RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 RASGRP4Q8TDF6 673 aa16.18■□□□□ 0.18
SMPD4-215ENST00000457039 CRYGNQ8WXF5 182 aa16.18■□□□□ 0.18
SMPD4-215ENST00000457039 OGDHLQ9ULD0 1010 aa16.18■□□□□ 0.18
SMPD4-215ENST00000457039 FAM184BQ9ULE4 1060 aa16.18■□□□□ 0.18
SMPD4-215ENST00000457039 GNEQ9Y223 722 aaKnown RBP16.18■□□□□ 0.18
SMPD4-215ENST00000457039 KIAA0100Q14667 2235 aaKnown RBP16.18■□□□□ 0.18
SMPD4-215ENST00000457039 FRMPD3Q5JV73 1810 aa16.17■□□□□ 0.18
SMPD4-215ENST00000457039 K7ELQ4 463 aaPredicted RBP16.17■□□□□ 0.18
SMPD4-215ENST00000457039 STAM2O75886 525 aa16.17■□□□□ 0.18
SMPD4-215ENST00000457039 MYCLP12524 364 aaPredicted RBP16.17■□□□□ 0.18
SMPD4-215ENST00000457039 SREBF1P36956 1147 aa16.17■□□□□ 0.18
SMPD4-215ENST00000457039 TMEM63BQ5T3F8 832 aa16.17■□□□□ 0.18
SMPD4-215ENST00000457039 IQSEC1Q6DN90 963 aa16.17■□□□□ 0.18
SMPD4-215ENST00000457039 BLIDQ8IZY5 108 aa16.17■□□□□ 0.18
SMPD4-215ENST00000457039 LENG1Q96BZ8 264 aaPredicted RBP16.17■□□□□ 0.18
SMPD4-215ENST00000457039 DUSP11O75319 330 aaKnown RBP16.16■□□□□ 0.18
SMPD4-215ENST00000457039 ARIH2O95376 493 aa16.16■□□□□ 0.18
SMPD4-215ENST00000457039 SMPD1P17405 629 aa16.16■□□□□ 0.18
SMPD4-215ENST00000457039 CAPN2P17655 700 aa16.16■□□□□ 0.18
SMPD4-215ENST00000457039 SOX10P56693 466 aa16.16■□□□□ 0.18
SMPD4-215ENST00000457039 ANO1Q5XXA6 986 aa16.16■□□□□ 0.18
SMPD4-215ENST00000457039 KRT40Q6A162 431 aa16.16■□□□□ 0.18
SMPD4-215ENST00000457039 CCDC62Q6P9F0 684 aa16.16■□□□□ 0.18
SMPD4-215ENST00000457039 SCFD2Q8WU76 684 aa16.16■□□□□ 0.18
SMPD4-215ENST00000457039 ZFP91Q96JP5 570 aaPredicted RBP16.16■□□□□ 0.18
SMPD4-215ENST00000457039 INPP4AQ96PE3 977 aaPredicted RBP16.16■□□□□ 0.18
SMPD4-215ENST00000457039 EHMT1Q9H9B1 1298 aa16.16■□□□□ 0.18
SMPD4-215ENST00000457039 EDIL3O43854 480 aa16.15■□□□□ 0.18
SMPD4-215ENST00000457039 ADAMTS4O75173 837 aa16.15■□□□□ 0.18
SMPD4-215ENST00000457039 MMP1P03956 469 aa16.15■□□□□ 0.18
SMPD4-215ENST00000457039 CYP3A4P08684 503 aa16.15■□□□□ 0.18
SMPD4-215ENST00000457039 RARBP10826 455 aa16.15■□□□□ 0.18
SMPD4-215ENST00000457039 EN2P19622 333 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-215ENST00000457039 MNX1P50219 401 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-215ENST00000457039 NKX3-2P78367 333 aa16.15■□□□□ 0.18
SMPD4-215ENST00000457039 TNFAIP2Q03169 654 aa16.15■□□□□ 0.18
SMPD4-215ENST00000457039 DUSP28Q4G0W2 176 aa16.15■□□□□ 0.18
SMPD4-215ENST00000457039 SEPT14Q6ZU15 432 aa16.15■□□□□ 0.18
SMPD4-215ENST00000457039 OXER1Q8TDS5 423 aa16.15■□□□□ 0.18
SMPD4-215ENST00000457039 TNFRSF25Q93038 417 aa16.15■□□□□ 0.18
SMPD4-215ENST00000457039 WDR11Q9BZH6 1224 aa16.15■□□□□ 0.18
SMPD4-215ENST00000457039 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-215ENST00000457039 UBIAD1Q9Y5Z9 338 aa16.15■□□□□ 0.18
SMPD4-215ENST00000457039 KIAA1217Q5T5P2 1943 aa16.15■□□□□ 0.18
SMPD4-215ENST00000457039 ITGB5P18084 799 aa16.14■□□□□ 0.17
SMPD4-215ENST00000457039 PTGS1P23219 599 aa16.14■□□□□ 0.17
SMPD4-215ENST00000457039 ICAM3P32942 547 aa16.14■□□□□ 0.17
SMPD4-215ENST00000457039 ARHGAP4P98171 946 aa16.14■□□□□ 0.17
SMPD4-215ENST00000457039 SEMA3FQ13275 785 aa16.14■□□□□ 0.17
SMPD4-215ENST00000457039 TTLL4Q14679 1199 aa16.14■□□□□ 0.17
SMPD4-215ENST00000457039 FAM184AQ8NB25 1140 aa16.14■□□□□ 0.17
SMPD4-215ENST00000457039 FBXO18Q8NFZ0 1043 aa16.14■□□□□ 0.17
SMPD4-215ENST00000457039 C8orf76Q96K31 380 aa16.14■□□□□ 0.17
SMPD4-215ENST00000457039 UPF3AQ9H1J1 476 aaKnown RBP16.14■□□□□ 0.17
SMPD4-215ENST00000457039 XPNPEP3Q9NQH7 507 aa16.14■□□□□ 0.17
SMPD4-215ENST00000457039 RTEL1Q9NZ71 1219 aa16.14■□□□□ 0.17
SMPD4-215ENST00000457039 DDX41Q9UJV9 622 aaKnown RBP16.14■□□□□ 0.17
SMPD4-215ENST00000457039 Q9Y3F1 56 aa16.14■□□□□ 0.17
SMPD4-215ENST00000457039 SYNRGQ9UMZ2 1314 aa16.14■□□□□ 0.17
SMPD4-215ENST00000457039 SPATA31C2B4DYI2 1134 aa16.13■□□□□ 0.17
SMPD4-215ENST00000457039 NKRFO15226 690 aaKnown RBP eCLIP16.13■□□□□ 0.17
SMPD4-215ENST00000457039 CTAGE5O15320 804 aa16.13■□□□□ 0.17
SMPD4-215ENST00000457039 TFRCP02786 760 aaKnown RBP16.13■□□□□ 0.17
SMPD4-215ENST00000457039 TXNP10599 105 aaKnown RBP16.13■□□□□ 0.17
SMPD4-215ENST00000457039 GJB2P29033 226 aa16.13■□□□□ 0.17
SMPD4-215ENST00000457039 KRT2P35908 639 aa16.13■□□□□ 0.17
SMPD4-215ENST00000457039 FOSBP53539 338 aa16.13■□□□□ 0.17
SMPD4-215ENST00000457039 GJA9P57773 515 aa16.13■□□□□ 0.17
SMPD4-215ENST00000457039 TRIM29Q14134 588 aa16.13■□□□□ 0.17
SMPD4-215ENST00000457039 GJC2Q5T442 439 aaPredicted RBP16.13■□□□□ 0.17
SMPD4-215ENST00000457039 UBE2Q1Q7Z7E8 422 aa16.13■□□□□ 0.17
SMPD4-215ENST00000457039 ANKLE1Q8NAG6 615 aa16.13■□□□□ 0.17
SMPD4-215ENST00000457039 INTS4Q96HW7 963 aaKnown RBP16.13■□□□□ 0.17
SMPD4-215ENST00000457039 JADE2Q9NQC1 790 aa16.13■□□□□ 0.17
SMPD4-215ENST00000457039 MRVI1Q9Y6F6 885 aa16.13■□□□□ 0.17
SMPD4-215ENST00000457039 PGK1P00558 417 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 TGFB3P10600 412 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 CST5P28325 142 aaPredicted RBP16.12■□□□□ 0.17
SMPD4-215ENST00000457039 CIITAP33076 1130 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 NR5A1Q13285 461 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 LRRC41Q15345 812 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 LY6KQ17RY6 165 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 GNPTABQ3T906 1256 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 EARS2Q5JPH6 523 aaKnown RBP16.12■□□□□ 0.17
SMPD4-215ENST00000457039 CCSAPQ6IQ19 270 aaPredicted RBP16.12■□□□□ 0.17
SMPD4-215ENST00000457039 KCNV1Q6PIU1 500 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 KRT25Q7Z3Z0 450 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 TLK2Q86UE8 772 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 HSCBQ8IWL3 235 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 DIS3L2Q8IYB7 885 aaKnown RBP16.12■□□□□ 0.17
SMPD4-215ENST00000457039 KLHDC9Q8NEP7 349 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 CYP2W1Q8TAV3 490 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 COPS5Q92905 334 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 GPRASP2Q96D09 838 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 MXRA8Q9BRK3 442 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 SMC3Q9UQE7 1217 aa16.12■□□□□ 0.17
SMPD4-215ENST00000457039 MYH7BA7E2Y1 1941 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 MKI67P46013 3256 aaKnown RBP16.11■□□□□ 0.17
SMPD4-215ENST00000457039 IGLV3-22A0A075B6J6 115 aa16.11■□□□□ 0.17
SMPD4-215ENST00000457039 MYADML2A6NDP7 307 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms