RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 ADCYAP1R1P41586 468 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 CLK2P49760 499 aaKnown RBP12.42□□□□□ -0.42
CCDC12-204ENST00000460035 TNFAIP2Q03169 654 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 AP3B2Q13367 1082 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 MCTP2Q6DN12 878 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 IQSEC1Q6DN90 963 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 GALNT17Q6IS24 598 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 TAPT1Q6NXT6 567 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 VSIG10LQ86VR7 867 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 BLIDQ8IZY5 108 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 DAGLBQ8NCG7 672 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 IL31RAQ8NI17 732 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 RASGRP4Q8TDF6 673 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 SNX21Q969T3 373 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 RTEL1Q9NZ71 1219 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 SMC3Q9UQE7 1217 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 RBM47A0AV96 593 aaKnown RBP12.41□□□□□ -0.42
CCDC12-204ENST00000460035 EN2P19622 333 aaPredicted RBP12.41□□□□□ -0.42
CCDC12-204ENST00000460035 ZNF76P36508 570 aa12.41□□□□□ -0.42
CCDC12-204ENST00000460035 GJA8P48165 433 aa12.41□□□□□ -0.42
CCDC12-204ENST00000460035 LHX8Q68G74 356 aa12.41□□□□□ -0.42
CCDC12-204ENST00000460035 XRRA1Q6P2D8 792 aa12.41□□□□□ -0.42
CCDC12-204ENST00000460035 HSCBQ8IWL3 235 aa12.41□□□□□ -0.42
CCDC12-204ENST00000460035 C8orf76Q96K31 380 aa12.41□□□□□ -0.42
CCDC12-204ENST00000460035 PHF20Q9BVI0 1012 aa12.41□□□□□ -0.42
CCDC12-204ENST00000460035 ANO3Q9BYT9 981 aa12.41□□□□□ -0.42
CCDC12-204ENST00000460035 WDR11Q9BZH6 1224 aa12.41□□□□□ -0.42
CCDC12-204ENST00000460035 BRMS1Q9HCU9 246 aa12.41□□□□□ -0.42
CCDC12-204ENST00000460035 KIF3AQ9Y496 699 aa12.41□□□□□ -0.42
CCDC12-204ENST00000460035 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.41□□□□□ -0.42
CCDC12-204ENST00000460035 SCN10AQ9Y5Y9 1956 aa12.4□□□□□ -0.42
CCDC12-204ENST00000460035 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.4□□□□□ -0.42
CCDC12-204ENST00000460035 K7ELQ4 463 aaPredicted RBP12.4□□□□□ -0.42
CCDC12-204ENST00000460035 DYNC1LI2O43237 492 aaPredicted RBP12.4□□□□□ -0.42
CCDC12-204ENST00000460035 TXNP10599 105 aaKnown RBP12.4□□□□□ -0.42
CCDC12-204ENST00000460035 SMPD1P17405 629 aa12.4□□□□□ -0.42
CCDC12-204ENST00000460035 GUCY1B3Q02153 619 aa12.4□□□□□ -0.42
CCDC12-204ENST00000460035 CUL4AQ13619 759 aa12.4□□□□□ -0.42
CCDC12-204ENST00000460035 TTLL4Q14679 1199 aa12.4□□□□□ -0.42
CCDC12-204ENST00000460035 NPY5RQ15761 445 aa12.4□□□□□ -0.42
CCDC12-204ENST00000460035 GNPTABQ3T906 1256 aa12.4□□□□□ -0.42
CCDC12-204ENST00000460035 PCNX4Q63HM2 1172 aa12.4□□□□□ -0.42
CCDC12-204ENST00000460035 KRT40Q6A162 431 aa12.4□□□□□ -0.42
CCDC12-204ENST00000460035 ARRDC4Q8NCT1 418 aa12.4□□□□□ -0.42
CCDC12-204ENST00000460035 SCFD2Q8WU76 684 aa12.4□□□□□ -0.42
CCDC12-204ENST00000460035 LENG1Q96BZ8 264 aaPredicted RBP12.4□□□□□ -0.42
CCDC12-204ENST00000460035 CRISPLD2Q9H0B8 497 aa12.4□□□□□ -0.42
CCDC12-204ENST00000460035 M0R2N6 131 aa12.39□□□□□ -0.43
CCDC12-204ENST00000460035 DUSP11O75319 330 aaKnown RBP12.39□□□□□ -0.43
CCDC12-204ENST00000460035 STAM2O75886 525 aa12.39□□□□□ -0.43
CCDC12-204ENST00000460035 PGK1P00558 417 aa12.39□□□□□ -0.43
CCDC12-204ENST00000460035 GJB2P29033 226 aa12.39□□□□□ -0.43
CCDC12-204ENST00000460035 KRT2P35908 639 aa12.39□□□□□ -0.43
CCDC12-204ENST00000460035 SREBF1P36956 1147 aa12.39□□□□□ -0.43
CCDC12-204ENST00000460035 MRPS9P82933 396 aaKnown RBP12.39□□□□□ -0.43
CCDC12-204ENST00000460035 SAFBQ15424 915 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCDC12-204ENST00000460035 TMEM63BQ5T3F8 832 aa12.39□□□□□ -0.43
CCDC12-204ENST00000460035 NLRX1Q86UT6 975 aa12.39□□□□□ -0.43
CCDC12-204ENST00000460035 AP5M1Q9H0R1 490 aa12.39□□□□□ -0.43
CCDC12-204ENST00000460035 SPC25Q9HBM1 224 aa12.39□□□□□ -0.43
CCDC12-204ENST00000460035 XPNPEP3Q9NQH7 507 aa12.39□□□□□ -0.43
CCDC12-204ENST00000460035 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
CCDC12-204ENST00000460035 MRVI1Q9Y6F6 885 aa12.39□□□□□ -0.43
CCDC12-204ENST00000460035 TRIP12Q14669 1992 aaPredicted RBP12.39□□□□□ -0.43
CCDC12-204ENST00000460035 CCDC194A0A1B0GVG4 234 aa12.38□□□□□ -0.43
CCDC12-204ENST00000460035 ADCY6O43306 1168 aa12.38□□□□□ -0.43
CCDC12-204ENST00000460035 HSP90AA1P07900 732 aaKnown RBP12.38□□□□□ -0.43
CCDC12-204ENST00000460035 PTGS1P23219 599 aa12.38□□□□□ -0.43
CCDC12-204ENST00000460035 ARHGAP4P98171 946 aa12.38□□□□□ -0.43
CCDC12-204ENST00000460035 GNL2Q13823 731 aaKnown RBP12.38□□□□□ -0.43
CCDC12-204ENST00000460035 LY6KQ17RY6 165 aa12.38□□□□□ -0.43
CCDC12-204ENST00000460035 DUSP28Q4G0W2 176 aa12.38□□□□□ -0.43
CCDC12-204ENST00000460035 GJC2Q5T442 439 aaPredicted RBP12.38□□□□□ -0.43
CCDC12-204ENST00000460035 KCNV1Q6PIU1 500 aa12.38□□□□□ -0.43
CCDC12-204ENST00000460035 KRT25Q7Z3Z0 450 aa12.38□□□□□ -0.43
CCDC12-204ENST00000460035 OXER1Q8TDS5 423 aa12.38□□□□□ -0.43
CCDC12-204ENST00000460035 CRYGNQ8WXF5 182 aa12.38□□□□□ -0.43
CCDC12-204ENST00000460035 COPS5Q92905 334 aa12.38□□□□□ -0.43
CCDC12-204ENST00000460035 INPP4AQ96PE3 977 aaPredicted RBP12.38□□□□□ -0.43
CCDC12-204ENST00000460035 OGDHLQ9ULD0 1010 aa12.38□□□□□ -0.43
CCDC12-204ENST00000460035 BTBD18B2RXH4 712 aa12.37□□□□□ -0.43
CCDC12-204ENST00000460035 NKRFO15226 690 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC12-204ENST00000460035 SORBS3O60504 671 aa12.37□□□□□ -0.43
CCDC12-204ENST00000460035 RGS20O76081 388 aa12.37□□□□□ -0.43
CCDC12-204ENST00000460035 ARIH2O95376 493 aa12.37□□□□□ -0.43
CCDC12-204ENST00000460035 MMP1P03956 469 aa12.37□□□□□ -0.43
CCDC12-204ENST00000460035 C6orf222P0C671 652 aaPredicted RBP12.37□□□□□ -0.43
CCDC12-204ENST00000460035 ICAM3P32942 547 aa12.37□□□□□ -0.43
CCDC12-204ENST00000460035 NKX3-2P78367 333 aa12.37□□□□□ -0.43
CCDC12-204ENST00000460035 NONOQ15233 471 aaKnown RBP eCLIP12.37□□□□□ -0.438e-10■■■■□ 19.9
CCDC12-204ENST00000460035 LRRC41Q15345 812 aa12.37□□□□□ -0.43
CCDC12-204ENST00000460035 GNASQ5JWF2 1037 aa12.37□□□□□ -0.43
CCDC12-204ENST00000460035 LARP1BQ659C4 914 aaKnown RBP12.37□□□□□ -0.43
CCDC12-204ENST00000460035 CCDC62Q6P9F0 684 aa12.37□□□□□ -0.43
CCDC12-204ENST00000460035 PIK3AP1Q6ZUJ8 805 aa12.37□□□□□ -0.43
CCDC12-204ENST00000460035 RNF180Q86T96 592 aa12.37□□□□□ -0.43
CCDC12-204ENST00000460035 TLK2Q86UE8 772 aa12.37□□□□□ -0.43
CCDC12-204ENST00000460035 DHX37Q8IY37 1157 aaKnown RBP12.37□□□□□ -0.43
CCDC12-204ENST00000460035 DIS3L2Q8IYB7 885 aaKnown RBP12.37□□□□□ -0.43
CCDC12-204ENST00000460035 OR6J1Q8NGC5 347 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms