RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 RCAN1P53805 252 aa11.58□□□□□ -0.56
HDLBP-228ENST00000459788 CACNB1Q02641 598 aaPredicted RBP11.58□□□□□ -0.56
HDLBP-228ENST00000459788 KRT32Q14532 448 aa11.58□□□□□ -0.56
HDLBP-228ENST00000459788 RRP36Q96EU6 259 aaKnown RBP11.58□□□□□ -0.56
HDLBP-228ENST00000459788 PIGSQ96S52 555 aa11.58□□□□□ -0.56
HDLBP-228ENST00000459788 NOC4LQ9BVI4 516 aaKnown RBP11.58□□□□□ -0.56
HDLBP-228ENST00000459788 KATNAL1Q9BW62 490 aa11.58□□□□□ -0.56
HDLBP-228ENST00000459788 HIPK3Q9H422 1215 aa11.58□□□□□ -0.56
HDLBP-228ENST00000459788 ANO2Q9NQ90 1003 aa11.58□□□□□ -0.56
HDLBP-228ENST00000459788 DDX41Q9UJV9 622 aaKnown RBP11.58□□□□□ -0.56
HDLBP-228ENST00000459788 TAF6LQ9Y6J9 622 aa11.58□□□□□ -0.56
HDLBP-228ENST00000459788 DDX49Q9Y6V7 483 aaKnown RBP11.58□□□□□ -0.56
HDLBP-228ENST00000459788 CUL9Q8IWT3 2517 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 B4GALT4O60513 344 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 PPFIA4O75335 1185 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 PARNO95453 639 aaKnown RBP11.57□□□□□ -0.56
HDLBP-228ENST00000459788 MYL3P08590 195 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 CCND2P30279 289 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 EPHB4P54760 987 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 ARHGAP1Q07960 439 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 PGM5Q15124 567 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 DGKDQ16760 1214 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 SLC35G1Q2M3R5 365 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 GNPTABQ3T906 1256 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 TMEM240Q5SV17 173 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 TMEM63BQ5T3F8 832 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 CCDC155Q8N6L0 562 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 PPTC7Q8NI37 304 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 HERVK_113Q902F9 699 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 SENP2Q9HC62 589 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 SEC63Q9UGP8 760 aaKnown RBP11.57□□□□□ -0.56
HDLBP-228ENST00000459788 SCN5AQ14524 2016 aa11.57□□□□□ -0.56
HDLBP-228ENST00000459788 ARIH2O95376 493 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 MMP3P08254 477 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 CSF2RAP15509 400 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 EIF2AK2P19525 551 aaKnown RBP11.56□□□□□ -0.56
HDLBP-228ENST00000459788 ICAM3P32942 547 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 PSMC6P62333 389 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 BFSP2Q13515 415 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 NBPF20Q3BBV1 942 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 SYNE3Q6ZMZ3 975 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 NFXL1Q6ZNB6 911 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 SEPT14Q6ZU15 432 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 C16orf59Q7L2K0 433 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 CHST3Q7LGC8 479 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 HOMER1Q86YM7 354 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 CUL5Q93034 780 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.56□□□□□ -0.56
HDLBP-228ENST00000459788 RBM28Q9NW13 759 aaKnown RBP11.56□□□□□ -0.56
HDLBP-228ENST00000459788 SLC12A7Q9Y666 1083 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 MRVI1Q9Y6F6 885 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 TET1Q8NFU7 2136 aa11.56□□□□□ -0.56
HDLBP-228ENST00000459788 DOCK5Q9H7D0 1870 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 hCG_1984214I3L0E3 225 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 FGBP02675 491 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 CYP2C18P33260 490 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 RBL2Q08999 1139 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 LY6KQ17RY6 165 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 MYSM1Q5VVJ2 828 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 DHX32Q7L7V1 743 aaKnown RBP11.55□□□□□ -0.56
HDLBP-228ENST00000459788 DHX37Q8IY37 1157 aaKnown RBP11.55□□□□□ -0.56
HDLBP-228ENST00000459788 ZNF713Q8N859 430 aaPredicted RBP11.55□□□□□ -0.56
HDLBP-228ENST00000459788 FANCBQ8NB91 859 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 GIMAP8Q8ND71 665 aaPredicted RBP11.55□□□□□ -0.56
HDLBP-228ENST00000459788 CAGE1Q8TC20 777 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 AFG1LQ8WV93 481 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 COPS5Q92905 334 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 KCNB2Q92953 911 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 INPP4AQ96PE3 977 aaPredicted RBP11.55□□□□□ -0.56
HDLBP-228ENST00000459788 NEK1Q96PY6 1258 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 SENP7Q9BQF6 1050 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 PPP1R12CQ9BZL4 782 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 TRPV6Q9H1D0 765 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 SEMA6BQ9H3T3 888 aa11.55□□□□□ -0.56
HDLBP-228ENST00000459788 HAS3O00219 553 aa11.54□□□□□ -0.56
HDLBP-228ENST00000459788 RGS20O76081 388 aa11.54□□□□□ -0.56
HDLBP-228ENST00000459788 F2P00734 622 aa11.54□□□□□ -0.56
HDLBP-228ENST00000459788 EXOSC10Q01780 885 aaKnown RBP11.54□□□□□ -0.56
HDLBP-228ENST00000459788 NEDD9Q14511 834 aa11.54□□□□□ -0.56
HDLBP-228ENST00000459788 RAB30Q15771 203 aa11.54□□□□□ -0.56
HDLBP-228ENST00000459788 CELF3Q5SZQ8 465 aaKnown RBP11.54□□□□□ -0.56
HDLBP-228ENST00000459788 PCNX4Q63HM2 1172 aa11.54□□□□□ -0.56
HDLBP-228ENST00000459788 ZNF365Q70YC5 407 aa11.54□□□□□ -0.56
HDLBP-228ENST00000459788 Q7L0L9 218 aa11.54□□□□□ -0.56
HDLBP-228ENST00000459788 FBXL16Q8N461 479 aa11.54□□□□□ -0.56
HDLBP-228ENST00000459788 AFAP1L1Q8TED9 768 aa11.54□□□□□ -0.56
HDLBP-228ENST00000459788 CCDC136Q96JN2 1154 aa11.54□□□□□ -0.56
HDLBP-228ENST00000459788 CDHR1Q96JP9 859 aa11.54□□□□□ -0.56
HDLBP-228ENST00000459788 GUCD1Q96NT3 240 aa11.54□□□□□ -0.56
HDLBP-228ENST00000459788 GLT8D2Q9H1C3 349 aa11.54□□□□□ -0.56
HDLBP-228ENST00000459788 WNT8AQ9H1J5 351 aa11.54□□□□□ -0.56
HDLBP-228ENST00000459788 MAFGO15525 162 aa11.53□□□□□ -0.56
HDLBP-228ENST00000459788 FIBPO43427 364 aa11.53□□□□□ -0.56
HDLBP-228ENST00000459788 MYCLP12524 364 aaPredicted RBP11.53□□□□□ -0.56
HDLBP-228ENST00000459788 ACTN1P12814 892 aa11.53□□□□□ -0.56
HDLBP-228ENST00000459788 PTGS1P23219 599 aa11.53□□□□□ -0.56
HDLBP-228ENST00000459788 HOXA13P31271 388 aaPredicted RBP11.53□□□□□ -0.56
HDLBP-228ENST00000459788 ERICH6BQ5W0A0 696 aa11.53□□□□□ -0.56
HDLBP-228ENST00000459788 PPP1R18Q6NYC8 613 aa11.53□□□□□ -0.56
HDLBP-228ENST00000459788 APOA5Q6Q788 366 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms