RNA–Protein interactions for RNA: ENST00000455768.6

YIPF3-204, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-204ENST00000455768 IGFBP4P22692 258 aa23.62■■□□□ 1.37
YIPF3-204ENST00000455768 HSD17B4P51659 736 aa23.62■■□□□ 1.37
YIPF3-204ENST00000455768 CCDC85BQ15834 202 aaPredicted RBP23.62■■□□□ 1.37
YIPF3-204ENST00000455768 TTC22Q5TAA0 569 aa23.62■■□□□ 1.37
YIPF3-204ENST00000455768 ARHGEF16Q5VV41 709 aa23.62■■□□□ 1.37
YIPF3-204ENST00000455768 PPP2R2DQ66LE6 453 aa23.62■■□□□ 1.37
YIPF3-204ENST00000455768 GDF6Q6KF10 455 aaPredicted RBP23.62■■□□□ 1.37
YIPF3-204ENST00000455768 MYH6P13533 1939 aa23.62■■□□□ 1.37
YIPF3-204ENST00000455768 TANC1Q9C0D5 1861 aa23.62■■□□□ 1.37
YIPF3-204ENST00000455768 KIAA1217Q5T5P2 1943 aa23.61■■□□□ 1.37
YIPF3-204ENST00000455768 NR3C2P08235 984 aa23.61■■□□□ 1.37
YIPF3-204ENST00000455768 GHRHRQ02643 423 aa23.61■■□□□ 1.37
YIPF3-204ENST00000455768 PTH1RQ03431 593 aa23.61■■□□□ 1.37
YIPF3-204ENST00000455768 GPNMBQ14956 572 aa23.61■■□□□ 1.37
YIPF3-204ENST00000455768 PTGISQ16647 500 aa23.61■■□□□ 1.37
YIPF3-204ENST00000455768 DHX38Q92620 1227 aaKnown RBP23.61■■□□□ 1.37
YIPF3-204ENST00000455768 AMNQ9BXJ7 453 aa23.61■■□□□ 1.37
YIPF3-204ENST00000455768 TRANK1O15050 2925 aa23.6■■□□□ 1.37
YIPF3-204ENST00000455768 PALM3A6NDB9 673 aaPredicted RBP23.6■■□□□ 1.37
YIPF3-204ENST00000455768 RGS20O76081 388 aa23.6■■□□□ 1.37
YIPF3-204ENST00000455768 ARHGEF15O94989 841 aa23.6■■□□□ 1.37
YIPF3-204ENST00000455768 TJAP1Q5JTD0 557 aa23.6■■□□□ 1.37
YIPF3-204ENST00000455768 SESTD1Q86VW0 696 aa23.6■■□□□ 1.37
YIPF3-204ENST00000455768 NOD1Q9Y239 953 aa23.6■■□□□ 1.37
YIPF3-204ENST00000455768 EIF3JO75822 258 aaKnown RBP23.59■■□□□ 1.37
YIPF3-204ENST00000455768 CA3P07451 260 aa23.59■■□□□ 1.37
YIPF3-204ENST00000455768 CYP21A2P08686 494 aa23.59■■□□□ 1.37
YIPF3-204ENST00000455768 HOXA13P31271 388 aaPredicted RBP23.59■■□□□ 1.37
YIPF3-204ENST00000455768 RFC2P35250 354 aa23.59■■□□□ 1.37
YIPF3-204ENST00000455768 RETREG2Q8NC44 543 aa23.59■■□□□ 1.37
YIPF3-204ENST00000455768 IL31RAQ8NI17 732 aa23.59■■□□□ 1.37
YIPF3-204ENST00000455768 RFXAPO00287 272 aa23.58■■□□□ 1.37
YIPF3-204ENST00000455768 ZBTB5O15062 677 aa23.58■■□□□ 1.37
YIPF3-204ENST00000455768 BFSP2Q13515 415 aa23.58■■□□□ 1.37
YIPF3-204ENST00000455768 EMID1Q96A84 441 aaPredicted RBP23.58■■□□□ 1.37
YIPF3-204ENST00000455768 ZFP91Q96JP5 570 aaPredicted RBP23.58■■□□□ 1.37
YIPF3-204ENST00000455768 PDCD2LQ9BRP1 358 aa23.58■■□□□ 1.37
YIPF3-204ENST00000455768 FTOQ9C0B1 505 aaKnown RBP eCLIP23.58■■□□□ 1.37
YIPF3-204ENST00000455768 SUPT16HQ9Y5B9 1047 aaKnown RBP23.58■■□□□ 1.37
YIPF3-204ENST00000455768 PCDHA1Q9Y5I3 950 aa23.58■■□□□ 1.37
YIPF3-204ENST00000455768 MRVI1Q9Y6F6 885 aa23.58■■□□□ 1.37
YIPF3-204ENST00000455768 TRIP12Q14669 1992 aaPredicted RBP23.58■■□□□ 1.36
YIPF3-204ENST00000455768 EPOPA6NHQ4 379 aa23.57■■□□□ 1.36
YIPF3-204ENST00000455768 CYTH3O43739 400 aa23.57■■□□□ 1.36
YIPF3-204ENST00000455768 SORBS3O60504 671 aa23.57■■□□□ 1.36
YIPF3-204ENST00000455768 ZNF286BP0CG31 522 aa23.57■■□□□ 1.36
YIPF3-204ENST00000455768 ACTN1P12814 892 aa23.57■■□□□ 1.36
YIPF3-204ENST00000455768 CASTP20810 708 aaKnown RBP23.57■■□□□ 1.36
YIPF3-204ENST00000455768 CHMLP26374 656 aa23.57■■□□□ 1.36
YIPF3-204ENST00000455768 GRM4Q14833 912 aa23.57■■□□□ 1.36
YIPF3-204ENST00000455768 DGKDQ16760 1214 aa23.57■■□□□ 1.36
YIPF3-204ENST00000455768 TMEM67Q5HYA8 995 aa23.57■■□□□ 1.36
YIPF3-204ENST00000455768 STOX1Q6ZVD7 989 aa23.57■■□□□ 1.36
YIPF3-204ENST00000455768 HOMER1Q86YM7 354 aa23.57■■□□□ 1.36
YIPF3-204ENST00000455768 SYMPKQ92797 1274 aaKnown RBP23.57■■□□□ 1.36
YIPF3-204ENST00000455768 CERS4Q9HA82 394 aa23.57■■□□□ 1.36
YIPF3-204ENST00000455768 HDAC6Q9UBN7 1215 aa23.57■■□□□ 1.36
YIPF3-204ENST00000455768 BAZ2BQ9UIF8 2168 aaKnown RBP23.57■■□□□ 1.36
YIPF3-204ENST00000455768 MYCLP12524 364 aaPredicted RBP23.56■■□□□ 1.36
YIPF3-204ENST00000455768 TCTN1Q2MV58 587 aa23.56■■□□□ 1.36
YIPF3-204ENST00000455768 PPTC7Q8NI37 304 aa23.56■■□□□ 1.36
YIPF3-204ENST00000455768 WNT8BQ93098 351 aa23.56■■□□□ 1.36
YIPF3-204ENST00000455768 PIGSQ96S52 555 aa23.56■■□□□ 1.36
YIPF3-204ENST00000455768 SLC9A7Q96T83 725 aa23.56■■□□□ 1.36
YIPF3-204ENST00000455768 THEGQ9P2T0 379 aa23.56■■□□□ 1.36
YIPF3-204ENST00000455768 GTF2IRD1Q9UHL9 959 aa23.56■■□□□ 1.36
YIPF3-204ENST00000455768 HAS3O00219 553 aa23.55■■□□□ 1.36
YIPF3-204ENST00000455768 F2P00734 622 aa23.55■■□□□ 1.36
YIPF3-204ENST00000455768 PSEN2P49810 448 aa23.55■■□□□ 1.36
YIPF3-204ENST00000455768 SP2Q02086 613 aa23.55■■□□□ 1.36
YIPF3-204ENST00000455768 HIC1Q14526 733 aa23.55■■□□□ 1.36
YIPF3-204ENST00000455768 SPRED2Q7Z698 418 aa23.55■■□□□ 1.36
YIPF3-204ENST00000455768 TMCO2Q7Z6W1 182 aaPredicted RBP23.55■■□□□ 1.36
YIPF3-204ENST00000455768 VSIG10LQ86VR7 867 aa23.55■■□□□ 1.36
YIPF3-204ENST00000455768 HERC6Q8IVU3 1022 aa23.55■■□□□ 1.36
YIPF3-204ENST00000455768 CAGE1Q8TC20 777 aa23.55■■□□□ 1.36
YIPF3-204ENST00000455768 ATXN2LQ8WWM7 1075 aaKnown RBP23.55■■□□□ 1.36
YIPF3-204ENST00000455768 GPKOWQ92917 476 aaPredicted RBP eCLIP23.55■■□□□ 1.36
YIPF3-204ENST00000455768 ALG1Q9BT22 464 aa23.55■■□□□ 1.36
YIPF3-204ENST00000455768 RIOX1Q9H6W3 641 aa23.55■■□□□ 1.36
YIPF3-204ENST00000455768 PRRC2BQ5JSZ5 2229 aaKnown RBP23.55■■□□□ 1.36
YIPF3-204ENST00000455768 XIRP2A4UGR9 3374 aa23.54■■□□□ 1.36
YIPF3-204ENST00000455768 IFIT3O14879 490 aaKnown RBP23.54■■□□□ 1.36
YIPF3-204ENST00000455768 HOXD8P13378 290 aaPredicted RBP23.54■■□□□ 1.36
YIPF3-204ENST00000455768 ZNF200P98182 395 aaPredicted RBP23.54■■□□□ 1.36
YIPF3-204ENST00000455768 RBL2Q08999 1139 aa23.54■■□□□ 1.36
YIPF3-204ENST00000455768 TROAPQ12815 778 aa23.54■■□□□ 1.36
YIPF3-204ENST00000455768 LAMC2Q13753 1193 aa23.54■■□□□ 1.36
YIPF3-204ENST00000455768 PGM5Q15124 567 aa23.54■■□□□ 1.36
YIPF3-204ENST00000455768 HSDL1Q3SXM5 330 aa23.54■■□□□ 1.36
YIPF3-204ENST00000455768 MYSM1Q5VVJ2 828 aa23.54■■□□□ 1.36
YIPF3-204ENST00000455768 LRRC8DQ7L1W4 858 aa23.54■■□□□ 1.36
YIPF3-204ENST00000455768 DHX37Q8IY37 1157 aaKnown RBP23.54■■□□□ 1.36
YIPF3-204ENST00000455768 PHOSPHO2Q8TCD6 241 aa23.54■■□□□ 1.36
YIPF3-204ENST00000455768 AFAP1L1Q8TED9 768 aa23.54■■□□□ 1.36
YIPF3-204ENST00000455768 ASB2Q96Q27 587 aa23.54■■□□□ 1.36
YIPF3-204ENST00000455768 U3KPZ7 1027 aaPredicted RBP23.54■■□□□ 1.36
YIPF3-204ENST00000455768 PTPRSQ13332 1948 aa23.53■■□□□ 1.36
YIPF3-204ENST00000455768 E7EWF7 191 aa23.53■■□□□ 1.36
YIPF3-204ENST00000455768 NBNO60934 754 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms