RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 CXCL17Q6UXB2 119 aa15.36■□□□□ 0.05
COMMD1-206ENST00000458337 SEPT14Q6ZU15 432 aa15.36■□□□□ 0.05
COMMD1-206ENST00000458337 IL31RAQ8NI17 732 aa15.36■□□□□ 0.05
COMMD1-206ENST00000458337 COPS5Q92905 334 aa15.36■□□□□ 0.05
COMMD1-206ENST00000458337 ALDH8A1Q9H2A2 487 aaPredicted RBP15.36■□□□□ 0.05
COMMD1-206ENST00000458337 GRIN2DO15399 1336 aa15.36■□□□□ 0.05
COMMD1-206ENST00000458337 A0A0U1RQG5 324 aaPredicted RBP15.35■□□□□ 0.05
COMMD1-206ENST00000458337 A0A1W2PPC1 479 aa15.35■□□□□ 0.05
COMMD1-206ENST00000458337 TRIM43BA6NCK2 446 aa15.35■□□□□ 0.05
COMMD1-206ENST00000458337 hCG_1984214I3L0E3 225 aa15.35■□□□□ 0.05
COMMD1-206ENST00000458337 KPNA6O60684 536 aa15.35■□□□□ 0.05
COMMD1-206ENST00000458337 STAM2O75886 525 aa15.35■□□□□ 0.05
COMMD1-206ENST00000458337 MYCLP12524 364 aaPredicted RBP15.35■□□□□ 0.05
COMMD1-206ENST00000458337 MAGEA10P43363 369 aaPredicted RBP15.35■□□□□ 0.05
COMMD1-206ENST00000458337 CPT1AP50416 773 aa15.35■□□□□ 0.05
COMMD1-206ENST00000458337 FAAP100Q0VG06 881 aa15.35■□□□□ 0.05
COMMD1-206ENST00000458337 NTRK3Q16288 839 aa15.35■□□□□ 0.05
COMMD1-206ENST00000458337 LY6KQ17RY6 165 aa15.35■□□□□ 0.05
COMMD1-206ENST00000458337 XRRA1Q6P2D8 792 aa15.35■□□□□ 0.05
COMMD1-206ENST00000458337 KCNV1Q6PIU1 500 aa15.35■□□□□ 0.05
COMMD1-206ENST00000458337 ZNF713Q8N859 430 aaPredicted RBP15.35■□□□□ 0.05
COMMD1-206ENST00000458337 OR6J1Q8NGC5 347 aa15.35■□□□□ 0.05
COMMD1-206ENST00000458337 CUL5Q93034 780 aa15.35■□□□□ 0.05
COMMD1-206ENST00000458337 EMID1Q96A84 441 aaPredicted RBP15.35■□□□□ 0.05
COMMD1-206ENST00000458337 TRIM43Q96BQ3 446 aaPredicted RBP15.35■□□□□ 0.05
COMMD1-206ENST00000458337 ZNF274Q96GC6 653 aaPredicted RBP15.35■□□□□ 0.05
COMMD1-206ENST00000458337 PDLIM7Q9NR12 457 aa15.35■□□□□ 0.05
COMMD1-206ENST00000458337 POLR3EQ9NVU0 708 aa15.35■□□□□ 0.05
COMMD1-206ENST00000458337 DCDC2CA8MYV0 355 aa15.34■□□□□ 0.05
COMMD1-206ENST00000458337 KIAA0355O15063 1070 aa15.34■□□□□ 0.05
COMMD1-206ENST00000458337 GH1P01241 217 aa15.34■□□□□ 0.05
COMMD1-206ENST00000458337 CCND2P30279 289 aa15.34■□□□□ 0.05
COMMD1-206ENST00000458337 MRPS9P82933 396 aaKnown RBP15.34■□□□□ 0.05
COMMD1-206ENST00000458337 PURAQ00577 322 aaKnown RBP15.34■□□□□ 0.05
COMMD1-206ENST00000458337 ARHGAP1Q07960 439 aa15.34■□□□□ 0.05
COMMD1-206ENST00000458337 BRDTQ58F21 947 aaPredicted RBP15.34■□□□□ 0.05
COMMD1-206ENST00000458337 WWC2Q6AWC2 1192 aa15.34■□□□□ 0.05
COMMD1-206ENST00000458337 TYW1BQ6NUM6 668 aa15.34■□□□□ 0.05
COMMD1-206ENST00000458337 SH3RF1Q7Z6J0 888 aa15.34■□□□□ 0.05
COMMD1-206ENST00000458337 SMARCC2Q8TAQ2 1214 aa15.34■□□□□ 0.05
COMMD1-206ENST00000458337 VTI1AQ96AJ9 217 aa15.34■□□□□ 0.05
COMMD1-206ENST00000458337 INPP4AQ96PE3 977 aaPredicted RBP15.34■□□□□ 0.05
COMMD1-206ENST00000458337 BARHL2Q9NY43 387 aa15.34■□□□□ 0.05
COMMD1-206ENST00000458337 MROH7Q68CQ1 1323 aa15.34■□□□□ 0.05
COMMD1-206ENST00000458337 STXBP3O00186 592 aa15.33■□□□□ 0.04
COMMD1-206ENST00000458337 PRPF3O43395 683 aaKnown RBP15.33■□□□□ 0.04
COMMD1-206ENST00000458337 SEC24BO95487 1268 aa15.33■□□□□ 0.04
COMMD1-206ENST00000458337 CD4P01730 458 aa15.33■□□□□ 0.04
COMMD1-206ENST00000458337 CLTBP09497 229 aa15.33■□□□□ 0.04
COMMD1-206ENST00000458337 IFNAR1P17181 557 aa15.33■□□□□ 0.04
COMMD1-206ENST00000458337 ICAM3P32942 547 aa15.33■□□□□ 0.04
COMMD1-206ENST00000458337 ITGA7Q13683 1181 aa15.33■□□□□ 0.04
COMMD1-206ENST00000458337 LAMC2Q13753 1193 aa15.33■□□□□ 0.04
COMMD1-206ENST00000458337 PFKFB3Q16875 520 aaPredicted RBP15.33■□□□□ 0.04
COMMD1-206ENST00000458337 PCNX4Q63HM2 1172 aa15.33■□□□□ 0.04
COMMD1-206ENST00000458337 PPP1R18Q6NYC8 613 aa15.33■□□□□ 0.04
COMMD1-206ENST00000458337 HEATR3Q7Z4Q2 680 aa15.33■□□□□ 0.04
COMMD1-206ENST00000458337 GPKOWQ92917 476 aaPredicted RBP eCLIP15.33■□□□□ 0.04
COMMD1-206ENST00000458337 UPF3BQ9BZI7 483 aaKnown RBP15.33■□□□□ 0.04
COMMD1-206ENST00000458337 RIC8AQ9NPQ8 531 aa15.33■□□□□ 0.04
COMMD1-206ENST00000458337 PRKAG2Q9UGJ0 569 aa15.33■□□□□ 0.04
COMMD1-206ENST00000458337 NAP1L2Q9ULW6 460 aaPredicted RBP15.33■□□□□ 0.04
COMMD1-206ENST00000458337 MRVI1Q9Y6F6 885 aa15.33■□□□□ 0.04
COMMD1-206ENST00000458337 MYH7BA7E2Y1 1941 aa15.33■□□□□ 0.04
COMMD1-206ENST00000458337 SPATA31C2B4DYI2 1134 aa15.32■□□□□ 0.04
COMMD1-206ENST00000458337 PQBP1O60828 265 aaKnown RBP15.32■□□□□ 0.04
COMMD1-206ENST00000458337 SP2Q02086 613 aa15.32■□□□□ 0.04
COMMD1-206ENST00000458337 PKN1Q16512 942 aa15.32■□□□□ 0.04
COMMD1-206ENST00000458337 MYSM1Q5VVJ2 828 aa15.32■□□□□ 0.04
COMMD1-206ENST00000458337 FAM126BQ8IXS8 530 aa15.32■□□□□ 0.04
COMMD1-206ENST00000458337 AFG1LQ8WV93 481 aa15.32■□□□□ 0.04
COMMD1-206ENST00000458337 MTG1Q9BT17 334 aaPredicted RBP15.32■□□□□ 0.04
COMMD1-206ENST00000458337 GLT8D2Q9H1C3 349 aa15.32■□□□□ 0.04
COMMD1-206ENST00000458337 PDRG1Q9NUG6 133 aa15.32■□□□□ 0.04
COMMD1-206ENST00000458337 TBX21Q9UL17 535 aa15.32■□□□□ 0.04
COMMD1-206ENST00000458337 SCN10AQ9Y5Y9 1956 aa15.32■□□□□ 0.04
COMMD1-206ENST00000458337 SMCO2A6NFE2 343 aa15.31■□□□□ 0.04
COMMD1-206ENST00000458337 HOXD8P13378 290 aaPredicted RBP15.31■□□□□ 0.04
COMMD1-206ENST00000458337 SCG2P13521 617 aa15.31■□□□□ 0.04
COMMD1-206ENST00000458337 ITGB8P26012 769 aa15.31■□□□□ 0.04
COMMD1-206ENST00000458337 NAPAP54920 295 aa15.31■□□□□ 0.04
COMMD1-206ENST00000458337 CELF3Q5SZQ8 465 aaKnown RBP15.31■□□□□ 0.04
COMMD1-206ENST00000458337 ZFP91Q96JP5 570 aaPredicted RBP15.31■□□□□ 0.04
COMMD1-206ENST00000458337 LBHD1Q9BQE6 289 aaPredicted RBP15.31■□□□□ 0.04
COMMD1-206ENST00000458337 RNF26Q9BY78 433 aaPredicted RBP15.31■□□□□ 0.04
COMMD1-206ENST00000458337 TMEM39AQ9NV64 488 aa15.31■□□□□ 0.04
COMMD1-206ENST00000458337 PCDHA6Q9UN73 950 aa15.31■□□□□ 0.04
COMMD1-206ENST00000458337 PCDHA8Q9Y5H6 950 aa15.31■□□□□ 0.04
COMMD1-206ENST00000458337 PPFIA4O75335 1185 aa15.3■□□□□ 0.04
COMMD1-206ENST00000458337 FOSP01100 380 aaPredicted RBP15.3■□□□□ 0.04
COMMD1-206ENST00000458337 MMP3P08254 477 aa15.3■□□□□ 0.04
COMMD1-206ENST00000458337 MYL3P08590 195 aa15.3■□□□□ 0.04
COMMD1-206ENST00000458337 CLK2P49760 499 aaKnown RBP15.3■□□□□ 0.04
COMMD1-206ENST00000458337 PSMC6P62333 389 aa15.3■□□□□ 0.04
COMMD1-206ENST00000458337 CCT2P78371 535 aaKnown RBP15.3■□□□□ 0.04
COMMD1-206ENST00000458337 MDM2Q00987 491 aaPredicted RBP15.3■□□□□ 0.04
COMMD1-206ENST00000458337 SEMA3FQ13275 785 aa15.3■□□□□ 0.04
COMMD1-206ENST00000458337 UBE2SQ16763 222 aa15.3■□□□□ 0.04
COMMD1-206ENST00000458337 DHX37Q8IY37 1157 aaKnown RBP15.3■□□□□ 0.04
COMMD1-206ENST00000458337 PPTC7Q8NI37 304 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms