RNA–Protein interactions for RNA: ENST00000456378.1

UBP1-205, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-205ENST00000456378 TMEM39AQ9NV64 488 aa27.39■■□□□ 1.98
UBP1-205ENST00000456378 RBM28Q9NW13 759 aaKnown RBP27.39■■□□□ 1.98
UBP1-205ENST00000456378 DDX41Q9UJV9 622 aaKnown RBP27.39■■□□□ 1.98
UBP1-205ENST00000456378 CNTNAP5Q8WYK1 1306 aa27.39■■□□□ 1.97
UBP1-205ENST00000456378 MEIS2O14770 477 aa27.38■■□□□ 1.97
UBP1-205ENST00000456378 CPT1AP50416 773 aa27.38■■□□□ 1.97
UBP1-205ENST00000456378 PURAQ00577 322 aaKnown RBP27.38■■□□□ 1.97
UBP1-205ENST00000456378 ARHGAP1Q07960 439 aa27.38■■□□□ 1.97
UBP1-205ENST00000456378 ITGA7Q13683 1181 aa27.38■■□□□ 1.97
UBP1-205ENST00000456378 FAM126BQ8IXS8 530 aa27.38■■□□□ 1.97
UBP1-205ENST00000456378 GOLGA8AA7E2F4 631 aa27.37■■□□□ 1.97
UBP1-205ENST00000456378 GOLGA8BA8MQT2 603 aa27.37■■□□□ 1.97
UBP1-205ENST00000456378 SOX1O00570 391 aaPredicted RBP27.37■■□□□ 1.97
UBP1-205ENST00000456378 MYL3P08590 195 aa27.37■■□□□ 1.97
UBP1-205ENST00000456378 CASTP20810 708 aaKnown RBP27.37■■□□□ 1.97
UBP1-205ENST00000456378 TDHQ8IZJ6 230 aa27.37■■□□□ 1.97
UBP1-205ENST00000456378 FBXL16Q8N461 479 aa27.37■■□□□ 1.97
UBP1-205ENST00000456378 BRF1Q92994 677 aa27.37■■□□□ 1.97
UBP1-205ENST00000456378 AGXT2Q9BYV1 514 aa27.37■■□□□ 1.97
UBP1-205ENST00000456378 POLR3EQ9NVU0 708 aa27.37■■□□□ 1.97
UBP1-205ENST00000456378 TBX21Q9UL17 535 aa27.37■■□□□ 1.97
UBP1-205ENST00000456378 FRMPD4Q14CM0 1322 aa27.37■■□□□ 1.97
UBP1-205ENST00000456378 MROH7Q68CQ1 1323 aa27.37■■□□□ 1.97
UBP1-205ENST00000456378 PIK3CDO00329 1044 aa27.36■■□□□ 1.97
UBP1-205ENST00000456378 CD4P01730 458 aa27.36■■□□□ 1.97
UBP1-205ENST00000456378 RCAN1P53805 252 aa27.36■■□□□ 1.97
UBP1-205ENST00000456378 FGD1P98174 961 aa27.36■■□□□ 1.97
UBP1-205ENST00000456378 GPKOWQ92917 476 aaPredicted RBP eCLIP27.36■■□□□ 1.974e-7■□□□□ 8.7
UBP1-205ENST00000456378 GH1P01241 217 aa27.35■■□□□ 1.97
UBP1-205ENST00000456378 PSMA5P28066 241 aa27.35■■□□□ 1.97
UBP1-205ENST00000456378 CCND2P30279 289 aa27.35■■□□□ 1.97
UBP1-205ENST00000456378 SMARCC2Q8TAQ2 1214 aa27.35■■□□□ 1.97
UBP1-205ENST00000456378 AFG1LQ8WV93 481 aa27.35■■□□□ 1.97
UBP1-205ENST00000456378 NAP1L2Q9ULW6 460 aaPredicted RBP27.35■■□□□ 1.97
UBP1-205ENST00000456378 MRVI1Q9Y6F6 885 aa27.35■■□□□ 1.97
UBP1-205ENST00000456378 V9GY48 417 aaPredicted RBP27.35■■□□□ 1.97
UBP1-205ENST00000456378 LAMA3Q16787 3333 aa27.35■■□□□ 1.97
UBP1-205ENST00000456378 RAG1P15918 1043 aa27.34■■□□□ 1.97
UBP1-205ENST00000456378 ADD1P35611 737 aaKnown RBP27.34■■□□□ 1.97
UBP1-205ENST00000456378 MRPS9P82933 396 aaKnown RBP27.34■■□□□ 1.97
UBP1-205ENST00000456378 HEATR3Q7Z4Q2 680 aa27.34■■□□□ 1.97
UBP1-205ENST00000456378 MTG1Q9BT17 334 aaPredicted RBP27.34■■□□□ 1.97
UBP1-205ENST00000456378 PSTPIP2Q9H939 334 aa27.34■■□□□ 1.97
UBP1-205ENST00000456378 ZSWIM6Q9HCJ5 1215 aa27.34■■□□□ 1.97
UBP1-205ENST00000456378 SP2Q02086 613 aa27.33■■□□□ 1.97
UBP1-205ENST00000456378 BRDTQ58F21 947 aaPredicted RBP27.33■■□□□ 1.97
UBP1-205ENST00000456378 WWC2Q6AWC2 1192 aa27.33■■□□□ 1.97
UBP1-205ENST00000456378 TYW1BQ6NUM6 668 aa27.33■■□□□ 1.97
UBP1-205ENST00000456378 CUL5Q93034 780 aa27.33■■□□□ 1.97
UBP1-205ENST00000456378 MMP3P08254 477 aa27.32■■□□□ 1.96
UBP1-205ENST00000456378 METAP2P50579 478 aaKnown RBP eCLIP27.32■■□□□ 1.96
UBP1-205ENST00000456378 UBE2SQ16763 222 aa27.32■■□□□ 1.96
UBP1-205ENST00000456378 RUFY3Q7L099 469 aa27.32■■□□□ 1.96
UBP1-205ENST00000456378 PPP1R13LQ8WUF5 828 aa27.32■■□□□ 1.96
UBP1-205ENST00000456378 EMID1Q96A84 441 aaPredicted RBP27.32■■□□□ 1.96
UBP1-205ENST00000456378 TRPV6Q9H1D0 765 aa27.32■■□□□ 1.96
UBP1-205ENST00000456378 KPNA6O60684 536 aa27.31■■□□□ 1.96
UBP1-205ENST00000456378 TIMP1P01033 207 aa27.31■■□□□ 1.96
UBP1-205ENST00000456378 EPHB4P54760 987 aa27.31■■□□□ 1.96
UBP1-205ENST00000456378 LRCH3Q96II8 777 aa27.31■■□□□ 1.96
UBP1-205ENST00000456378 SEZ6LQ9BYH1 1024 aa27.31■■□□□ 1.96
UBP1-205ENST00000456378 SZT2Q5T011 3432 aa27.3■■□□□ 1.96
UBP1-205ENST00000456378 SCN10AQ9Y5Y9 1956 aa27.3■■□□□ 1.96
UBP1-205ENST00000456378 TLR3O15455 904 aaKnown RBP27.3■■□□□ 1.96
UBP1-205ENST00000456378 B4GALT4O60513 344 aa27.3■■□□□ 1.96
UBP1-205ENST00000456378 NBPF20Q3BBV1 942 aa27.3■■□□□ 1.96
UBP1-205ENST00000456378 LRIT3Q3SXY7 679 aa27.3■■□□□ 1.96
UBP1-205ENST00000456378 C9orf50Q5SZB4 431 aa27.3■■□□□ 1.96
UBP1-205ENST00000456378 ALDH8A1Q9H2A2 487 aaPredicted RBP27.3■■□□□ 1.96
UBP1-205ENST00000456378 BCAS3Q9H6U6 928 aa27.3■■□□□ 1.96
UBP1-205ENST00000456378 RTEL1Q9NZ71 1219 aa27.3■■□□□ 1.96
UBP1-205ENST00000456378 NID2Q14112 1375 aa27.3■■□□□ 1.96
UBP1-205ENST00000456378 SORBS3O60504 671 aa27.29■■□□□ 1.96
UBP1-205ENST00000456378 TGFB3P10600 412 aa27.29■■□□□ 1.96
UBP1-205ENST00000456378 EVCP57679 992 aa27.29■■□□□ 1.96
UBP1-205ENST00000456378 SEMA3FQ13275 785 aa27.29■■□□□ 1.96
UBP1-205ENST00000456378 LAMC2Q13753 1193 aa27.29■■□□□ 1.96
UBP1-205ENST00000456378 TOB2Q14106 344 aaPredicted RBP27.29■■□□□ 1.96
UBP1-205ENST00000456378 SHHQ15465 462 aa27.29■■□□□ 1.96
UBP1-205ENST00000456378 CELF3Q5SZQ8 465 aaKnown RBP27.29■■□□□ 1.96
UBP1-205ENST00000456378 MYSM1Q5VVJ2 828 aa27.29■■□□□ 1.96
UBP1-205ENST00000456378 KCNV1Q6PIU1 500 aa27.29■■□□□ 1.96
UBP1-205ENST00000456378 DHX37Q8IY37 1157 aaKnown RBP27.29■■□□□ 1.96
UBP1-205ENST00000456378 KAT2BQ92831 832 aa27.29■■□□□ 1.96
UBP1-205ENST00000456378 INPP4AQ96PE3 977 aaPredicted RBP27.29■■□□□ 1.96
UBP1-205ENST00000456378 TM6SF1Q9BZW5 370 aa27.29■■□□□ 1.96
UBP1-205ENST00000456378 STXBP3O00186 592 aa27.28■■□□□ 1.96
UBP1-205ENST00000456378 UBA1P22314 1058 aaKnown RBP27.28■■□□□ 1.96
UBP1-205ENST00000456378 PCNX4Q63HM2 1172 aa27.28■■□□□ 1.96
UBP1-205ENST00000456378 PPP1R12CQ9BZL4 782 aa27.28■■□□□ 1.96
UBP1-205ENST00000456378 CYP46A1Q9Y6A2 500 aa27.28■■□□□ 1.96
UBP1-205ENST00000456378 CCDC196A0A1B0GTZ2 297 aa27.27■■□□□ 1.96
UBP1-205ENST00000456378 SPATA31C2B4DYI2 1134 aa27.27■■□□□ 1.96
UBP1-205ENST00000456378 STAM2O75886 525 aa27.27■■□□□ 1.96
UBP1-205ENST00000456378 GGPS1O95749 300 aa27.27■■□□□ 1.96
UBP1-205ENST00000456378 PDIA3P30101 505 aaKnown RBP27.27■■□□□ 1.96
UBP1-205ENST00000456378 ICAM3P32942 547 aa27.27■■□□□ 1.96
UBP1-205ENST00000456378 PPTC7Q8NI37 304 aa27.27■■□□□ 1.96
UBP1-205ENST00000456378 UPF3BQ9BZI7 483 aaKnown RBP27.27■■□□□ 1.96
UBP1-205ENST00000456378 TRMT13Q9NUP7 481 aaKnown RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms