RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 TNFAIP2Q03169 654 aa11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 ANKRD1Q15327 319 aa11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 ARHGEF16Q5VV41 709 aa11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 ANO1Q5XXA6 986 aa11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 PPP1R18Q6NYC8 613 aa11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 CPLX2Q6PUV4 134 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 NOL8Q76FK4 1167 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 HEATR3Q7Z4Q2 680 aa11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 UBE2Q1Q7Z7E8 422 aa11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 TEX2Q8IWB9 1127 aa11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 FBXO16Q8IX29 292 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 CCDC82Q8N4S0 544 aa11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 SRBD1Q8N5C6 995 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 SMARCC2Q8TAQ2 1214 aa11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 SYTL5Q8TDW5 730 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 MORC4Q8TE76 937 aa11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 IWS1Q96ST2 819 aa11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 RMDN3Q96TC7 470 aa11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 UPF3BQ9BZI7 483 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 NR2E3Q9Y5X4 410 aa11.93□□□□□ -0.5
HLA-DQB1-207ENST00000460185 ASTN1O14525 1302 aa11.92□□□□□ -0.5
HLA-DQB1-207ENST00000460185 CEP290O15078 2479 aa11.92□□□□□ -0.5
HLA-DQB1-207ENST00000460185 EDNRBP24530 442 aa11.92□□□□□ -0.5
HLA-DQB1-207ENST00000460185 STXBP2Q15833 593 aa11.92□□□□□ -0.5
HLA-DQB1-207ENST00000460185 EEPD1Q7L9B9 569 aa11.92□□□□□ -0.5
HLA-DQB1-207ENST00000460185 CMTR1Q8N1G2 835 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB1-207ENST00000460185 PCSK9Q8NBP7 692 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB1-207ENST00000460185 DIS3LQ8TF46 1054 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB1-207ENST00000460185 SCFD2Q8WU76 684 aa11.92□□□□□ -0.5
HLA-DQB1-207ENST00000460185 CCDC12Q8WUD4 166 aaPredicted RBP11.92□□□□□ -0.5
HLA-DQB1-207ENST00000460185 DPF3Q92784 378 aa11.92□□□□□ -0.5
HLA-DQB1-207ENST00000460185 AP5M1Q9H0R1 490 aa11.92□□□□□ -0.5
HLA-DQB1-207ENST00000460185 EHMT1Q9H9B1 1298 aa11.92□□□□□ -0.5
HLA-DQB1-207ENST00000460185 PDRG1Q9NUG6 133 aa11.92□□□□□ -0.5
HLA-DQB1-207ENST00000460185 CPLX1O14810 134 aa11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 NKRFO15226 690 aaKnown RBP eCLIP11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 C6orf222P0C671 652 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 EIF2AK2P19525 551 aaKnown RBP11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 ADCYAP1R1P41586 468 aa11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 FOSBP53539 338 aa11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 NAPAP54920 295 aa11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 TTLL4Q14679 1199 aa11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 LRRC41Q15345 812 aa11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 SLC35G1Q2M3R5 365 aa11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 BRDTQ58F21 947 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 GJC2Q5T442 439 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 PRPF38BQ5VTL8 546 aaKnown RBP11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 IQSEC1Q6DN90 963 aa11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 TLK2Q86UE8 772 aa11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 TRIM22Q8IYM9 498 aa11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 PURBQ96QR8 312 aaKnown RBP11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 KATNBL1Q9H079 304 aa11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 GLT8D2Q9H1C3 349 aa11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 PXMP2Q9NR77 195 aa11.91□□□□□ -0.5
HLA-DQB1-207ENST00000460185 MOXD2PA6NHM9 499 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 SPDYE3A6NKU9 549 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 PIK3CDO00329 1044 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 OPLAHO14841 1288 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 ZEB2O60315 1214 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 ADAMTS4O75173 837 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 CDKL5O76039 1030 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 PGK1P00558 417 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 COL6A1P12109 1028 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 CST5P28325 142 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 CCND2P30279 289 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 HOXA13P31271 388 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 EVCP57679 992 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 GJA9P57773 515 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 GNPTABQ3T906 1256 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 C8orf34Q49A92 452 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 FCHSD1Q86WN1 690 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 CCDC148Q8NFR7 591 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 BBXQ8WY36 941 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 LENG1Q96BZ8 264 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 ZNF274Q96GC6 653 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 TAAR1Q96RJ0 339 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 TSEN34Q9BSV6 310 aaKnown RBP11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 RNF26Q9BY78 433 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 SENP6Q9GZR1 1112 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 UPF3AQ9H1J1 476 aaKnown RBP11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 COL20A1Q9P218 1284 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 Q9Y3F1 56 aa11.9□□□□□ -0.5
HLA-DQB1-207ENST00000460185 DOCK5Q9H7D0 1870 aa11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 hCG_1642624A0A1W2PR95 340 aa11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 EIF3JO75822 258 aaKnown RBP11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 STAM2O75886 525 aa11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 NR3C2P08235 984 aa11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 PDIA3P30101 505 aaKnown RBP11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 CDC27P30260 824 aa11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 CPT1AP50416 773 aa11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 TOB2Q14106 344 aaPredicted RBP11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 DUSP28Q4G0W2 176 aa11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 TAPT1Q6NXT6 567 aa11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 KCNV1Q6PIU1 500 aa11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 TBC1D5Q92609 795 aa11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 GPKOWQ92917 476 aaPredicted RBP eCLIP11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 IL17RAQ96F46 866 aa11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 GLT1D1Q96MS3 346 aa11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 PDCD2LQ9BRP1 358 aa11.89□□□□□ -0.51
HLA-DQB1-207ENST00000460185 WDR11Q9BZH6 1224 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms