RNA–Protein interactions for RNA: ENST00000458578.6

UBE2L3-202, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-202ENST00000458578 GLIS3Q8NEA6 775 aa12.79□□□□□ -0.36
UBE2L3-202ENST00000458578 NOC3LQ8WTT2 800 aaKnown RBP12.79□□□□□ -0.36
UBE2L3-202ENST00000458578 CASKIN2Q8WXE0 1202 aa12.79□□□□□ -0.36
UBE2L3-202ENST00000458578 ERGIC2Q96RQ1 377 aa12.79□□□□□ -0.36
UBE2L3-202ENST00000458578 ANAPC4Q9UJX5 808 aa12.79□□□□□ -0.36
UBE2L3-202ENST00000458578 STX8Q9UNK0 236 aa12.79□□□□□ -0.36
UBE2L3-202ENST00000458578 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
UBE2L3-202ENST00000458578 TMOD1P28289 359 aa12.79□□□□□ -0.36
UBE2L3-202ENST00000458578 SLC51AQ86UW1 340 aa12.79□□□□□ -0.36
UBE2L3-202ENST00000458578 DYNLL2Q96FJ2 89 aa12.79□□□□□ -0.36
UBE2L3-202ENST00000458578 FAM84BQ96KN1 310 aaPredicted RBP12.79□□□□□ -0.36
UBE2L3-202ENST00000458578 MCM9Q9NXL9 1143 aa12.79□□□□□ -0.36
UBE2L3-202ENST00000458578 TBC1D7Q9P0N9 293 aa12.79□□□□□ -0.36
UBE2L3-202ENST00000458578 USP17L3A6NCW0 530 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 USP17L4A6NCW7 530 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 USP17L8P0C7I0 530 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 KIF5BP33176 963 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 MECOMQ03112 1051 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 PTGISQ16647 500 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 USP17L1Q7RTZ2 530 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 PNMA1Q8ND90 353 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 MYCBPAPQ8TBZ2 947 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 CCDC114Q96M63 670 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 PAPPAQ13219 1627 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 GOLGA6L10A6NI86 522 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 FNTAP49354 379 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 IQCKQ8N0W5 287 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 CAVIN3Q969G5 261 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 SCLT1Q96NL6 688 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 PACSIN1Q9BY11 444 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 SHANK3Q9BYB0 1731 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 TAF1P21675 1872 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 KCNQ2O43526 872 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 EPB41P11171 864 aaKnown RBP12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 MICALCLQ6ZW33 695 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 CCDC13Q8IYE1 715 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 GIMAP7Q8NHV1 300 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 MINPP1Q9UNW1 487 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 SIK3Q9Y2K2 1263 aa12.78□□□□□ -0.36
UBE2L3-202ENST00000458578 GOLGA6L7A0A1B0GV03 622 aa12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 RAD51CO43502 376 aa12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 KLRC1P26715 233 aa12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 MDH1P40925 334 aaKnown RBP12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 CDR1P51861 262 aa12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 POLR2FP61218 127 aaKnown RBP12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 RAPGEF1Q13905 1077 aa12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 CCDC40Q4G0X9 1142 aa12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 KDM7AQ6ZMT4 941 aa12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 PIK3R5Q8WYR1 880 aa12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 TBC1D5Q92609 795 aa12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 FAM212AQ96EL1 285 aa12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 ATP6V1G3Q96LB4 118 aa12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 AP1M1Q9BXS5 423 aa12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 DCP1AQ9NPI6 582 aaPredicted RBP12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 ADAMTS1Q9UHI8 967 aa12.77□□□□□ -0.36
UBE2L3-202ENST00000458578 E2F5Q15329 346 aa12.77□□□□□ -0.37
UBE2L3-202ENST00000458578 CNNM4Q6P4Q7 775 aa12.77□□□□□ -0.37
UBE2L3-202ENST00000458578 CCSER1Q9C0I3 900 aa12.77□□□□□ -0.37
UBE2L3-202ENST00000458578 DISP2A7MBM2 1401 aa12.77□□□□□ -0.37
UBE2L3-202ENST00000458578 FRMD3A2A2Y4 597 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 KCNK3O14649 394 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 OR52Z1P0C646 297 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 NAPAP54920 295 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 KIAA0753Q2KHM9 967 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 PARP10Q53GL7 1025 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 RCSD1Q6JBY9 416 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 CCDC121Q6ZUS5 278 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 SLC44A5Q8NCS7 719 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 UBLCP1Q8WVY7 318 aaPredicted RBP12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 CDK5RAP3Q96JB5 506 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 KLC4Q9NSK0 619 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 ITGB4P16144 1822 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 COL1A1P02452 1464 aaPredicted RBP12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 A0A1W2PQJ5 194 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 CCDC172P0C7W6 258 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 PRLRP16471 622 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 DDB1Q16531 1140 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 MAN2A1Q16706 1144 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 SPRED3Q2MJR0 410 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 ZSCAN29Q8IWY8 852 aaPredicted RBP12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 BRIP1Q9BX63 1249 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 MKNK2Q9HBH9 465 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 BIN2Q9UBW5 565 aaPredicted RBP12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 COL4A1P02462 1669 aa12.76□□□□□ -0.37
UBE2L3-202ENST00000458578 CYTH3O43739 400 aa12.75□□□□□ -0.37
UBE2L3-202ENST00000458578 PDHBP11177 359 aa12.75□□□□□ -0.37
UBE2L3-202ENST00000458578 CDK17Q00537 523 aa12.75□□□□□ -0.37
UBE2L3-202ENST00000458578 TXNRD3Q86VQ6 643 aa12.75□□□□□ -0.37
UBE2L3-202ENST00000458578 TIAM2Q8IVF5 1701 aa12.75□□□□□ -0.37
UBE2L3-202ENST00000458578 NELFCDQ8IXH7 590 aa12.75□□□□□ -0.37
UBE2L3-202ENST00000458578 GJA10Q969M2 543 aa12.75□□□□□ -0.37
UBE2L3-202ENST00000458578 NSUN4Q96CB9 384 aaKnown RBP12.75□□□□□ -0.37
UBE2L3-202ENST00000458578 CALML4Q96GE6 196 aa12.75□□□□□ -0.37
UBE2L3-202ENST00000458578 TRIM31Q9BZY9 425 aa12.75□□□□□ -0.37
UBE2L3-202ENST00000458578 FLT1P17948 1338 aa12.75□□□□□ -0.37
UBE2L3-202ENST00000458578 MYMKA6NI61 221 aa12.75□□□□□ -0.37
UBE2L3-202ENST00000458578 TRAF5O00463 557 aa12.75□□□□□ -0.37
UBE2L3-202ENST00000458578 CEP104O60308 925 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms