RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 R3HCC1Q9Y3T6 440 aaKnown RBP18.33■□□□□ 0.53
CAPN13-203ENST00000458085 POTEB3A0JP26 581 aa18.33■□□□□ 0.52
CAPN13-203ENST00000458085 POTECB2RU33 542 aa18.33■□□□□ 0.52
CAPN13-203ENST00000458085 GCOM1H8Y6P7 765 aaPredicted RBP18.33■□□□□ 0.52
CAPN13-203ENST00000458085 MSH4O15457 936 aa18.33■□□□□ 0.52
CAPN13-203ENST00000458085 POLR2MP0CAP2 368 aa18.33■□□□□ 0.52
CAPN13-203ENST00000458085 SFPQP23246 707 aaKnown RBP eCLIP18.33■□□□□ 0.52
CAPN13-203ENST00000458085 AMPD3Q01432 767 aa18.33■□□□□ 0.52
CAPN13-203ENST00000458085 POTEBQ6S5H4 581 aa18.33■□□□□ 0.52
CAPN13-203ENST00000458085 SLC30A10Q6XR72 485 aa18.33■□□□□ 0.52
CAPN13-203ENST00000458085 KIAA0895Q8NCT3 520 aa18.33■□□□□ 0.52
CAPN13-203ENST00000458085 CCDC150Q8NCX0 1101 aa18.33■□□□□ 0.52
CAPN13-203ENST00000458085 EMILIN3Q9NT22 766 aa18.33■□□□□ 0.52
CAPN13-203ENST00000458085 GGA3Q9NZ52 723 aa18.33■□□□□ 0.52
CAPN13-203ENST00000458085 ADD3Q9UEY8 706 aaKnown RBP18.33■□□□□ 0.52
CAPN13-203ENST00000458085 DICER1Q9UPY3 1922 aaKnown RBP18.32■□□□□ 0.52
CAPN13-203ENST00000458085 POLR2AP24928 1970 aaKnown RBP18.32■□□□□ 0.52
CAPN13-203ENST00000458085 USP27XA6NNY8 438 aa18.32■□□□□ 0.52
CAPN13-203ENST00000458085 WDR46O15213 610 aaKnown RBP18.32■□□□□ 0.52
CAPN13-203ENST00000458085 MED24O75448 989 aa18.32■□□□□ 0.52
CAPN13-203ENST00000458085 CYP3A4P08684 503 aa18.32■□□□□ 0.52
CAPN13-203ENST00000458085 TBX2Q13207 712 aaPredicted RBP18.32■□□□□ 0.52
CAPN13-203ENST00000458085 HYIQ5T013 277 aa18.32■□□□□ 0.52
CAPN13-203ENST00000458085 IRF2BP1Q8IU81 584 aa18.32■□□□□ 0.52
CAPN13-203ENST00000458085 SLFN12Q8IYM2 578 aa18.32■□□□□ 0.52
CAPN13-203ENST00000458085 FHDC1Q9C0D6 1143 aaPredicted RBP18.32■□□□□ 0.52
CAPN13-203ENST00000458085 KIAA1024Q9UPX6 916 aa18.32■□□□□ 0.52
CAPN13-203ENST00000458085 MRPL11Q9Y3B7 192 aaKnown RBP18.32■□□□□ 0.52
CAPN13-203ENST00000458085 SBF1O95248 1867 aa18.32■□□□□ 0.52
CAPN13-203ENST00000458085 IGLV3-22A0A075B6J6 115 aa18.32■□□□□ 0.52
CAPN13-203ENST00000458085 E9PMD0 336 aa18.32■□□□□ 0.52
CAPN13-203ENST00000458085 KRT31Q15323 416 aa18.32■□□□□ 0.52
CAPN13-203ENST00000458085 DNTTIP2Q5QJE6 756 aaKnown RBP18.32■□□□□ 0.52
CAPN13-203ENST00000458085 SLF1Q9BQI6 1058 aa18.32■□□□□ 0.52
CAPN13-203ENST00000458085 WDR18Q9BV38 432 aa18.32■□□□□ 0.52
CAPN13-203ENST00000458085 DOCK1Q14185 1865 aa18.31■□□□□ 0.52
CAPN13-203ENST00000458085 VCAM1P19320 739 aa18.31■□□□□ 0.52
CAPN13-203ENST00000458085 LMNB1P20700 586 aa18.31■□□□□ 0.52
CAPN13-203ENST00000458085 SPP2Q13103 211 aa18.31■□□□□ 0.52
CAPN13-203ENST00000458085 LPAR1Q92633 364 aa18.31■□□□□ 0.52
CAPN13-203ENST00000458085 DDX12PQ92771 950 aa18.31■□□□□ 0.52
CAPN13-203ENST00000458085 WRNIP1Q96S55 665 aa18.31■□□□□ 0.52
CAPN13-203ENST00000458085 SLC39A2Q9NP94 309 aa18.31■□□□□ 0.52
CAPN13-203ENST00000458085 CCPG1Q9ULG6 757 aa18.31■□□□□ 0.52
CAPN13-203ENST00000458085 ICAM1P05362 532 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 ZNF76P36508 570 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 TRAF1Q13077 416 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 SPECC1LQ69YQ0 1117 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 NCAPH2Q6IBW4 605 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 TTI2Q6NXR4 508 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 DLK2Q6UY11 383 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 GPC2Q8N158 579 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 PRPF38AQ8NAV1 312 aaKnown RBP18.3■□□□□ 0.52
CAPN13-203ENST00000458085 TANGO6Q9C0B7 1094 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 SPON1Q9HCB6 807 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 ZNF112Q9UJU3 913 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 NFIBO00712 420 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 TBX3O15119 743 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 UNC13DQ70J99 1090 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 APOBEC3FQ8IUX4 373 aaKnown RBP18.3■□□□□ 0.52
CAPN13-203ENST00000458085 CPXCR1Q8N123 301 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 HOOK2Q96ED9 719 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 EEF2KMTQ96G04 330 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 ABCB11O95342 1321 aa18.3■□□□□ 0.52
CAPN13-203ENST00000458085 POTEFA5A3E0 1075 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 KCNJ18B7U540 433 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 PSMA7O14818 248 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 POTEIP0CG38 1075 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 PBX1P40424 430 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 SEMA3FQ13275 785 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 KCNJ12Q14500 433 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 DCAF15Q66K64 600 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 POTEGQ6S5H5 508 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 POTEEQ6S8J3 1075 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 CREBRFQ8IUR6 639 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 SCYL3Q8IZE3 742 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 DNAJC19Q96DA6 116 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 DUSP9Q99956 384 aaKnown RBP18.29■□□□□ 0.52
CAPN13-203ENST00000458085 RAVER2Q9HCJ3 691 aaKnown RBP18.29■□□□□ 0.52
CAPN13-203ENST00000458085 GINM1Q9NU53 330 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 TAB2Q9NYJ8 693 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 COL20A1Q9P218 1284 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 LIMA1Q9UHB6 759 aaKnown RBP18.29■□□□□ 0.52
CAPN13-203ENST00000458085 VAV3Q9UKW4 847 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 SSC5DA1L4H1 1573 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 KDM3AQ9Y4C1 1321 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 FLOT1O75955 427 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 SSBP05455 408 aaKnown RBP eCLIP18.29■□□□□ 0.52
CAPN13-203ENST00000458085 IDEP14735 1019 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 TCP11X2Q5H9J9 407 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 CATSPER3Q86XQ3 398 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 GLIS3Q8NEA6 775 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 CLEC4DQ8WXI8 215 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 CCDC47Q96A33 483 aaKnown RBP18.29■□□□□ 0.52
CAPN13-203ENST00000458085 WNK4Q96J92 1243 aa18.29■□□□□ 0.52
CAPN13-203ENST00000458085 RPAP3Q9H6T3 665 aaPredicted RBP18.29■□□□□ 0.52
CAPN13-203ENST00000458085 EML1O00423 815 aa18.28■□□□□ 0.52
CAPN13-203ENST00000458085 DDNO94850 711 aaPredicted RBP18.28■□□□□ 0.52
CAPN13-203ENST00000458085 SPATA31C1P0DKV0 1188 aa18.28■□□□□ 0.52
CAPN13-203ENST00000458085 PTPRAP18433 802 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms