RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 MICU3Q86XE3 530 aa19.05■□□□□ 0.64
SHANK2-213ENST00000460048 IL31RAQ8NI17 732 aa19.05■□□□□ 0.64
SHANK2-213ENST00000460048 SEC63Q9UGP8 760 aaKnown RBP19.05■□□□□ 0.64
SHANK2-213ENST00000460048 DDX41Q9UJV9 622 aaKnown RBP19.05■□□□□ 0.64
SHANK2-213ENST00000460048 SNX14Q9Y5W7 946 aa19.05■□□□□ 0.64
SHANK2-213ENST00000460048 KPNA6O60684 536 aa19.04■□□□□ 0.64
SHANK2-213ENST00000460048 REC8O95072 547 aa19.04■□□□□ 0.64
SHANK2-213ENST00000460048 GH1P01241 217 aa19.04■□□□□ 0.64
SHANK2-213ENST00000460048 MYCLP12524 364 aaPredicted RBP19.04■□□□□ 0.64
SHANK2-213ENST00000460048 C9orf50Q5SZB4 431 aa19.04■□□□□ 0.64
SHANK2-213ENST00000460048 GPR153Q6NV75 609 aa19.04■□□□□ 0.64
SHANK2-213ENST00000460048 SYNE3Q6ZMZ3 975 aa19.04■□□□□ 0.64
SHANK2-213ENST00000460048 FCHSD1Q86WN1 690 aa19.04■□□□□ 0.64
SHANK2-213ENST00000460048 MTG1Q9BT17 334 aaPredicted RBP19.04■□□□□ 0.64
SHANK2-213ENST00000460048 PIK3CDO00329 1044 aa19.03■□□□□ 0.64
SHANK2-213ENST00000460048 MEIS2O14770 477 aa19.03■□□□□ 0.64
SHANK2-213ENST00000460048 EPB41L2O43491 1005 aaKnown RBP19.03■□□□□ 0.64
SHANK2-213ENST00000460048 EPHB4P54760 987 aa19.03■□□□□ 0.64
SHANK2-213ENST00000460048 FPGSQ05932 587 aa19.03■□□□□ 0.64
SHANK2-213ENST00000460048 MFSD5Q6N075 450 aa19.03■□□□□ 0.64
SHANK2-213ENST00000460048 EMID1Q96A84 441 aaPredicted RBP19.03■□□□□ 0.64
SHANK2-213ENST00000460048 RBM28Q9NW13 759 aaKnown RBP19.03■□□□□ 0.64
SHANK2-213ENST00000460048 CNTNAP5Q8WYK1 1306 aa19.02■□□□□ 0.64
SHANK2-213ENST00000460048 ZBTB43O43298 467 aa19.02■□□□□ 0.64
SHANK2-213ENST00000460048 B4GALT4O60513 344 aa19.02■□□□□ 0.64
SHANK2-213ENST00000460048 MMP3P08254 477 aa19.02■□□□□ 0.64
SHANK2-213ENST00000460048 CPA1P15085 419 aa19.02■□□□□ 0.64
SHANK2-213ENST00000460048 CCND2P30279 289 aa19.02■□□□□ 0.64
SHANK2-213ENST00000460048 FUT2Q10981 343 aa19.02■□□□□ 0.64
SHANK2-213ENST00000460048 KCNV1Q6PIU1 500 aa19.02■□□□□ 0.64
SHANK2-213ENST00000460048 CCDC82Q8N4S0 544 aa19.02■□□□□ 0.64
SHANK2-213ENST00000460048 AFG1LQ8WV93 481 aa19.02■□□□□ 0.64
SHANK2-213ENST00000460048 ALDH8A1Q9H2A2 487 aaPredicted RBP19.02■□□□□ 0.64
SHANK2-213ENST00000460048 MRVI1Q9Y6F6 885 aa19.02■□□□□ 0.64
SHANK2-213ENST00000460048 hCG_1642624A0A1W2PR95 340 aa19.01■□□□□ 0.63
SHANK2-213ENST00000460048 RCAN1P53805 252 aa19.01■□□□□ 0.63
SHANK2-213ENST00000460048 MRPS9P82933 396 aaKnown RBP19.01■□□□□ 0.63
SHANK2-213ENST00000460048 RTN1Q16799 776 aa19.01■□□□□ 0.63
SHANK2-213ENST00000460048 NBPF20Q3BBV1 942 aa19.01■□□□□ 0.63
SHANK2-213ENST00000460048 USP17L6PQ6QN14 398 aa19.01■□□□□ 0.63
SHANK2-213ENST00000460048 JAKMIP1Q96N16 626 aaKnown RBP19.01■□□□□ 0.63
SHANK2-213ENST00000460048 TRPV6Q9H1D0 765 aa19.01■□□□□ 0.63
SHANK2-213ENST00000460048 FAM217BQ9NTX9 383 aaPredicted RBP19.01■□□□□ 0.63
SHANK2-213ENST00000460048 KLF18A0A0U1RQI7 1052 aa19■□□□□ 0.63
SHANK2-213ENST00000460048 TGFB3P10600 412 aa19■□□□□ 0.63
SHANK2-213ENST00000460048 LAMC2Q13753 1193 aa19■□□□□ 0.63
SHANK2-213ENST00000460048 BLOC1S2Q6QNY1 142 aa19■□□□□ 0.63
SHANK2-213ENST00000460048 Q6ZUG5 572 aa19■□□□□ 0.63
SHANK2-213ENST00000460048 FBXL16Q8N461 479 aa19■□□□□ 0.63
SHANK2-213ENST00000460048 SMARCC2Q8TAQ2 1214 aa19■□□□□ 0.63
SHANK2-213ENST00000460048 CUL5Q93034 780 aa19■□□□□ 0.63
SHANK2-213ENST00000460048 ZFP91Q96JP5 570 aaPredicted RBP19■□□□□ 0.63
SHANK2-213ENST00000460048 PPP1R12CQ9BZL4 782 aa19■□□□□ 0.63
SHANK2-213ENST00000460048 TRIP12Q14669 1992 aaPredicted RBP19■□□□□ 0.63
SHANK2-213ENST00000460048 TANC1Q9C0D5 1861 aa18.99■□□□□ 0.63
SHANK2-213ENST00000460048 STAM2O75886 525 aa18.99■□□□□ 0.63
SHANK2-213ENST00000460048 CDC27P30260 824 aa18.99■□□□□ 0.63
SHANK2-213ENST00000460048 SP2Q02086 613 aa18.99■□□□□ 0.63
SHANK2-213ENST00000460048 PTPN11Q06124 597 aaPredicted RBP18.99■□□□□ 0.63
SHANK2-213ENST00000460048 MYSM1Q5VVJ2 828 aa18.99■□□□□ 0.63
SHANK2-213ENST00000460048 NFRKBQ6P4R8 1299 aa18.99■□□□□ 0.63
SHANK2-213ENST00000460048 DHX37Q8IY37 1157 aaKnown RBP18.99■□□□□ 0.63
SHANK2-213ENST00000460048 TMEM199Q8N511 208 aa18.99■□□□□ 0.63
SHANK2-213ENST00000460048 PPTC7Q8NI37 304 aa18.99■□□□□ 0.63
SHANK2-213ENST00000460048 GPKOWQ92917 476 aaPredicted RBP eCLIP18.99■□□□□ 0.63
SHANK2-213ENST00000460048 INPP4AQ96PE3 977 aaPredicted RBP18.99■□□□□ 0.63
SHANK2-213ENST00000460048 NOC4LQ9BVI4 516 aaKnown RBP18.99■□□□□ 0.63
SHANK2-213ENST00000460048 AGXT2Q9BYV1 514 aa18.99■□□□□ 0.63
SHANK2-213ENST00000460048 HIPK3Q9H422 1215 aa18.99■□□□□ 0.63
SHANK2-213ENST00000460048 PSTPIP2Q9H939 334 aa18.99■□□□□ 0.63
SHANK2-213ENST00000460048 TRMT13Q9NUP7 481 aaKnown RBP18.99■□□□□ 0.63
SHANK2-213ENST00000460048 SCN5AQ14524 2016 aa18.99■□□□□ 0.63
SHANK2-213ENST00000460048 LAMA2P24043 3122 aaKnown RBP18.99■□□□□ 0.63
SHANK2-213ENST00000460048 UMODL1Q5DID0 1318 aa18.99■□□□□ 0.63
SHANK2-213ENST00000460048 NID2Q14112 1375 aa18.98■□□□□ 0.63
SHANK2-213ENST00000460048 GOLGA8AA7E2F4 631 aa18.98■□□□□ 0.63
SHANK2-213ENST00000460048 GOLGA8BA8MQT2 603 aa18.98■□□□□ 0.63
SHANK2-213ENST00000460048 CENPBP07199 599 aaPredicted RBP18.98■□□□□ 0.63
SHANK2-213ENST00000460048 HOXD8P13378 290 aaPredicted RBP18.98■□□□□ 0.63
SHANK2-213ENST00000460048 CSF2RAP15509 400 aa18.98■□□□□ 0.63
SHANK2-213ENST00000460048 CASTP20810 708 aaKnown RBP18.98■□□□□ 0.63
SHANK2-213ENST00000460048 UBA1P22314 1058 aaKnown RBP18.98■□□□□ 0.63
SHANK2-213ENST00000460048 RPS6KB1P23443 525 aa18.98■□□□□ 0.63
SHANK2-213ENST00000460048 ICAM3P32942 547 aa18.98■□□□□ 0.63
SHANK2-213ENST00000460048 CYP2C18P33260 490 aa18.98■□□□□ 0.63
SHANK2-213ENST00000460048 APOBRQ0VD83 1088 aa18.98■□□□□ 0.63
SHANK2-213ENST00000460048 PPIGQ13427 754 aaKnown RBP eCLIP18.98■□□□□ 0.634e-7■■□□□ 13.6
SHANK2-213ENST00000460048 CELF3Q5SZQ8 465 aaKnown RBP18.98■□□□□ 0.63
SHANK2-213ENST00000460048 PCNX4Q63HM2 1172 aa18.98■□□□□ 0.63
SHANK2-213ENST00000460048 C16orf59Q7L2K0 433 aa18.98■□□□□ 0.63
SHANK2-213ENST00000460048 KAT2BQ92831 832 aa18.98■□□□□ 0.63
SHANK2-213ENST00000460048 USP26Q9BXU7 913 aa18.98■□□□□ 0.63
SHANK2-213ENST00000460048 GGPS1O95749 300 aa18.97■□□□□ 0.63
SHANK2-213ENST00000460048 SUPT20HL2P0C7V6 817 aa18.97■□□□□ 0.63
SHANK2-213ENST00000460048 PSMA5P28066 241 aa18.97■□□□□ 0.63
SHANK2-213ENST00000460048 SEMA3FQ13275 785 aa18.97■□□□□ 0.63
SHANK2-213ENST00000460048 DGKDQ16760 1214 aa18.97■□□□□ 0.63
SHANK2-213ENST00000460048 WWC2Q6AWC2 1192 aa18.97■□□□□ 0.63
SHANK2-213ENST00000460048 XRRA1Q6P2D8 792 aa18.97■□□□□ 0.63
SHANK2-213ENST00000460048 HEATR3Q7Z4Q2 680 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms