RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 RPS6P62753 249 aaKnown RBP9.28□□□□□ -0.92
HPS4-207ENST00000459918 PTPROQ16827 1216 aa9.28□□□□□ -0.92
HPS4-207ENST00000459918 TTBK2Q6IQ55 1244 aa9.28□□□□□ -0.92
HPS4-207ENST00000459918 GDF6Q6KF10 455 aaPredicted RBP9.28□□□□□ -0.92
HPS4-207ENST00000459918 SEPT14Q6ZU15 432 aa9.28□□□□□ -0.92
HPS4-207ENST00000459918 AFG1LQ8WV93 481 aa9.28□□□□□ -0.92
HPS4-207ENST00000459918 KATNAL1Q9BW62 490 aa9.28□□□□□ -0.92
HPS4-207ENST00000459918 SUGCTQ9HAC7 445 aa9.28□□□□□ -0.92
HPS4-207ENST00000459918 CD320Q9NPF0 282 aa9.28□□□□□ -0.92
HPS4-207ENST00000459918 ZBTB47Q9UFB7 747 aaPredicted RBP9.28□□□□□ -0.92
HPS4-207ENST00000459918 CTNNA3Q9UI47 895 aa9.28□□□□□ -0.92
HPS4-207ENST00000459918 FAM50BQ9Y247 325 aa9.28□□□□□ -0.92
HPS4-207ENST00000459918 MYH7BA7E2Y1 1941 aa9.28□□□□□ -0.92
HPS4-207ENST00000459918 ABHD14A-ACY1A0A1B0GW23 586 aa9.27□□□□□ -0.93
HPS4-207ENST00000459918 RBM47A0AV96 593 aaKnown RBP9.27□□□□□ -0.93
HPS4-207ENST00000459918 LINC01553A4QN01 128 aa9.27□□□□□ -0.93
HPS4-207ENST00000459918 H3BQ06 376 aaPredicted RBP9.27□□□□□ -0.93
HPS4-207ENST00000459918 DHX16O60231 1041 aaKnown RBP9.27□□□□□ -0.93
HPS4-207ENST00000459918 MMP3P08254 477 aa9.27□□□□□ -0.93
HPS4-207ENST00000459918 TOP1P11387 765 aaKnown RBP9.27□□□□□ -0.93
HPS4-207ENST00000459918 MRE11P49959 708 aa9.27□□□□□ -0.93
HPS4-207ENST00000459918 DGKDQ16760 1214 aa9.27□□□□□ -0.93
HPS4-207ENST00000459918 PUS10Q3MIT2 529 aaKnown RBP9.27□□□□□ -0.93
HPS4-207ENST00000459918 LEXMQ3ZCV2 418 aa9.27□□□□□ -0.93
HPS4-207ENST00000459918 FAM178BQ8IXR5 827 aa9.27□□□□□ -0.93
HPS4-207ENST00000459918 MYOCDQ8IZQ8 938 aa9.27□□□□□ -0.93
HPS4-207ENST00000459918 DNERQ8NFT8 737 aa9.27□□□□□ -0.93
HPS4-207ENST00000459918 INCENPQ9NQS7 918 aa9.27□□□□□ -0.93
HPS4-207ENST00000459918 IL17RBQ9NRM6 502 aa9.27□□□□□ -0.93
HPS4-207ENST00000459918 MICAL3Q7RTP6 2002 aa9.27□□□□□ -0.93
HPS4-207ENST00000459918 BRWD1Q9NSI6 2320 aa9.26□□□□□ -0.93
HPS4-207ENST00000459918 DCXO43602 365 aa9.26□□□□□ -0.93
HPS4-207ENST00000459918 ARIH2O95376 493 aa9.26□□□□□ -0.93
HPS4-207ENST00000459918 ZNF286BP0CG31 522 aa9.26□□□□□ -0.93
HPS4-207ENST00000459918 CKBP12277 381 aa9.26□□□□□ -0.93
HPS4-207ENST00000459918 ERVK-21P61565 698 aa9.26□□□□□ -0.93
HPS4-207ENST00000459918 LY6KQ17RY6 165 aa9.26□□□□□ -0.93
HPS4-207ENST00000459918 TIGD5Q53EQ6 642 aa9.26□□□□□ -0.93
HPS4-207ENST00000459918 DIEXFQ68CQ4 756 aaKnown RBP9.26□□□□□ -0.93
HPS4-207ENST00000459918 YME1L1Q96TA2 773 aa9.26□□□□□ -0.93
HPS4-207ENST00000459918 C17orf80Q9BSJ5 609 aa9.26□□□□□ -0.93
HPS4-207ENST00000459918 INSL6Q9Y581 213 aa9.26□□□□□ -0.93
HPS4-207ENST00000459918 EMSYQ7Z589 1322 aa9.26□□□□□ -0.93
HPS4-207ENST00000459918 WDFY4Q6ZS81 3184 aa9.26□□□□□ -0.93
HPS4-207ENST00000459918 RALGAPA2Q2PPJ7 1873 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 SORBS3O60504 671 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 NBNO60934 754 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 UPP2O95045 317 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 CSPG5O95196 566 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 THPOP40225 353 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 PSEN2P49810 448 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 MFSD10Q14728 455 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 STXBP2Q15833 593 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 KIAA0753Q2KHM9 967 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 ARHGEF16Q5VV41 709 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 BANK1Q8NDB2 785 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.25□□□□□ -0.93
HPS4-207ENST00000459918 NSUN6Q8TEA1 469 aaKnown RBP9.25□□□□□ -0.93
HPS4-207ENST00000459918 CLEC4DQ8WXI8 215 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 TMEM47Q9BQJ4 181 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 CLDND1Q9NY35 253 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 HDAC6Q9UBN7 1215 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 GTF2IRD1Q9UHL9 959 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.25□□□□□ -0.93
HPS4-207ENST00000459918 MRVI1Q9Y6F6 885 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 TTC41PQ6P2S7 1318 aa9.25□□□□□ -0.93
HPS4-207ENST00000459918 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.24□□□□□ -0.93
HPS4-207ENST00000459918 GRXCR2A6NFK2 248 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 LGR5O75473 907 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 GOLGA8HP0CJ92 632 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 PDHBP11177 359 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 EIF2AK2P19525 551 aaKnown RBP9.24□□□□□ -0.93
HPS4-207ENST00000459918 EDNRBP24530 442 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 NHLH1Q02575 133 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 ARHGAP1Q07960 439 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 PTK7Q13308 1070 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 GPM6BQ13491 265 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 ZMYM1Q5SVZ6 1142 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 ZNF618Q5T7W0 954 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 ASTLQ6HA08 431 aaPredicted RBP9.24□□□□□ -0.93
HPS4-207ENST00000459918 BTNL9Q6UXG8 535 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.24□□□□□ -0.93
HPS4-207ENST00000459918 SESTD1Q86VW0 696 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 DHX38Q92620 1227 aaKnown RBP9.24□□□□□ -0.93
HPS4-207ENST00000459918 MRPL38Q96DV4 380 aaKnown RBP9.24□□□□□ -0.93
HPS4-207ENST00000459918 RMDN3Q96TC7 470 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 UPF3BQ9BZI7 483 aaKnown RBP9.24□□□□□ -0.93
HPS4-207ENST00000459918 WDR19Q8NEZ3 1342 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 PIEZO1Q92508 2521 aa9.24□□□□□ -0.93
HPS4-207ENST00000459918 RSPH10B2B2RC85 870 aa9.23□□□□□ -0.93
HPS4-207ENST00000459918 ORC4O43929 436 aa9.23□□□□□ -0.93
HPS4-207ENST00000459918 CXCL10P02778 98 aa9.23□□□□□ -0.93
HPS4-207ENST00000459918 RSPH10BP0C881 870 aa9.23□□□□□ -0.93
HPS4-207ENST00000459918 HAND2P61296 217 aa9.23□□□□□ -0.93
HPS4-207ENST00000459918 ZNF543Q08ER8 600 aa9.23□□□□□ -0.93
HPS4-207ENST00000459918 CLUL1Q15846 466 aa9.23□□□□□ -0.93
HPS4-207ENST00000459918 CDC37Q16543 378 aaPredicted RBP9.23□□□□□ -0.93
HPS4-207ENST00000459918 EPC2Q52LR7 807 aa9.23□□□□□ -0.93
HPS4-207ENST00000459918 MCF2L2Q86YR7 1114 aa9.23□□□□□ -0.93
HPS4-207ENST00000459918 FBXL18Q96ME1 805 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms