RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 TOMM22Q9NS69 142 aa16.89■□□□□ 0.29
UPF3AP2-201ENST00000457924 BDP1A6H8Y1 2624 aa16.88■□□□□ 0.29
UPF3AP2-201ENST00000457924 TRIP12Q14669 1992 aaPredicted RBP16.88■□□□□ 0.29
UPF3AP2-201ENST00000457924 EPOPA6NHQ4 379 aa16.88■□□□□ 0.29
UPF3AP2-201ENST00000457924 A6NJR5 290 aa16.88■□□□□ 0.29
UPF3AP2-201ENST00000457924 BAIAP3O94812 1187 aa16.88■□□□□ 0.29
UPF3AP2-201ENST00000457924 KCNJ6P48051 423 aa16.88■□□□□ 0.29
UPF3AP2-201ENST00000457924 TAP1Q03518 808 aa16.88■□□□□ 0.29
UPF3AP2-201ENST00000457924 KRT40Q6A162 431 aa16.88■□□□□ 0.29
UPF3AP2-201ENST00000457924 DNERQ8NFT8 737 aa16.88■□□□□ 0.29
UPF3AP2-201ENST00000457924 PPP1R13LQ8WUF5 828 aa16.88■□□□□ 0.29
UPF3AP2-201ENST00000457924 CLEC4DQ8WXI8 215 aa16.88■□□□□ 0.29
UPF3AP2-201ENST00000457924 HLA-CQ95604 372 aa16.88■□□□□ 0.29
UPF3AP2-201ENST00000457924 TMEM47Q9BQJ4 181 aa16.88■□□□□ 0.29
UPF3AP2-201ENST00000457924 TET1Q8NFU7 2136 aa16.87■□□□□ 0.29
UPF3AP2-201ENST00000457924 FGRP09769 529 aa16.87■□□□□ 0.29
UPF3AP2-201ENST00000457924 TXNP10599 105 aaKnown RBP16.87■□□□□ 0.29
UPF3AP2-201ENST00000457924 MX1P20591 662 aa16.87■□□□□ 0.29
UPF3AP2-201ENST00000457924 CHMP4BP1P59074 171 aa16.87■□□□□ 0.29
UPF3AP2-201ENST00000457924 RPS6P62753 249 aaKnown RBP16.87■□□□□ 0.29
UPF3AP2-201ENST00000457924 RRP12Q5JTH9 1297 aaKnown RBP16.87■□□□□ 0.29
UPF3AP2-201ENST00000457924 VPS53Q5VIR6 699 aa16.87■□□□□ 0.29
UPF3AP2-201ENST00000457924 CCDC155Q8N6L0 562 aa16.87■□□□□ 0.29
UPF3AP2-201ENST00000457924 OTUD7AQ8TE49 926 aaPredicted RBP16.87■□□□□ 0.29
UPF3AP2-201ENST00000457924 COPS5Q92905 334 aa16.87■□□□□ 0.29
UPF3AP2-201ENST00000457924 TLL1O43897 1013 aa16.86■□□□□ 0.29
UPF3AP2-201ENST00000457924 EDNRBP24530 442 aa16.86■□□□□ 0.29
UPF3AP2-201ENST00000457924 GRB10Q13322 594 aa16.86■□□□□ 0.29
UPF3AP2-201ENST00000457924 E2F4Q16254 413 aa16.86■□□□□ 0.29
UPF3AP2-201ENST00000457924 PTGISQ16647 500 aa16.86■□□□□ 0.29
UPF3AP2-201ENST00000457924 DIEXFQ68CQ4 756 aaKnown RBP16.86■□□□□ 0.29
UPF3AP2-201ENST00000457924 CAGE1Q8TC20 777 aa16.86■□□□□ 0.29
UPF3AP2-201ENST00000457924 TCP11L1Q9NUJ3 509 aa16.86■□□□□ 0.29
UPF3AP2-201ENST00000457924 HCN4Q9Y3Q4 1203 aa16.86■□□□□ 0.29
UPF3AP2-201ENST00000457924 ARHGEF15O94989 841 aa16.85■□□□□ 0.29
UPF3AP2-201ENST00000457924 PDHBP11177 359 aa16.85■□□□□ 0.29
UPF3AP2-201ENST00000457924 ALX1Q15699 326 aa16.85■□□□□ 0.29
UPF3AP2-201ENST00000457924 AFAP1L1Q8TED9 768 aa16.85■□□□□ 0.29
UPF3AP2-201ENST00000457924 EPHX3Q9H6B9 360 aa16.85■□□□□ 0.29
UPF3AP2-201ENST00000457924 HELLSQ9NRZ9 838 aa16.85■□□□□ 0.29
UPF3AP2-201ENST00000457924 WDR19Q8NEZ3 1342 aa16.85■□□□□ 0.29
UPF3AP2-201ENST00000457924 XIRP2A4UGR9 3374 aa16.85■□□□□ 0.29
UPF3AP2-201ENST00000457924 PTPRSQ13332 1948 aa16.84■□□□□ 0.29
UPF3AP2-201ENST00000457924 REV3LO60673 3130 aa16.84■□□□□ 0.29
UPF3AP2-201ENST00000457924 PTCD2Q8WV60 388 aaKnown RBP16.84■□□□□ 0.29
UPF3AP2-201ENST00000457924 EVI5LQ96CN4 794 aa16.84■□□□□ 0.29
UPF3AP2-201ENST00000457924 TTC14Q96N46 770 aa16.84■□□□□ 0.29
UPF3AP2-201ENST00000457924 LRFN3Q9BTN0 628 aa16.84■□□□□ 0.29
UPF3AP2-201ENST00000457924 ZBED2Q9BTP6 218 aa16.84■□□□□ 0.29
UPF3AP2-201ENST00000457924 ARIH1Q9Y4X5 557 aaPredicted RBP16.84■□□□□ 0.29
UPF3AP2-201ENST00000457924 COL4A4P53420 1690 aaPredicted RBP16.84■□□□□ 0.29
UPF3AP2-201ENST00000457924 ARIH2O95376 493 aa16.83■□□□□ 0.28
UPF3AP2-201ENST00000457924 PARNO95453 639 aaKnown RBP16.83■□□□□ 0.28
UPF3AP2-201ENST00000457924 WDR5P61964 334 aaKnown RBP16.83■□□□□ 0.28
UPF3AP2-201ENST00000457924 ZNF543Q08ER8 600 aa16.83■□□□□ 0.28
UPF3AP2-201ENST00000457924 USH1GQ495M9 461 aa16.83■□□□□ 0.28
UPF3AP2-201ENST00000457924 TMEM31Q5JXX7 168 aa16.83■□□□□ 0.28
UPF3AP2-201ENST00000457924 SESTD1Q86VW0 696 aa16.83■□□□□ 0.28
UPF3AP2-201ENST00000457924 OXER1Q8TDS5 423 aa16.83■□□□□ 0.28
UPF3AP2-201ENST00000457924 LMCD1Q9NZU5 365 aa16.83■□□□□ 0.28
UPF3AP2-201ENST00000457924 TRANK1O15050 2925 aa16.82■□□□□ 0.28
UPF3AP2-201ENST00000457924 LPXNO60711 386 aa16.82■□□□□ 0.28
UPF3AP2-201ENST00000457924 GH1P01241 217 aa16.82■□□□□ 0.28
UPF3AP2-201ENST00000457924 FGAP02671 866 aa16.82■□□□□ 0.28
UPF3AP2-201ENST00000457924 MMP3P08254 477 aa16.82■□□□□ 0.28
UPF3AP2-201ENST00000457924 SELPP16109 830 aa16.82■□□□□ 0.28
UPF3AP2-201ENST00000457924 GDF6Q6KF10 455 aaPredicted RBP16.82■□□□□ 0.28
UPF3AP2-201ENST00000457924 CNKSR3Q6P9H4 555 aa16.82■□□□□ 0.28
UPF3AP2-201ENST00000457924 LRRC8DQ7L1W4 858 aa16.82■□□□□ 0.28
UPF3AP2-201ENST00000457924 RGS22Q8NE09 1264 aa16.82■□□□□ 0.28
UPF3AP2-201ENST00000457924 AFG1LQ8WV93 481 aa16.82■□□□□ 0.28
UPF3AP2-201ENST00000457924 KIAA1217Q5T5P2 1943 aa16.81■□□□□ 0.28
UPF3AP2-201ENST00000457924 LCHNA4D1U4 455 aa16.81■□□□□ 0.28
UPF3AP2-201ENST00000457924 SNHG28P0DPA3 235 aa16.81■□□□□ 0.28
UPF3AP2-201ENST00000457924 CASTP20810 708 aaKnown RBP16.81■□□□□ 0.28
UPF3AP2-201ENST00000457924 MCMDC2Q4G0Z9 681 aa16.81■□□□□ 0.28
UPF3AP2-201ENST00000457924 GPATCH4Q5T3I0 446 aaKnown RBP16.81■□□□□ 0.28
UPF3AP2-201ENST00000457924 CCDC62Q6P9F0 684 aa16.81■□□□□ 0.28
UPF3AP2-201ENST00000457924 SEPT14Q6ZU15 432 aa16.81■□□□□ 0.28
UPF3AP2-201ENST00000457924 SPRED2Q7Z698 418 aa16.81■□□□□ 0.28
UPF3AP2-201ENST00000457924 MAF1Q9H063 256 aa16.81■□□□□ 0.28
UPF3AP2-201ENST00000457924 PCP11498 1178 aaKnown RBP16.8■□□□□ 0.28
UPF3AP2-201ENST00000457924 DEFB103AP81534 67 aa16.8■□□□□ 0.28
UPF3AP2-201ENST00000457924 ARHGAP1Q07960 439 aa16.8■□□□□ 0.28
UPF3AP2-201ENST00000457924 LY6KQ17RY6 165 aa16.8■□□□□ 0.28
UPF3AP2-201ENST00000457924 MFSD6Q6ZSS7 791 aa16.8■□□□□ 0.28
UPF3AP2-201ENST00000457924 CHST3Q7LGC8 479 aa16.8■□□□□ 0.28
UPF3AP2-201ENST00000457924 TMCO2Q7Z6W1 182 aaPredicted RBP16.8■□□□□ 0.28
UPF3AP2-201ENST00000457924 C7orf31Q8N865 590 aa16.8■□□□□ 0.28
UPF3AP2-201ENST00000457924 NSUN6Q8TEA1 469 aaKnown RBP16.8■□□□□ 0.28
UPF3AP2-201ENST00000457924 GDPD5Q8WTR4 605 aa16.8■□□□□ 0.28
UPF3AP2-201ENST00000457924 CTAGE1Q96RT6 745 aa16.8■□□□□ 0.28
UPF3AP2-201ENST00000457924 ZSWIM6Q9HCJ5 1215 aa16.8■□□□□ 0.28
UPF3AP2-201ENST00000457924 PCDHB15Q9Y5E8 787 aa16.8■□□□□ 0.28
UPF3AP2-201ENST00000457924 ZMYM6O95789 1325 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 SALL3Q9BXA9 1300 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 ABHD14A-ACY1A0A1B0GW23 586 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 CXCL10P02778 98 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 GOLGA8HP0CJ92 632 aa16.79■□□□□ 0.28
UPF3AP2-201ENST00000457924 HSPD1P10809 573 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms