RNA–Protein interactions for RNA: ENST00000456991.5

TMEM56-203, Transcript of transmembrane protein 56, humanhuman

TSL 3

Gene TMEM56, Length 992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-203ENST00000456991 COL20A1Q9P218 1284 aa25.06■■□□□ 1.6
TMEM56-203ENST00000456991 COG5Q9UP83 839 aa25.06■■□□□ 1.6
TMEM56-203ENST00000456991 SCN10AQ9Y5Y9 1956 aa25.05■■□□□ 1.6
TMEM56-203ENST00000456991 EIF3JO75822 258 aaKnown RBP25.05■■□□□ 1.6
TMEM56-203ENST00000456991 ARHGEF16Q5VV41 709 aa25.05■■□□□ 1.6
TMEM56-203ENST00000456991 FBXO11Q86XK2 927 aa25.05■■□□□ 1.6
TMEM56-203ENST00000456991 NECAB3Q96P71 396 aaPredicted RBP25.05■■□□□ 1.6
TMEM56-203ENST00000456991 CTAGE1Q96RT6 745 aa25.05■■□□□ 1.6
TMEM56-203ENST00000456991 DDX41Q9UJV9 622 aaKnown RBP25.05■■□□□ 1.6
TMEM56-203ENST00000456991 REV3LO60673 3130 aa25.04■■□□□ 1.6
TMEM56-203ENST00000456991 DHX16O60231 1041 aaKnown RBP25.04■■□□□ 1.6
TMEM56-203ENST00000456991 ARHGEF15O94989 841 aa25.04■■□□□ 1.6
TMEM56-203ENST00000456991 PARP1P09874 1014 aaKnown RBP25.04■■□□□ 1.6
TMEM56-203ENST00000456991 QRICH1Q2TAL8 776 aa25.04■■□□□ 1.6
TMEM56-203ENST00000456991 LRRC8DQ7L1W4 858 aa25.04■■□□□ 1.6
TMEM56-203ENST00000456991 C7orf31Q8N865 590 aa25.04■■□□□ 1.6
TMEM56-203ENST00000456991 EMID1Q96A84 441 aaPredicted RBP25.04■■□□□ 1.6
TMEM56-203ENST00000456991 VAT1LQ9HCJ6 419 aa25.04■■□□□ 1.6
TMEM56-203ENST00000456991 B4E1Z4 1266 aa25.03■■□□□ 1.6
TMEM56-203ENST00000456991 KCNQ1P51787 676 aa25.03■■□□□ 1.6
TMEM56-203ENST00000456991 LAMC2Q13753 1193 aa25.03■■□□□ 1.6
TMEM56-203ENST00000456991 GPNMBQ14956 572 aa25.03■■□□□ 1.6
TMEM56-203ENST00000456991 KRT40Q6A162 431 aa25.03■■□□□ 1.6
TMEM56-203ENST00000456991 CWC27Q6UX04 472 aaKnown RBP25.03■■□□□ 1.6
TMEM56-203ENST00000456991 ENAHQ8N8S7 591 aaPredicted RBP25.03■■□□□ 1.6
TMEM56-203ENST00000456991 ZBED2Q9BTP6 218 aa25.03■■□□□ 1.6
TMEM56-203ENST00000456991 KATNAL1Q9BW62 490 aa25.03■■□□□ 1.6
TMEM56-203ENST00000456991 ZSWIM5Q9P217 1185 aa25.03■■□□□ 1.6
TMEM56-203ENST00000456991 GTF2IRD1Q9UHL9 959 aa25.03■■□□□ 1.6
TMEM56-203ENST00000456991 NCOR1O75376 2440 aa25.02■■□□□ 1.6
TMEM56-203ENST00000456991 EIF2AK2P19525 551 aaKnown RBP25.02■■□□□ 1.6
TMEM56-203ENST00000456991 WDR5P61964 334 aaKnown RBP25.02■■□□□ 1.6
TMEM56-203ENST00000456991 RBL2Q08999 1139 aa25.02■■□□□ 1.6
TMEM56-203ENST00000456991 AAMPQ13685 434 aa25.02■■□□□ 1.6
TMEM56-203ENST00000456991 CNKSR3Q6P9H4 555 aa25.02■■□□□ 1.6
TMEM56-203ENST00000456991 DHX38Q92620 1227 aaKnown RBP25.02■■□□□ 1.6
TMEM56-203ENST00000456991 RWDD1Q9H446 243 aaPredicted RBP25.02■■□□□ 1.6
TMEM56-203ENST00000456991 JMJD4Q9H9V9 463 aa25.02■■□□□ 1.6
TMEM56-203ENST00000456991 DIAPH3Q9NSV4 1193 aa25.02■■□□□ 1.6
TMEM56-203ENST00000456991 HDAC6Q9UBN7 1215 aa25.02■■□□□ 1.6
TMEM56-203ENST00000456991 CTNNA3Q9UI47 895 aa25.02■■□□□ 1.6
TMEM56-203ENST00000456991 MRVI1Q9Y6F6 885 aa25.02■■□□□ 1.6
TMEM56-203ENST00000456991 GBF1Q92538 1859 aa25.02■■□□□ 1.6
TMEM56-203ENST00000456991 CXCL10P02778 98 aa25.01■■□□□ 1.59
TMEM56-203ENST00000456991 NR3C2P08235 984 aa25.01■■□□□ 1.59
TMEM56-203ENST00000456991 CKBP12277 381 aa25.01■■□□□ 1.59
TMEM56-203ENST00000456991 PSEN2P49810 448 aa25.01■■□□□ 1.59
TMEM56-203ENST00000456991 GRB10Q13322 594 aa25.01■■□□□ 1.59
TMEM56-203ENST00000456991 IMMTQ16891 758 aaKnown RBP25.01■■□□□ 1.59
TMEM56-203ENST00000456991 B4GALNT3Q6L9W6 998 aa25.01■■□□□ 1.59
TMEM56-203ENST00000456991 SMC5Q8IY18 1101 aa25.01■■□□□ 1.59
TMEM56-203ENST00000456991 PPTC7Q8NI37 304 aa25.01■■□□□ 1.59
TMEM56-203ENST00000456991 HLA-CQ95604 372 aa25.01■■□□□ 1.59
TMEM56-203ENST00000456991 C1QTNF1Q9BXJ1 281 aa25.01■■□□□ 1.59
TMEM56-203ENST00000456991 OSBPL3Q9H4L5 887 aa25.01■■□□□ 1.59
TMEM56-203ENST00000456991 PXMP2Q9NR77 195 aa25.01■■□□□ 1.59
TMEM56-203ENST00000456991 ABHD14A-ACY1A0A1B0GW23 586 aa25■■□□□ 1.59
TMEM56-203ENST00000456991 HIP1O00291 1037 aa25■■□□□ 1.59
TMEM56-203ENST00000456991 CFBP00751 764 aa25■■□□□ 1.59
TMEM56-203ENST00000456991 CHD1LQ86WJ1 897 aa25■■□□□ 1.59
TMEM56-203ENST00000456991 PLEKHM2Q8IWE5 1019 aa25■■□□□ 1.59
TMEM56-203ENST00000456991 DHX37Q8IY37 1157 aaKnown RBP25■■□□□ 1.59
TMEM56-203ENST00000456991 ALG1Q9BT22 464 aa25■■□□□ 1.59
TMEM56-203ENST00000456991 DSCC1Q9BVC3 393 aa25■■□□□ 1.59
TMEM56-203ENST00000456991 KRT23Q9C075 422 aa25■■□□□ 1.59
TMEM56-203ENST00000456991 NBNO60934 754 aa24.99■■□□□ 1.59
TMEM56-203ENST00000456991 EFCAB14O75071 495 aa24.99■■□□□ 1.59
TMEM56-203ENST00000456991 PTK7Q13308 1070 aa24.99■■□□□ 1.59
TMEM56-203ENST00000456991 MFSD10Q14728 455 aa24.99■■□□□ 1.59
TMEM56-203ENST00000456991 RAD9AQ99638 391 aa24.99■■□□□ 1.59
TMEM56-203ENST00000456991 UBAC1Q9BSL1 405 aa24.99■■□□□ 1.59
TMEM56-203ENST00000456991 AMNQ9BXJ7 453 aa24.99■■□□□ 1.59
TMEM56-203ENST00000456991 RAPGEFL1Q9UHV5 662 aa24.99■■□□□ 1.59
TMEM56-203ENST00000456991 LCHNA4D1U4 455 aa24.98■■□□□ 1.59
TMEM56-203ENST00000456991 LPXNO60711 386 aa24.98■■□□□ 1.59
TMEM56-203ENST00000456991 PPFIA4O75335 1185 aa24.98■■□□□ 1.59
TMEM56-203ENST00000456991 F2P00734 622 aa24.98■■□□□ 1.59
TMEM56-203ENST00000456991 DEFB103AP81534 67 aa24.98■■□□□ 1.59
TMEM56-203ENST00000456991 IKBKEQ14164 716 aa24.98■■□□□ 1.59
TMEM56-203ENST00000456991 KIAA0753Q2KHM9 967 aa24.98■■□□□ 1.59
TMEM56-203ENST00000456991 KCNV1Q6PIU1 500 aa24.98■■□□□ 1.59
TMEM56-203ENST00000456991 TMCO2Q7Z6W1 182 aaPredicted RBP24.98■■□□□ 1.59
TMEM56-203ENST00000456991 CNNM2Q9H8M5 875 aa24.98■■□□□ 1.59
TMEM56-203ENST00000456991 MAP3K20Q9NYL2 800 aaKnown RBP24.98■■□□□ 1.59
TMEM56-203ENST00000456991 LMCD1Q9NZU5 365 aa24.98■■□□□ 1.59
TMEM56-203ENST00000456991 SCN5AQ14524 2016 aa24.98■■□□□ 1.59
TMEM56-203ENST00000456991 PRRC2BQ5JSZ5 2229 aaKnown RBP24.97■■□□□ 1.59
TMEM56-203ENST00000456991 HAS3O00219 553 aa24.97■■□□□ 1.59
TMEM56-203ENST00000456991 GJB5O95377 273 aa24.97■■□□□ 1.59
TMEM56-203ENST00000456991 HSD17B4P51659 736 aa24.97■■□□□ 1.59
TMEM56-203ENST00000456991 IFIT1BQ5T764 474 aaKnown RBP24.97■■□□□ 1.59
TMEM56-203ENST00000456991 ZNF286BP0CG31 522 aa24.96■■□□□ 1.59
TMEM56-203ENST00000456991 GHRHRQ02643 423 aa24.96■■□□□ 1.59
TMEM56-203ENST00000456991 NUCB1Q02818 461 aa24.96■■□□□ 1.59
TMEM56-203ENST00000456991 SPRED2Q7Z698 418 aa24.96■■□□□ 1.59
TMEM56-203ENST00000456991 SAMD3Q8N6K7 520 aa24.96■■□□□ 1.59
TMEM56-203ENST00000456991 KLRF2D3W0D1 207 aa24.95■■□□□ 1.58
TMEM56-203ENST00000456991 OPLAHO14841 1288 aa24.95■■□□□ 1.58
TMEM56-203ENST00000456991 MYCLP12524 364 aaPredicted RBP24.95■■□□□ 1.58
TMEM56-203ENST00000456991 HOXD8P13378 290 aaPredicted RBP24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms