aaPredicted RBP26.44■■□□□ 1.82
PTPN4-208ENST00000460289 SOX1O00570 391 aaPredicted RBP26.43■■□□□ 1.82
PTPN4-208ENST00000460289 CDC27P30260 824 aa26.43■■□□□ 1.82
PTPN4-208ENST00000460289 MRPS9P82933 396 aaKnown RBP26.43■■□□□ 1.82
PTPN4-208ENST00000460289 NBPF20Q3BBV1 942 aa26.43■■□□□ 1.82
PTPN4-208ENST00000460289 PCNX4Q63HM2 1172 aa26.43■■□□□ 1.82
PTPN4-208ENST00000460289 NFRKBQ6P4R8 1299 aa26.43■■□□□ 1.82
PTPN4-208ENST00000460289 PPTC7Q8NI37 304 aa26.43■■□□□ 1.82
PTPN4-208ENST00000460289 GPKOWQ92917 476 aaPredicted RBP eCLIP26.43■■□□□ 1.82
PTPN4-208ENST00000460289 TRPV6Q9H1D0 765 aa26.43■■□□□ 1.82
PTPN4-208ENST00000460289 ZSWIM6Q9HCJ5 1215 aa26.43■■□□□ 1.82
PTPN4-208ENST00000460289 CYP46A1Q9Y6A2 500 aa26.43■■□□□ 1.82
PTPN4-208ENST00000460289 B4GALT4O60513 344 aa26.42■■□□□ 1.82
PTPN4-208ENST00000460289 ADD1P35611 737 aaKnown RBP26.42■■□□□ 1.82
PTPN4-208ENST00000460289 PTPN11Q06124 597 aaPredicted RBP26.42■■□□□ 1.82
PTPN4-208ENST00000460289 SHHQ15465 462 aa26.42■■□□□ 1.82
PTPN4-208ENST00000460289 CELF3Q5SZQ8 465 aaKnown RBP26.42■■□□□ 1.82
PTPN4-208ENST00000460289 MYSM1Q5VVJ2 828 aa26.42■■□□□ 1.82
PTPN4-208ENST00000460289 WWC2Q6AWC2 1192 aa26.42■■□□□ 1.82
PTPN4-208ENST00000460289 PPP1R18Q6NYC8 613 aa26.42■■□□□ 1.82
PTPN4-208ENST00000460289 TMEM199Q8N511 208 aa26.42■■□□□ 1.82
PTPN4-208ENST00000460289 ZFP91Q96JP5 570 aaPredicted RBP26.42■■□□□ 1.82
PTPN4-208ENST00000460289 INPP4AQ96PE3 977 aaPredicted RBP26.42■■□□□ 1.82
PTPN4-208ENST00000460289 TM6SF1Q9BZW5 370 aa26.42■■□□□ 1.82
PTPN4-208ENST00000460289 SPDYE3A6NKU9 549 aa26.41■■□□□ 1.82
PTPN4-208ENST00000460289 ICAM3P32942 547 aa26.41■■□□□ 1.82
PTPN4-208ENST00000460289 NAPAP54920 295 aa26.41■■□□□ 1.82
PTPN4-208ENST00000460289 FAM47CQ5HY64 1035 aa26.41■■□□□ 1.82
PTPN4-208ENST00000460289 GPR153Q6NV75 609 aa26.41■■□□□ 1.82
PTPN4-208ENST00000460289 MLXIPQ9HAP2 919 aa26.41■■□□□ 1.82
PTPN4-208ENST00000460289 RTEL1Q9NZ71 1219 aa26.41■■□□□ 1.82
PTPN4-208ENST00000460289 EIF5BO60841 1220 aaKnown RBP26.4■■□□□ 1.82
PTPN4-208ENST00000460289 PPFIA4O75335 1185 aa26.4■■□□□ 1.82
PTPN4-208ENST00000460289 GGPS1O95749 300 aa26.4■■□□□ 1.82
PTPN4-208ENST00000460289 LRCH3Q96II8 777 aa26.4■■□□□ 1.82
PTPN4-208ENST00000460289 SPATA33Q96N06 139 aa26.4■■□□□ 1.82
PTPN4-208ENST00000460289 PPP1R12CQ9BZL4 782 aa26.4■■□□□ 1.82
PTPN4-208ENST00000460289 GLT8D2Q9H1C3 349 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms