RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 INTS13Q9NVM9 706 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 POLR3EQ9NVU0 708 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 GMEB1Q9Y692 573 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 SAR1BQ9Y6B6 198 aa12.53□□□□□ -0.4
DDX39B-214ENST00000458640 A0A0G2JLW4 131 aa12.52□□□□□ -0.4
DDX39B-214ENST00000458640 DNM1LO00429 736 aa12.52□□□□□ -0.4
DDX39B-214ENST00000458640 PRC1O43663 620 aa12.52□□□□□ -0.4
DDX39B-214ENST00000458640 PENKP01210 267 aaPredicted RBP12.52□□□□□ -0.4
DDX39B-214ENST00000458640 IL1R1P14778 569 aa12.52□□□□□ -0.4
DDX39B-214ENST00000458640 ADKP55263 362 aaKnown RBP12.52□□□□□ -0.4
DDX39B-214ENST00000458640 ZNF268Q14587 947 aaPredicted RBP12.52□□□□□ -0.4
DDX39B-214ENST00000458640 NR1I3Q14994 352 aa12.52□□□□□ -0.4
DDX39B-214ENST00000458640 STYK1Q6J9G0 422 aa12.52□□□□□ -0.4
DDX39B-214ENST00000458640 ZNF572Q7Z3I7 529 aaPredicted RBP12.52□□□□□ -0.4
DDX39B-214ENST00000458640 OSBPL7Q9BZF2 842 aa12.52□□□□□ -0.4
DDX39B-214ENST00000458640 CRNKL1Q9BZJ0 848 aaKnown RBP12.52□□□□□ -0.4
DDX39B-214ENST00000458640 TRIM4Q9C037 500 aa12.52□□□□□ -0.4
DDX39B-214ENST00000458640 KRT23Q9C075 422 aa12.52□□□□□ -0.4
DDX39B-214ENST00000458640 CD209Q9NNX6 404 aa12.52□□□□□ -0.4
DDX39B-214ENST00000458640 LAMB1P07942 1786 aa12.52□□□□□ -0.41
DDX39B-214ENST00000458640 GPR75-ASB3A0A0A6YYF3 556 aa12.52□□□□□ -0.41
DDX39B-214ENST00000458640 GMNCA6NCL1 334 aa12.52□□□□□ -0.41
DDX39B-214ENST00000458640 ZNF18P17022 549 aa12.52□□□□□ -0.41
DDX39B-214ENST00000458640 PRDX5P30044 214 aa12.52□□□□□ -0.41
DDX39B-214ENST00000458640 TTMPQ5BVD1 217 aa12.52□□□□□ -0.41
DDX39B-214ENST00000458640 ADGRA1Q86SQ6 560 aa12.52□□□□□ -0.41
DDX39B-214ENST00000458640 C2CD5Q86YS7 1000 aa12.52□□□□□ -0.41
DDX39B-214ENST00000458640 ENOX1Q8TC92 643 aaKnown RBP12.52□□□□□ -0.41
DDX39B-214ENST00000458640 ZNF274Q96GC6 653 aaPredicted RBP12.52□□□□□ -0.41
DDX39B-214ENST00000458640 HAUS4Q9H6D7 363 aa12.52□□□□□ -0.41
DDX39B-214ENST00000458640 CTNNAL1Q9UBT7 734 aa12.52□□□□□ -0.41
DDX39B-214ENST00000458640 ASB3Q9Y575 518 aa12.52□□□□□ -0.41
DDX39B-214ENST00000458640 A0A087WWV3 80 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 FAM237AA0A1B0GTK4 181 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 ANO9A1A5B4 782 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 PPIP5K2O43314 1243 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 MYL1P05976 194 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 LDHCP07864 332 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 NR1D1P20393 614 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 ALDH3A1P30838 453 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 STK3Q13188 491 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 COL9A3Q14050 684 aaPredicted RBP12.51□□□□□ -0.41
DDX39B-214ENST00000458640 IFI16Q16666 785 aaKnown RBP12.51□□□□□ -0.41
DDX39B-214ENST00000458640 DPP8Q6V1X1 898 aaPredicted RBP12.51□□□□□ -0.41
DDX39B-214ENST00000458640 RAD9BQ6WBX8 426 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 MFSD6Q6ZSS7 791 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 CACNA2D4Q7Z3S7 1137 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 CCDC125Q86Z20 511 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 TBC1D10CQ8IV04 446 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 SLF2Q8IX21 1173 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 CACNA2D3Q8IZS8 1091 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 LINC00301Q8NCQ3 95 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 PPP1R14BQ96C90 147 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 STAMBPL1Q96FJ0 436 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 TMEM87BQ96K49 555 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 EYA3Q99504 573 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 LRRC2Q9BYS8 371 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 WDR35Q9P2L0 1181 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 BAIAP2L1Q9UHR4 511 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 NUB1Q9Y5A7 615 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 ITIH6Q6UXX5 1313 aa12.51□□□□□ -0.41
DDX39B-214ENST00000458640 A0A1B0GVL5 298 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 BAG3O95817 575 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 PCP11498 1178 aaKnown RBP12.5□□□□□ -0.41
DDX39B-214ENST00000458640 HDLBPQ00341 1268 aaKnown RBP12.5□□□□□ -0.41
DDX39B-214ENST00000458640 AKNAD1Q5T1N1 836 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 SND1Q7KZF4 910 aaKnown RBP eCLIP12.5□□□□□ -0.41
DDX39B-214ENST00000458640 ARMCX6Q7L4S7 300 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 MAATS1Q7Z4T9 603 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 MREGQ8N565 214 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 SLC16A10Q8TF71 515 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 ATRIPQ8WXE1 791 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 CCT6BQ92526 530 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 RNPC3Q96LT9 517 aaKnown RBP12.5□□□□□ -0.41
DDX39B-214ENST00000458640 ZC3H12CQ9C0D7 883 aaKnown RBP12.5□□□□□ -0.41
DDX39B-214ENST00000458640 COA1Q9GZY4 146 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 MMADHCQ9H3L0 296 aaPredicted RBP12.5□□□□□ -0.41
DDX39B-214ENST00000458640 POLLQ9UGP5 575 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 A0A1B0GTH6 734 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 SOWAHDA6NJG2 315 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 PRKAB2O43741 272 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 SSBP05455 408 aaKnown RBP eCLIP12.5□□□□□ -0.415e-9■■■■■ 31.2
DDX39B-214ENST00000458640 YY1P25490 414 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 PSMC4P43686 418 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 CTCFP49711 727 aaPredicted RBP12.5□□□□□ -0.41
DDX39B-214ENST00000458640 CEBPZQ03701 1054 aaKnown RBP12.5□□□□□ -0.41
DDX39B-214ENST00000458640 PIK3R5Q8WYR1 880 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 ZNF570Q96NI8 536 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 AGAP3Q96P47 875 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 TRAPPC9Q96Q05 1148 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 CTAGE1Q96RT6 745 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 ZWILCHQ9H900 591 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 ATP8A2Q9NTI2 1148 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 SUN2Q9UH99 717 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 ANGEL1Q9UNK9 670 aaKnown RBP12.5□□□□□ -0.41
DDX39B-214ENST00000458640 PHF24Q9UPV7 400 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 DLEC1Q9Y238 1755 aa12.5□□□□□ -0.41
DDX39B-214ENST00000458640 E7ENQ6 273 aa12.49□□□□□ -0.41
DDX39B-214ENST00000458640 E7EVH7 732 aa12.49□□□□□ -0.41
DDX39B-214ENST00000458640 ECEL1O95672 775 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms