RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 MARCH2Q9P0N8 246 aa4.06□□□□□ -1.76
LINC02540-201ENST00000455554 CGGBP1Q9UFW8 167 aaPredicted RBP4.06□□□□□ -1.76
LINC02540-201ENST00000455554 LTBP3Q9NS15 1303 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 MUSKO15146 869 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 STAT5AP42229 794 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 PPP2CBP62714 309 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 PPP2CAP67775 309 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 ADAM9Q13443 819 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 R3HDM1Q15032 1099 aaKnown RBP4.05□□□□□ -1.76
LINC02540-201ENST00000455554 GNPTABQ3T906 1256 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 SPDYAQ5MJ70 313 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 MBLAC2Q68D91 279 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 PKN3Q6P5Z2 889 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 ARHGEF18Q6ZSZ5 1173 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 ARHGEF39Q8N4T4 335 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 MBD6Q96DN6 1003 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 YTHDC1Q96MU7 727 aaKnown RBP4.05□□□□□ -1.76
LINC02540-201ENST00000455554 TMEM168Q9H0V1 697 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 SEMA4AQ9H3S1 761 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 L2HGDHQ9H9P8 463 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 JADE2Q9NQC1 790 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 PPT2Q9UMR5 302 aa4.05□□□□□ -1.76
LINC02540-201ENST00000455554 PATE3B3GLJ2 98 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 EPHX1P07099 455 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 THBDP07204 575 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 ERCC3P19447 782 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 IL13P35225 146 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 SLC6A11P48066 632 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 NKX3-2P78367 333 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 CR1LQ2VPA4 569 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 IGFL4Q6B9Z1 124 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 MILR1Q7Z6M3 343 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 TEX2Q8IWB9 1127 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 DPF3Q92784 378 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 RCC1LQ96I51 464 aaKnown RBP4.04□□□□□ -1.76
LINC02540-201ENST00000455554 FGD4Q96M96 766 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 MMP19Q99542 508 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 YIPF4Q9BSR8 244 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 CLEC1BQ9P126 229 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 TESMINQ9Y4I5 508 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 SLC12A7Q9Y666 1083 aa4.04□□□□□ -1.76
LINC02540-201ENST00000455554 C22orf46C9J442 243 aa4.03□□□□□ -1.76
LINC02540-201ENST00000455554 ZNF623O75123 536 aa4.03□□□□□ -1.76
LINC02540-201ENST00000455554 PLS3P13797 630 aa4.03□□□□□ -1.76
LINC02540-201ENST00000455554 SLC7A5Q01650 507 aa4.03□□□□□ -1.76
LINC02540-201ENST00000455554 MRPL58Q14197 206 aaKnown RBP4.03□□□□□ -1.76
LINC02540-201ENST00000455554 SLFN13Q68D06 897 aa4.03□□□□□ -1.76
LINC02540-201ENST00000455554 KBTBD2Q8IY47 623 aa4.03□□□□□ -1.76
LINC02540-201ENST00000455554 CLIC6Q96NY7 704 aa4.03□□□□□ -1.76
LINC02540-201ENST00000455554 ZNF341Q9BYN7 854 aa4.03□□□□□ -1.76
LINC02540-201ENST00000455554 PHAXQ9H814 394 aaKnown RBP4.03□□□□□ -1.76
LINC02540-201ENST00000455554 BTG4Q9NY30 223 aa4.03□□□□□ -1.76
LINC02540-201ENST00000455554 SUGT1Q9Y2Z0 365 aa4.03□□□□□ -1.76
LINC02540-201ENST00000455554 CYP7B1O75881 506 aa4.02□□□□□ -1.77
LINC02540-201ENST00000455554 TGFB2P61812 414 aa4.02□□□□□ -1.77
LINC02540-201ENST00000455554 FHL2Q14192 279 aa4.02□□□□□ -1.77
LINC02540-201ENST00000455554 MROH9Q5TGP6 573 aa4.02□□□□□ -1.77
LINC02540-201ENST00000455554 RIOX2Q8IUF8 465 aa4.02□□□□□ -1.77
LINC02540-201ENST00000455554 COPS5Q92905 334 aa4.02□□□□□ -1.77
LINC02540-201ENST00000455554 ZSWIM3Q96MP5 696 aa4.02□□□□□ -1.77
LINC02540-201ENST00000455554 PCDHB10Q9UN67 800 aa4.02□□□□□ -1.77
LINC02540-201ENST00000455554 NPIPB8E9PQR5 432 aa4.01□□□□□ -1.77
LINC02540-201ENST00000455554 B4GALT4O60513 344 aa4.01□□□□□ -1.77
LINC02540-201ENST00000455554 MLLT6P55198 1093 aaPredicted RBP4.01□□□□□ -1.77
LINC02540-201ENST00000455554 SCRN1Q12765 414 aa4.01□□□□□ -1.77
LINC02540-201ENST00000455554 KLHL36Q8N4N3 616 aa4.01□□□□□ -1.77
LINC02540-201ENST00000455554 Q8TCH9 128 aa4.01□□□□□ -1.77
LINC02540-201ENST00000455554 ZCCHC14Q8WYQ9 949 aaKnown RBP4.01□□□□□ -1.77
LINC02540-201ENST00000455554 WRNIP1Q96S55 665 aa4.01□□□□□ -1.77
LINC02540-201ENST00000455554 CRBNQ96SW2 442 aa4.01□□□□□ -1.77
LINC02540-201ENST00000455554 BCL11AQ9H165 835 aa4.01□□□□□ -1.77
LINC02540-201ENST00000455554 MEGF9Q9H1U4 602 aa4.01□□□□□ -1.77
LINC02540-201ENST00000455554 GPRC5CQ9NQ84 441 aa4.01□□□□□ -1.77
LINC02540-201ENST00000455554 C11orf21Q9P2W6 132 aa4.01□□□□□ -1.77
LINC02540-201ENST00000455554 FTSJ1Q9UET6 329 aa4.01□□□□□ -1.77
LINC02540-201ENST00000455554 FPR2P25090 351 aa4□□□□□ -1.77
LINC02540-201ENST00000455554 SMN1Q16637 294 aaKnown RBP4□□□□□ -1.77
LINC02540-201ENST00000455554 INF2Q27J81 1249 aa4□□□□□ -1.77
LINC02540-201ENST00000455554 HS1BP3Q53T59 392 aa4□□□□□ -1.77
LINC02540-201ENST00000455554 TOE1Q96GM8 510 aaKnown RBP4□□□□□ -1.77
LINC02540-201ENST00000455554 TMEM209Q96SK2 561 aa4□□□□□ -1.77
LINC02540-201ENST00000455554 BARX1Q9HBU1 254 aaPredicted RBP4□□□□□ -1.77
LINC02540-201ENST00000455554 CROTQ9UKG9 612 aa4□□□□□ -1.77
LINC02540-201ENST00000455554 WASF3Q9UPY6 502 aa4□□□□□ -1.77
LINC02540-201ENST00000455554 AKT3Q9Y243 479 aa4□□□□□ -1.77
LINC02540-201ENST00000455554 ZNF652Q9Y2D9 606 aa4□□□□□ -1.77
LINC02540-201ENST00000455554 A0A1W2PQH9 124 aa3.99□□□□□ -1.77
LINC02540-201ENST00000455554 KCNH1O95259 989 aa3.99□□□□□ -1.77
LINC02540-201ENST00000455554 RPL11P62913 178 aaKnown RBP3.99□□□□□ -1.77
LINC02540-201ENST00000455554 PURAQ00577 322 aaKnown RBP3.99□□□□□ -1.77
LINC02540-201ENST00000455554 NFATC3Q12968 1075 aa3.99□□□□□ -1.77
LINC02540-201ENST00000455554 FOXE3Q13461 319 aa3.99□□□□□ -1.77
LINC02540-201ENST00000455554 ZNF326Q5BKZ1 582 aaKnown RBP3.99□□□□□ -1.77
LINC02540-201ENST00000455554 TRMT10BQ6PF06 316 aaKnown RBP3.99□□□□□ -1.77
LINC02540-201ENST00000455554 CCDC81Q6ZN84 652 aa3.99□□□□□ -1.77
LINC02540-201ENST00000455554 CEP68Q76N32 757 aa3.99□□□□□ -1.77
LINC02540-201ENST00000455554 Q8N1Y9 231 aa3.99□□□□□ -1.77
LINC02540-201ENST00000455554 CRACR2BQ8N4Y2 399 aaPredicted RBP3.99□□□□□ -1.77
LINC02540-201ENST00000455554 C19orf47Q8N9M1 422 aaKnown RBP3.99□□□□□ -1.77
LINC02540-201ENST00000455554 TMEM87AQ8NBN3 555 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms