RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TMEM67Q5HYA8 995 aa18.33■□□□□ 0.52
CHCHD3-204ENST00000457942 CYB5R4Q7L1T6 521 aa18.33■□□□□ 0.52
CHCHD3-204ENST00000457942 SPRED2Q7Z698 418 aa18.33■□□□□ 0.52
CHCHD3-204ENST00000457942 RGS22Q8NE09 1264 aa18.33■□□□□ 0.52
CHCHD3-204ENST00000457942 SEZ6LQ9BYH1 1024 aa18.33■□□□□ 0.52
CHCHD3-204ENST00000457942 JMJD4Q9H9V9 463 aa18.33■□□□□ 0.52
CHCHD3-204ENST00000457942 RBM47A0AV96 593 aaKnown RBP18.32■□□□□ 0.52
CHCHD3-204ENST00000457942 RBAK-RBAKDNI3L0D1 243 aa18.32■□□□□ 0.52
CHCHD3-204ENST00000457942 IFIT3O14879 490 aaKnown RBP18.32■□□□□ 0.52
CHCHD3-204ENST00000457942 CYP21A2P08686 494 aa18.32■□□□□ 0.52
CHCHD3-204ENST00000457942 SART3Q15020 963 aaKnown RBP18.32■□□□□ 0.52
CHCHD3-204ENST00000457942 RPUSD2Q8IZ73 545 aaKnown RBP18.32■□□□□ 0.52
CHCHD3-204ENST00000457942 STAG2Q8N3U4 1231 aa18.32■□□□□ 0.52
CHCHD3-204ENST00000457942 SYTL5Q8TDW5 730 aaPredicted RBP18.32■□□□□ 0.52
CHCHD3-204ENST00000457942 KHSRPQ92945 711 aaKnown RBP eCLIP18.32■□□□□ 0.529e-7■■■□□ 19.1
CHCHD3-204ENST00000457942 MTG1Q9BT17 334 aaPredicted RBP18.32■□□□□ 0.52
CHCHD3-204ENST00000457942 AMNQ9BXJ7 453 aa18.32■□□□□ 0.52
CHCHD3-204ENST00000457942 ALDH8A1Q9H2A2 487 aaPredicted RBP18.32■□□□□ 0.52
CHCHD3-204ENST00000457942 KLRF2D3W0D1 207 aa18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 CFBP00751 764 aa18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 CHMP4BP1P59074 171 aa18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 PURAQ00577 322 aaKnown RBP18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 SEC23AQ15436 765 aa18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 ARHGEF16Q5VV41 709 aa18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 SEPT14Q6ZU15 432 aa18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 HOMER1Q86YM7 354 aa18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 NCOA7Q8NI08 942 aa18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 NSUN6Q8TEA1 469 aaKnown RBP18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 TBC1D5Q92609 795 aa18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 COPS5Q92905 334 aa18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 TAAR1Q96RJ0 339 aa18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 RMDN3Q96TC7 470 aa18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 PRRC2BQ5JSZ5 2229 aaKnown RBP18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 KIAA1217Q5T5P2 1943 aa18.31■□□□□ 0.52
CHCHD3-204ENST00000457942 EIF2AK2P19525 551 aaKnown RBP18.3■□□□□ 0.52
CHCHD3-204ENST00000457942 WTAPQ15007 396 aa18.3■□□□□ 0.52
CHCHD3-204ENST00000457942 TMEM31Q5JXX7 168 aa18.3■□□□□ 0.52
CHCHD3-204ENST00000457942 MAF1Q9H063 256 aa18.3■□□□□ 0.52
CHCHD3-204ENST00000457942 COL20A1Q9P218 1284 aa18.3■□□□□ 0.52
CHCHD3-204ENST00000457942 TANC1Q9C0D5 1861 aa18.3■□□□□ 0.52
CHCHD3-204ENST00000457942 E7EWF7 191 aa18.29■□□□□ 0.52
CHCHD3-204ENST00000457942 SGSM2O43147 1006 aa18.29■□□□□ 0.52
CHCHD3-204ENST00000457942 STXBP2Q15833 593 aa18.29■□□□□ 0.52
CHCHD3-204ENST00000457942 CHST3Q7LGC8 479 aa18.29■□□□□ 0.52
CHCHD3-204ENST00000457942 MAD2L2Q9UI95 211 aa18.29■□□□□ 0.52
CHCHD3-204ENST00000457942 SCN10AQ9Y5Y9 1956 aa18.28■□□□□ 0.52
CHCHD3-204ENST00000457942 ZBTB5O15062 677 aa18.28■□□□□ 0.52
CHCHD3-204ENST00000457942 KPNA6O60684 536 aa18.28■□□□□ 0.52
CHCHD3-204ENST00000457942 ARIH2O95376 493 aa18.28■□□□□ 0.52
CHCHD3-204ENST00000457942 SUPT20HL2P0C7V6 817 aa18.28■□□□□ 0.52
CHCHD3-204ENST00000457942 GRM4Q14833 912 aa18.28■□□□□ 0.52
CHCHD3-204ENST00000457942 TMCO2Q7Z6W1 182 aaPredicted RBP18.28■□□□□ 0.52
CHCHD3-204ENST00000457942 IWS1Q96ST2 819 aa18.28■□□□□ 0.52
CHCHD3-204ENST00000457942 FTOQ9C0B1 505 aaKnown RBP eCLIP18.28■□□□□ 0.52
CHCHD3-204ENST00000457942 NOD1Q9Y239 953 aa18.28■□□□□ 0.52
CHCHD3-204ENST00000457942 PCDHA1Q9Y5I3 950 aa18.28■□□□□ 0.52
CHCHD3-204ENST00000457942 BAZ2BQ9UIF8 2168 aaKnown RBP18.28■□□□□ 0.52
CHCHD3-204ENST00000457942 TLL1O43897 1013 aa18.27■□□□□ 0.52
CHCHD3-204ENST00000457942 GH1P01241 217 aa18.27■□□□□ 0.52
CHCHD3-204ENST00000457942 TAP1Q03518 808 aa18.27■□□□□ 0.52
CHCHD3-204ENST00000457942 LY6KQ17RY6 165 aa18.27■□□□□ 0.52
CHCHD3-204ENST00000457942 NBPF20Q3BBV1 942 aa18.27■□□□□ 0.52
CHCHD3-204ENST00000457942 CATIPQ7Z7H3 387 aa18.27■□□□□ 0.52
CHCHD3-204ENST00000457942 GDPD5Q8WTR4 605 aa18.27■□□□□ 0.52
CHCHD3-204ENST00000457942 HLA-CQ95604 372 aa18.27■□□□□ 0.52
CHCHD3-204ENST00000457942 RBM8AQ9Y5S9 174 aaKnown RBP18.27■□□□□ 0.52
CHCHD3-204ENST00000457942 MRVI1Q9Y6F6 885 aa18.27■□□□□ 0.52
CHCHD3-204ENST00000457942 TAF6LQ9Y6J9 622 aa18.27■□□□□ 0.52
CHCHD3-204ENST00000457942 PALM3A6NDB9 673 aaPredicted RBP18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 A6NJR5 290 aa18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 PFKMP08237 780 aa18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 MYCLP12524 364 aaPredicted RBP18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 ACTN1P12814 892 aa18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 TRAF1Q13077 416 aa18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 GRB10Q13322 594 aa18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 STOX1Q6ZVD7 989 aa18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 AFG1LQ8WV93 481 aa18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 PIGSQ96S52 555 aa18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 SLC9A7Q96T83 725 aa18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 SENP2Q9HC62 589 aa18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 C11orf16Q9NQ32 467 aa18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 PXMP2Q9NR77 195 aa18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 MTUS1Q9ULD2 1270 aa18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 COG5Q9UP83 839 aa18.26■□□□□ 0.51
CHCHD3-204ENST00000457942 LCHNA4D1U4 455 aa18.25■□□□□ 0.51
CHCHD3-204ENST00000457942 PPP1R11O60927 126 aaPredicted RBP18.25■□□□□ 0.51
CHCHD3-204ENST00000457942 NR3C2P08235 984 aa18.25■□□□□ 0.51
CHCHD3-204ENST00000457942 MMP3P08254 477 aa18.25■□□□□ 0.51
CHCHD3-204ENST00000457942 HOXA13P31271 388 aaPredicted RBP18.25■□□□□ 0.51
CHCHD3-204ENST00000457942 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
CHCHD3-204ENST00000457942 HERC6Q8IVU3 1022 aa18.25■□□□□ 0.51
CHCHD3-204ENST00000457942 PIBF1Q8WXW3 757 aa18.25■□□□□ 0.51
CHCHD3-204ENST00000457942 MYH7BA7E2Y1 1941 aa18.25■□□□□ 0.51
CHCHD3-204ENST00000457942 PTPRSQ13332 1948 aa18.25■□□□□ 0.51
CHCHD3-204ENST00000457942 EIF3JO75822 258 aaKnown RBP18.24■□□□□ 0.51
CHCHD3-204ENST00000457942 HSD17B4P51659 736 aa18.24■□□□□ 0.51
CHCHD3-204ENST00000457942 ARHGAP1Q07960 439 aa18.24■□□□□ 0.51
CHCHD3-204ENST00000457942 NFRKBQ6P4R8 1299 aa18.24■□□□□ 0.51
CHCHD3-204ENST00000457942 CCDC62Q6P9F0 684 aa18.24■□□□□ 0.51
CHCHD3-204ENST00000457942 MAP4K1Q92918 833 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms