RNA–Protein interactions for RNA: ENST00000455240.1

PTPA-225, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-225ENST00000455240 CA3P07451 260 aa18.85■□□□□ 0.61
PTPA-225ENST00000455240 EIF2AK2P19525 551 aaKnown RBP18.85■□□□□ 0.61
PTPA-225ENST00000455240 MRPS5P82675 430 aaKnown RBP18.85■□□□□ 0.61
PTPA-225ENST00000455240 ARHGEF16Q5VV41 709 aa18.85■□□□□ 0.61
PTPA-225ENST00000455240 CAGE1Q8TC20 777 aa18.85■□□□□ 0.61
PTPA-225ENST00000455240 PHOSPHO2Q8TCD6 241 aa18.85■□□□□ 0.61
PTPA-225ENST00000455240 FTOQ9C0B1 505 aaKnown RBP eCLIP18.85■□□□□ 0.61
PTPA-225ENST00000455240 VAT1LQ9HCJ6 419 aa18.85■□□□□ 0.61
PTPA-225ENST00000455240 BAIAP3O94812 1187 aa18.84■□□□□ 0.61
PTPA-225ENST00000455240 DGKDQ16760 1214 aa18.84■□□□□ 0.61
PTPA-225ENST00000455240 IFIT1BQ5T764 474 aaKnown RBP18.84■□□□□ 0.61
PTPA-225ENST00000455240 GDF6Q6KF10 455 aaPredicted RBP18.84■□□□□ 0.61
PTPA-225ENST00000455240 CHST3Q7LGC8 479 aa18.84■□□□□ 0.61
PTPA-225ENST00000455240 AFAP1L1Q8TED9 768 aa18.84■□□□□ 0.61
PTPA-225ENST00000455240 KAT2BQ92831 832 aa18.84■□□□□ 0.61
PTPA-225ENST00000455240 EMID1Q96A84 441 aaPredicted RBP18.84■□□□□ 0.61
PTPA-225ENST00000455240 CTAGE1Q96RT6 745 aa18.84■□□□□ 0.61
PTPA-225ENST00000455240 AMNQ9BXJ7 453 aa18.84■□□□□ 0.61
PTPA-225ENST00000455240 TSPYL2Q9H2G4 693 aaPredicted RBP18.84■□□□□ 0.61
PTPA-225ENST00000455240 PXMP2Q9NR77 195 aa18.84■□□□□ 0.61
PTPA-225ENST00000455240 EIF3JO75822 258 aaKnown RBP18.83■□□□□ 0.6
PTPA-225ENST00000455240 CFBP00751 764 aa18.83■□□□□ 0.6
PTPA-225ENST00000455240 NR3C2P08235 984 aa18.83■□□□□ 0.6
PTPA-225ENST00000455240 CASTP20810 708 aaKnown RBP18.83■□□□□ 0.6
PTPA-225ENST00000455240 HSD17B4P51659 736 aa18.83■□□□□ 0.6
PTPA-225ENST00000455240 GHRHRQ02643 423 aa18.83■□□□□ 0.6
PTPA-225ENST00000455240 HERC6Q8IVU3 1022 aa18.83■□□□□ 0.6
PTPA-225ENST00000455240 MICALL1Q8N3F8 863 aa18.83■□□□□ 0.6
PTPA-225ENST00000455240 STAG2Q8N3U4 1231 aa18.83■□□□□ 0.6
PTPA-225ENST00000455240 EXOC6Q8TAG9 804 aa18.83■□□□□ 0.6
PTPA-225ENST00000455240 ADAMTS19Q8TE59 1207 aa18.83■□□□□ 0.6
PTPA-225ENST00000455240 DDX41Q9UJV9 622 aaKnown RBP18.83■□□□□ 0.6
PTPA-225ENST00000455240 MRVI1Q9Y6F6 885 aa18.83■□□□□ 0.6
PTPA-225ENST00000455240 MYH7BA7E2Y1 1941 aa18.82■□□□□ 0.6
PTPA-225ENST00000455240 PTPRSQ13332 1948 aa18.82■□□□□ 0.6
PTPA-225ENST00000455240 REV3LO60673 3130 aa18.82■□□□□ 0.6
PTPA-225ENST00000455240 OPLAHO14841 1288 aa18.82■□□□□ 0.6
PTPA-225ENST00000455240 RBL2Q08999 1139 aa18.82■□□□□ 0.6
PTPA-225ENST00000455240 SEC23AQ15436 765 aa18.82■□□□□ 0.6
PTPA-225ENST00000455240 IL27Q8NEV9 243 aa18.82■□□□□ 0.6
PTPA-225ENST00000455240 PPTC7Q8NI37 304 aa18.82■□□□□ 0.6
PTPA-225ENST00000455240 DHX38Q92620 1227 aaKnown RBP18.82■□□□□ 0.6
PTPA-225ENST00000455240 MTMR8Q96EF0 704 aa18.82■□□□□ 0.6
PTPA-225ENST00000455240 KATNAL1Q9BW62 490 aa18.82■□□□□ 0.6
PTPA-225ENST00000455240 IL25Q9H293 177 aa18.82■□□□□ 0.6
PTPA-225ENST00000455240 GTF2IRD1Q9UHL9 959 aa18.82■□□□□ 0.6
PTPA-225ENST00000455240 KIF28PB7ZC32 967 aa18.81■□□□□ 0.6
PTPA-225ENST00000455240 KLRF2D3W0D1 207 aa18.81■□□□□ 0.6
PTPA-225ENST00000455240 F2P00734 622 aa18.81■□□□□ 0.6
PTPA-225ENST00000455240 SELPP16109 830 aa18.81■□□□□ 0.6
PTPA-225ENST00000455240 KCNJ6P48051 423 aa18.81■□□□□ 0.6
PTPA-225ENST00000455240 LAMC2Q13753 1193 aa18.81■□□□□ 0.6
PTPA-225ENST00000455240 LRRC8DQ7L1W4 858 aa18.81■□□□□ 0.6
PTPA-225ENST00000455240 ZBTB5O15062 677 aa18.8■□□□□ 0.6
PTPA-225ENST00000455240 GTPBP6O43824 516 aaPredicted RBP18.8■□□□□ 0.6
PTPA-225ENST00000455240 PPP1R11O60927 126 aaPredicted RBP18.8■□□□□ 0.6
PTPA-225ENST00000455240 PARNO95453 639 aaKnown RBP18.8■□□□□ 0.6
PTPA-225ENST00000455240 ZNF286BP0CG31 522 aa18.8■□□□□ 0.6
PTPA-225ENST00000455240 POU3F3P20264 500 aaPredicted RBP18.8■□□□□ 0.6
PTPA-225ENST00000455240 PSEN2P49810 448 aa18.8■□□□□ 0.6
PTPA-225ENST00000455240 TAP1Q03518 808 aa18.8■□□□□ 0.6
PTPA-225ENST00000455240 C7orf31Q8N865 590 aa18.8■□□□□ 0.6
PTPA-225ENST00000455240 YTHDC1Q96MU7 727 aaKnown RBP18.8■□□□□ 0.6
PTPA-225ENST00000455240 PDCD2LQ9BRP1 358 aa18.8■□□□□ 0.6
PTPA-225ENST00000455240 CERS4Q9HA82 394 aa18.8■□□□□ 0.6
PTPA-225ENST00000455240 MAP3K20Q9NYL2 800 aaKnown RBP18.8■□□□□ 0.6
PTPA-225ENST00000455240 HDAC6Q9UBN7 1215 aa18.8■□□□□ 0.6
PTPA-225ENST00000455240 MAD2L2Q9UI95 211 aa18.8■□□□□ 0.6
PTPA-225ENST00000455240 PCDHA1Q9Y5I3 950 aa18.8■□□□□ 0.6
PTPA-225ENST00000455240 MTCH2Q9Y6C9 303 aa18.8■□□□□ 0.6
PTPA-225ENST00000455240 BAZ2BQ9UIF8 2168 aaKnown RBP18.8■□□□□ 0.6
PTPA-225ENST00000455240 PALM3A6NDB9 673 aaPredicted RBP18.79■□□□□ 0.6
PTPA-225ENST00000455240 EPOPA6NHQ4 379 aa18.79■□□□□ 0.6
PTPA-225ENST00000455240 RFXAPO00287 272 aa18.79■□□□□ 0.6
PTPA-225ENST00000455240 ARHGEF15O94989 841 aa18.79■□□□□ 0.6
PTPA-225ENST00000455240 HOXD8P13378 290 aaPredicted RBP18.79■□□□□ 0.6
PTPA-225ENST00000455240 WDR5P61964 334 aaKnown RBP18.79■□□□□ 0.6
PTPA-225ENST00000455240 MFSD10Q14728 455 aa18.79■□□□□ 0.6
PTPA-225ENST00000455240 GPNMBQ14956 572 aa18.79■□□□□ 0.6
PTPA-225ENST00000455240 STOX1Q6ZVD7 989 aa18.79■□□□□ 0.6
PTPA-225ENST00000455240 CYB5R4Q7L1T6 521 aa18.79■□□□□ 0.6
PTPA-225ENST00000455240 DHX37Q8IY37 1157 aaKnown RBP18.79■□□□□ 0.6
PTPA-225ENST00000455240 SAMD3Q8N6K7 520 aa18.79■□□□□ 0.6
PTPA-225ENST00000455240 ARNTL2Q8WYA1 636 aa18.79■□□□□ 0.6
PTPA-225ENST00000455240 UHRF1Q96T88 793 aaPredicted RBP18.79■□□□□ 0.6
PTPA-225ENST00000455240 ALG1Q9BT22 464 aa18.79■□□□□ 0.6
PTPA-225ENST00000455240 COL4A4P53420 1690 aaPredicted RBP18.79■□□□□ 0.6
PTPA-225ENST00000455240 HAS3O00219 553 aa18.78■□□□□ 0.6
PTPA-225ENST00000455240 TLL1O43897 1013 aa18.78■□□□□ 0.6
PTPA-225ENST00000455240 RGS20O76081 388 aa18.78■□□□□ 0.6
PTPA-225ENST00000455240 CXCL10P02778 98 aa18.78■□□□□ 0.6
PTPA-225ENST00000455240 CKBP12277 381 aa18.78■□□□□ 0.6
PTPA-225ENST00000455240 MYCLP12524 364 aaPredicted RBP18.78■□□□□ 0.6
PTPA-225ENST00000455240 TRDNQ13061 729 aa18.78■□□□□ 0.6
PTPA-225ENST00000455240 KIAA0753Q2KHM9 967 aa18.78■□□□□ 0.6
PTPA-225ENST00000455240 CNKSR3Q6P9H4 555 aa18.78■□□□□ 0.6
PTPA-225ENST00000455240 KCNV1Q6PIU1 500 aa18.78■□□□□ 0.6
PTPA-225ENST00000455240 TCF20Q9UGU0 1960 aaKnown RBP18.77■□□□□ 0.6
PTPA-225ENST00000455240 NBNO60934 754 aa18.77■□□□□ 0.6
PTPA-225ENST00000455240 GSPT1P15170 499 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms