RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 GTPBP6O43824 516 aaPredicted RBP14.41□□□□□ -0.1
GPNMB-204ENST00000459927 ARHGEF15O94989 841 aa14.41□□□□□ -0.1
GPNMB-204ENST00000459927 MMP3P08254 477 aa14.41□□□□□ -0.1
GPNMB-204ENST00000459927 AAK1Q2M2I8 961 aa14.41□□□□□ -0.1
GPNMB-204ENST00000459927 QRICH1Q2TAL8 776 aa14.41□□□□□ -0.1
GPNMB-204ENST00000459927 CWC27Q6UX04 472 aaKnown RBP14.41□□□□□ -0.1
GPNMB-204ENST00000459927 CHST3Q7LGC8 479 aa14.41□□□□□ -0.1
GPNMB-204ENST00000459927 FBXO11Q86XK2 927 aa14.41□□□□□ -0.1
GPNMB-204ENST00000459927 IL27Q8NEV9 243 aa14.41□□□□□ -0.1
GPNMB-204ENST00000459927 CAGE1Q8TC20 777 aa14.41□□□□□ -0.1
GPNMB-204ENST00000459927 AFAP1L1Q8TED9 768 aa14.41□□□□□ -0.1
GPNMB-204ENST00000459927 B4E1Z4 1266 aa14.4□□□□□ -0.1
GPNMB-204ENST00000459927 BAIAP3O94812 1187 aa14.4□□□□□ -0.1
GPNMB-204ENST00000459927 IGHDP01880 384 aa14.4□□□□□ -0.1
GPNMB-204ENST00000459927 NR3C2P08235 984 aa14.4□□□□□ -0.1
GPNMB-204ENST00000459927 PARP1P09874 1014 aaKnown RBP14.4□□□□□ -0.1
GPNMB-204ENST00000459927 SELPP16109 830 aa14.4□□□□□ -0.1
GPNMB-204ENST00000459927 AAMPQ13685 434 aa14.4□□□□□ -0.1
GPNMB-204ENST00000459927 LAMC2Q13753 1193 aa14.4□□□□□ -0.1
GPNMB-204ENST00000459927 SKIV2LQ15477 1246 aaKnown RBP14.4□□□□□ -0.1
GPNMB-204ENST00000459927 DGKDQ16760 1214 aa14.4□□□□□ -0.1
GPNMB-204ENST00000459927 ASPRV1Q53RT3 343 aa14.4□□□□□ -0.1
GPNMB-204ENST00000459927 ARHGEF16Q5VV41 709 aa14.4□□□□□ -0.1
GPNMB-204ENST00000459927 KRT40Q6A162 431 aa14.4□□□□□ -0.1
GPNMB-204ENST00000459927 CHD1LQ86WJ1 897 aa14.4□□□□□ -0.1
GPNMB-204ENST00000459927 ENAHQ8N8S7 591 aaPredicted RBP14.4□□□□□ -0.1
GPNMB-204ENST00000459927 ARNTL2Q8WYA1 636 aa14.4□□□□□ -0.1
GPNMB-204ENST00000459927 NECAB3Q96P71 396 aaPredicted RBP14.4□□□□□ -0.1
GPNMB-204ENST00000459927 HDAC6Q9UBN7 1215 aa14.4□□□□□ -0.1
GPNMB-204ENST00000459927 TLL1O43897 1013 aa14.39□□□□□ -0.11
GPNMB-204ENST00000459927 PPFIA4O75335 1185 aa14.39□□□□□ -0.11
GPNMB-204ENST00000459927 PARNO95453 639 aaKnown RBP14.39□□□□□ -0.11
GPNMB-204ENST00000459927 CKBP12277 381 aa14.39□□□□□ -0.11
GPNMB-204ENST00000459927 KCNQ1P51787 676 aa14.39□□□□□ -0.11
GPNMB-204ENST00000459927 CCDC155Q8N6L0 562 aa14.39□□□□□ -0.11
GPNMB-204ENST00000459927 DHX38Q92620 1227 aaKnown RBP14.39□□□□□ -0.11
GPNMB-204ENST00000459927 EMID1Q96A84 441 aaPredicted RBP14.39□□□□□ -0.11
GPNMB-204ENST00000459927 DSCC1Q9BVC3 393 aa14.39□□□□□ -0.11
GPNMB-204ENST00000459927 GTF2IRD1Q9UHL9 959 aa14.39□□□□□ -0.11
GPNMB-204ENST00000459927 COG5Q9UP83 839 aa14.39□□□□□ -0.11
GPNMB-204ENST00000459927 REV3LO60673 3130 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 HAS3O00219 553 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 LPXNO60711 386 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 NBNO60934 754 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 CFBP00751 764 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 CXCL10P02778 98 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 EIF2AK2P19525 551 aaKnown RBP14.38□□□□□ -0.11
GPNMB-204ENST00000459927 KCNJ6P48051 423 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 PSEN2P49810 448 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 NUCB1Q02818 461 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 RBL2Q08999 1139 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 GRB10Q13322 594 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 STOX1Q6ZVD7 989 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 LRRC8DQ7L1W4 858 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 DHX37Q8IY37 1157 aaKnown RBP14.38□□□□□ -0.11
GPNMB-204ENST00000459927 STAG2Q8N3U4 1231 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 C7orf31Q8N865 590 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 ALG1Q9BT22 464 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 AMNQ9BXJ7 453 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 KRT23Q9C075 422 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 PXMP2Q9NR77 195 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 MAP3K20Q9NYL2 800 aaKnown RBP14.38□□□□□ -0.11
GPNMB-204ENST00000459927 CTNNA3Q9UI47 895 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 MYH7BA7E2Y1 1941 aa14.38□□□□□ -0.11
GPNMB-204ENST00000459927 ABHD14A-ACY1A0A1B0GW23 586 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 HIP1O00291 1037 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 OPLAHO14841 1288 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 DHX16O60231 1041 aaKnown RBP14.37□□□□□ -0.11
GPNMB-204ENST00000459927 RGS20O76081 388 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 HSD17B4P51659 736 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 WDR5P61964 334 aaKnown RBP14.37□□□□□ -0.11
GPNMB-204ENST00000459927 ZNF200P98182 395 aaPredicted RBP14.37□□□□□ -0.11
GPNMB-204ENST00000459927 GHRHRQ02643 423 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 PTK7Q13308 1070 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 IMMTQ16891 758 aaKnown RBP14.37□□□□□ -0.11
GPNMB-204ENST00000459927 TCTN1Q2MV58 587 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 MYSM1Q5VVJ2 828 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 CNKSR3Q6P9H4 555 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 SPRED2Q7Z698 418 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 TMCO2Q7Z6W1 182 aaPredicted RBP14.37□□□□□ -0.11
GPNMB-204ENST00000459927 VSIG10LQ86VR7 867 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 MTMR8Q96EF0 704 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 ZBED2Q9BTP6 218 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 DIAPH3Q9NSV4 1193 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 LMCD1Q9NZU5 365 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 RAPGEFL1Q9UHV5 662 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 KIAA1217Q5T5P2 1943 aa14.37□□□□□ -0.11
GPNMB-204ENST00000459927 LCHNA4D1U4 455 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 KLRF2D3W0D1 207 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 MYCLP12524 364 aaPredicted RBP14.36□□□□□ -0.11
GPNMB-204ENST00000459927 SP2Q02086 613 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 IKBKEQ14164 716 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 MFSD10Q14728 455 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 KIAA0753Q2KHM9 967 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 TRIM71Q2Q1W2 868 aaKnown RBP14.36□□□□□ -0.11
GPNMB-204ENST00000459927 ZNF618Q5T7W0 954 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 KCNV1Q6PIU1 500 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 TRAF7Q6Q0C0 670 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 SAMD3Q8N6K7 520 aa14.36□□□□□ -0.11
GPNMB-204ENST00000459927 PPTC7Q8NI37 304 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms