RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 NXPE1Q8N323 547 aa7.58□□□□□ -1.2
CCDC50-203ENST00000460064 NLGN2Q8NFZ4 835 aa7.58□□□□□ -1.2
CCDC50-203ENST00000460064 OR2W6PQ8NHA6 318 aa7.58□□□□□ -1.2
CCDC50-203ENST00000460064 USP7Q93009 1102 aa7.58□□□□□ -1.2
CCDC50-203ENST00000460064 CELF4Q9BZC1 486 aaKnown RBP7.58□□□□□ -1.2
CCDC50-203ENST00000460064 CABP5Q9NP86 173 aa7.58□□□□□ -1.2
CCDC50-203ENST00000460064 TMEM59LQ9UK28 342 aa7.58□□□□□ -1.2
CCDC50-203ENST00000460064 H7BY64 318 aa7.57□□□□□ -1.2
CCDC50-203ENST00000460064 EYA4O95677 639 aa7.57□□□□□ -1.2
CCDC50-203ENST00000460064 FERMT3Q86UX7 667 aa7.57□□□□□ -1.2
CCDC50-203ENST00000460064 VSIG10LQ86VR7 867 aa7.57□□□□□ -1.2
CCDC50-203ENST00000460064 DTX1Q86Y01 620 aa7.57□□□□□ -1.2
CCDC50-203ENST00000460064 KIF18BQ86Y91 864 aa7.57□□□□□ -1.2
CCDC50-203ENST00000460064 TEX2Q8IWB9 1127 aa7.57□□□□□ -1.2
CCDC50-203ENST00000460064 ANKS4BQ8N8V4 417 aa7.57□□□□□ -1.2
CCDC50-203ENST00000460064 FLCNQ8NFG4 579 aa7.57□□□□□ -1.2
CCDC50-203ENST00000460064 WDR66Q8TBY9 1149 aa7.57□□□□□ -1.2
CCDC50-203ENST00000460064 TTC1Q99614 292 aa7.57□□□□□ -1.2
CCDC50-203ENST00000460064 ORAI3Q9BRQ5 295 aa7.57□□□□□ -1.2
CCDC50-203ENST00000460064 ANGEL1Q9UNK9 670 aaKnown RBP7.57□□□□□ -1.2
CCDC50-203ENST00000460064 ZKSCAN5Q9Y2L8 839 aa7.57□□□□□ -1.2
CCDC50-203ENST00000460064 RWDD3Q9Y3V2 267 aa7.57□□□□□ -1.2
CCDC50-203ENST00000460064 C22orf46C9J442 243 aa7.56□□□□□ -1.2
CCDC50-203ENST00000460064 CBX4O00257 560 aa7.56□□□□□ -1.2
CCDC50-203ENST00000460064 TRAF5O00463 557 aa7.56□□□□□ -1.2
CCDC50-203ENST00000460064 WNT9AO14904 365 aa7.56□□□□□ -1.2
CCDC50-203ENST00000460064 FPR2P25090 351 aa7.56□□□□□ -1.2
CCDC50-203ENST00000460064 FAM50AQ14320 339 aaKnown RBP7.56□□□□□ -1.2
CCDC50-203ENST00000460064 CRY1Q16526 586 aa7.56□□□□□ -1.2
CCDC50-203ENST00000460064 SKOR2Q2VWA4 1001 aaPredicted RBP7.56□□□□□ -1.2
CCDC50-203ENST00000460064 HSF5Q4G112 596 aaPredicted RBP7.56□□□□□ -1.2
CCDC50-203ENST00000460064 TMEM177Q53S58 311 aa7.56□□□□□ -1.2
CCDC50-203ENST00000460064 OXR1Q8N573 874 aa7.56□□□□□ -1.2
CCDC50-203ENST00000460064 PI4K2BQ8TCG2 481 aa7.56□□□□□ -1.2
CCDC50-203ENST00000460064 STAG1Q8WVM7 1258 aa7.56□□□□□ -1.2
CCDC50-203ENST00000460064 ASIC4Q96FT7 647 aa7.56□□□□□ -1.2
CCDC50-203ENST00000460064 CCDC120Q96HB5 630 aa7.56□□□□□ -1.2
CCDC50-203ENST00000460064 CDIP1Q9H305 208 aa7.56□□□□□ -1.2
CCDC50-203ENST00000460064 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.56□□□□□ -1.2
CCDC50-203ENST00000460064 ADGRE2Q9UHX3 823 aa7.56□□□□□ -1.2
CCDC50-203ENST00000460064 A0A1W2PQJ5 194 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 ALG1L2C9J202 215 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 BRINP1O60477 761 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 GAS7O60861 476 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 F2P00734 622 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 PDGFRBP09619 1106 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 GNAT1P11488 350 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 RBM10P98175 930 aaKnown RBP7.55□□□□□ -1.2
CCDC50-203ENST00000460064 CHRNEQ04844 493 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 GALNT18Q6P9A2 607 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 SLC23A3Q6PIS1 610 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 OVCH1Q7RTY7 1134 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 NLRP10Q86W26 655 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 WFDC3Q8IUB2 231 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 LZTR1Q8N653 840 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 C2orf69Q8N8R5 385 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 PDZD8Q8NEN9 1154 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 PANK1Q8TE04 598 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 TYW1Q9NV66 732 aaKnown RBP7.55□□□□□ -1.2
CCDC50-203ENST00000460064 IMPACTQ9P2X3 320 aa7.55□□□□□ -1.2
CCDC50-203ENST00000460064 COA3Q9Y2R0 106 aaPredicted RBP7.55□□□□□ -1.2
CCDC50-203ENST00000460064 ZNF891A8MT65 544 aaPredicted RBP7.54□□□□□ -1.2
CCDC50-203ENST00000460064 COL6A2P12110 1019 aa7.54□□□□□ -1.2
CCDC50-203ENST00000460064 FUT4P22083 530 aa7.54□□□□□ -1.2
CCDC50-203ENST00000460064 CD97P48960 835 aa7.54□□□□□ -1.2
CCDC50-203ENST00000460064 GUCY2FP51841 1108 aa7.54□□□□□ -1.2
CCDC50-203ENST00000460064 SPIRE1Q08AE8 756 aa7.54□□□□□ -1.2
CCDC50-203ENST00000460064 OSTM1Q86WC4 334 aa7.54□□□□□ -1.2
CCDC50-203ENST00000460064 CISD2Q8N5K1 135 aaKnown RBP7.54□□□□□ -1.2
CCDC50-203ENST00000460064 CHST14Q8NCH0 376 aa7.54□□□□□ -1.2
CCDC50-203ENST00000460064 NUP43Q8NFH3 380 aa7.54□□□□□ -1.2
CCDC50-203ENST00000460064 PLEKHO2Q8TD55 490 aa7.54□□□□□ -1.2
CCDC50-203ENST00000460064 IFT22Q9H7X7 185 aa7.54□□□□□ -1.2
CCDC50-203ENST00000460064 METTL14Q9HCE5 456 aaKnown RBP7.54□□□□□ -1.2
CCDC50-203ENST00000460064 B4GALT6Q9UBX8 382 aa7.54□□□□□ -1.2
CCDC50-203ENST00000460064 CBLCQ9ULV8 474 aa7.54□□□□□ -1.2
CCDC50-203ENST00000460064 TAF6LQ9Y6J9 622 aa7.54□□□□□ -1.2
CCDC50-203ENST00000460064 PTPDC1A2A3K4 754 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 FITM1A5D6W6 292 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 NRDCO43847 1150 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 ZEB2O60315 1214 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 DGKIO75912 1065 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 PDE6AP16499 860 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 PRKCAP17252 672 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 KRT15P19012 456 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 SPINK2P20155 84 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 ITGB7P26010 798 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 PMLP29590 882 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 CORO7P57737 925 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 IL2P60568 153 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 LACTBP83111 547 aaPredicted RBP7.53□□□□□ -1.2
CCDC50-203ENST00000460064 MVKQ03426 396 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 STAT4Q14765 748 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 KIR3DS1Q14943 382 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 PLEKHG6Q3KR16 790 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 RNF219Q5W0B1 726 aaPredicted RBP7.53□□□□□ -1.2
CCDC50-203ENST00000460064 TP53INP2Q8IXH6 220 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 CEP89Q96ST8 783 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 MTA3Q9BTC8 594 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 EPB41L1Q9H4G0 881 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms