RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 DBNDD1Q9H9R9 158 aa20.48■□□□□ 0.87
SEMA3B-209ENST00000456560 A0A1W2PQJ5 194 aa20.47■□□□□ 0.87
SEMA3B-209ENST00000456560 FKBP1AP62942 108 aaKnown RBP20.47■□□□□ 0.87
SEMA3B-209ENST00000456560 IDI2Q9BXS1 227 aa20.47■□□□□ 0.87
SEMA3B-209ENST00000456560 TMX4Q9H1E5 349 aaPredicted RBP20.47■□□□□ 0.87
SEMA3B-209ENST00000456560 DHX36Q9H2U1 1008 aaKnown RBP20.47■□□□□ 0.87
SEMA3B-209ENST00000456560 HAUS4Q9H6D7 363 aa20.47■□□□□ 0.87
SEMA3B-209ENST00000456560 NYAP2Q9P242 653 aa20.47■□□□□ 0.87
SEMA3B-209ENST00000456560 PCDHAC2Q9Y5I4 1007 aa20.47■□□□□ 0.87
SEMA3B-209ENST00000456560 AMPD2Q01433 879 aa20.47■□□□□ 0.87
SEMA3B-209ENST00000456560 PSMD2Q13200 908 aa20.47■□□□□ 0.87
SEMA3B-209ENST00000456560 HYIQ5T013 277 aa20.47■□□□□ 0.87
SEMA3B-209ENST00000456560 CC2D1AQ6P1N0 951 aaPredicted RBP20.47■□□□□ 0.87
SEMA3B-209ENST00000456560 DCAF4Q8WV16 495 aa20.47■□□□□ 0.87
SEMA3B-209ENST00000456560 DDX12PQ92771 950 aa20.47■□□□□ 0.87
SEMA3B-209ENST00000456560 NAP1L4Q99733 375 aaKnown RBP20.47■□□□□ 0.87
SEMA3B-209ENST00000456560 EEF2P13639 858 aaKnown RBP20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 TRIM21P19474 475 aaKnown RBP20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 HDLBPQ00341 1268 aaKnown RBP20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 QRICH1Q2TAL8 776 aa20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 FOXR2Q6PJQ5 311 aa20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 GLT8D2Q9H1C3 349 aa20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 FAM198AQ9UFP1 575 aa20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 ABCB11O95342 1321 aa20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 DDTLA6NHG4 134 aaPredicted RBP20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 SEC31AO94979 1220 aaKnown RBP20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 CACNB3P54284 484 aa20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 CDK17Q00537 523 aa20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 DACT2Q5SW24 774 aa20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 SH3BP5LQ7L8J4 393 aa20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 DNAJC19Q96DA6 116 aa20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 IQCDQ96DY2 449 aa20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 TRIM10Q9UDY6 481 aa20.46■□□□□ 0.87
SEMA3B-209ENST00000456560 ARFGEF1Q9Y6D6 1849 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 CYP2C19P33261 490 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 LRRC63Q05C16 580 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 WHAMMP3Q1A5X7 153 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 SHROOM1Q2M3G4 852 aaPredicted RBP20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 VWA3BQ502W6 1294 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 FKBP15Q5T1M5 1219 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 STRIP1Q5VSL9 837 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 SIAH1Q8IUQ4 282 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 KANSL2Q9H9L4 492 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 PI4KBQ9UBF8 816 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 PUF60Q9UHX1 559 aaKnown RBP20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 A0A0U1RQG5 324 aaPredicted RBP20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 NPM3O75607 178 aaKnown RBP20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 TUBB4BP68371 445 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 KRT83P78385 493 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 SEPT2Q15019 361 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 CERKLQ49MI3 558 aaPredicted RBP20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 SLFN13Q68D06 897 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 TATDN1Q6P1N9 297 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 CCDC125Q86Z20 511 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 KIAA0825Q8IV33 1275 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 CCDC170Q8IYT3 715 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 GJA10Q969M2 543 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 MBOAT7Q96N66 472 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 ZSWIM4Q9H7M6 989 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 ZNHIT6Q9NWK9 470 aaKnown RBP20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 CALCOCO1Q9P1Z2 691 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 GUCA1BQ9UMX6 200 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 PCDHA12Q9UN75 941 aa20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 ZNF646O15015 1829 aaPredicted RBP20.45■□□□□ 0.86
SEMA3B-209ENST00000456560 FAM196BA6NMK8 535 aa20.44■□□□□ 0.86
SEMA3B-209ENST00000456560 PSMD14O00487 310 aa20.44■□□□□ 0.86
SEMA3B-209ENST00000456560 FGFR1OPO95684 399 aaKnown RBP20.44■□□□□ 0.86
SEMA3B-209ENST00000456560 TBC1D8O95759 1140 aa20.44■□□□□ 0.86
SEMA3B-209ENST00000456560 TCP10Q12799 353 aa20.44■□□□□ 0.86
SEMA3B-209ENST00000456560 LRRC55Q6ZSA7 311 aa20.44■□□□□ 0.86
SEMA3B-209ENST00000456560 UPF1Q92900 1129 aaKnown RBP eCLIP20.44■□□□□ 0.865e-9■■■■■ 29.1
SEMA3B-209ENST00000456560 NHEJ1Q9H9Q4 299 aaPredicted RBP20.44■□□□□ 0.86
SEMA3B-209ENST00000456560 SIK3Q9Y2K2 1263 aa20.44■□□□□ 0.86
SEMA3B-209ENST00000456560 CYP3A7-CYP3A51PA0A087WV96 503 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 EIF3CLB5ME19 914 aaKnown RBP20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 USP17L15C9J2P7 530 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 USP17L13C9JLJ4 530 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 USP17L11C9JVI0 530 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 USP17L18D6R9N7 530 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 USP17L22D6RA61 530 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 USP17L17D6RBQ6 530 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 USP17L19D6RCP7 530 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 USP17L20D6RJB6 530 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 IDEP14735 1019 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 CYP3A7P24462 503 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 CYLC1P35663 651 aaPredicted RBP20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 SLC1A4P43007 532 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 USP11P51784 963 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 USP17L24Q0WX57 530 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 USP17L6PQ6QN14 398 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 MSANTD4Q8NCY6 345 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 ZNF622Q969S3 477 aaKnown RBP eCLIP20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 EIF3CQ99613 913 aaKnown RBP20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 NDST4Q9H3R1 872 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 ANKZF1Q9H8Y5 726 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 PCDHA1Q9Y5I3 950 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 SLC26A4O43511 780 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 HNRNPH3P31942 346 aaKnown RBP20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 MAN2A1Q16706 1144 aa20.43■□□□□ 0.86
SEMA3B-209ENST00000456560 PCMTD1Q96MG8 357 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms