RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 TBX3O15119 743 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 EIF3JO75822 258 aaKnown RBP12.79□□□□□ -0.36
TRAF4-206ENST00000454852 CCND2P30279 289 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 PRMT2P55345 433 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 SETQ01105 290 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-206ENST00000454852 DNM1Q05193 864 aaKnown RBP12.79□□□□□ -0.36
TRAF4-206ENST00000454852 SLC39A14Q15043 492 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 STXBP2Q15833 593 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 LETM2Q2VYF4 491 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 FOXD4L5Q5VV16 416 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-206ENST00000454852 OLFML2BQ68BL8 750 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 C4orf32Q8N8J7 132 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 IL31RAQ8NI17 732 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 FOXD4L4Q8WXT5 416 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-206ENST00000454852 MAML3Q96JK9 1138 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 INPP4AQ96PE3 977 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-206ENST00000454852 APBA2Q99767 749 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 MXRA8Q9BRK3 442 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 ARHGAP39Q9C0H5 1083 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 SCAND2PQ9GZW5 306 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-206ENST00000454852 RCOR1Q9UKL0 485 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 CEP131Q9UPN4 1083 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 PCDHB6Q9Y5E3 794 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 SYNGAP1Q96PV0 1343 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 DOCK3Q8IZD9 2030 aa12.79□□□□□ -0.36
TRAF4-206ENST00000454852 ZSWIM8A7E2V4 1837 aa12.78□□□□□ -0.36
TRAF4-206ENST00000454852 FAM86B1E9PN63 330 aa12.78□□□□□ -0.36
TRAF4-206ENST00000454852 BAG4O95429 457 aaKnown RBP12.78□□□□□ -0.36
TRAF4-206ENST00000454852 FAM86B2P0C5J1 330 aa12.78□□□□□ -0.36
TRAF4-206ENST00000454852 EIF2AK2P19525 551 aaKnown RBP12.78□□□□□ -0.36
TRAF4-206ENST00000454852 HOXD10P28358 340 aa12.78□□□□□ -0.36
TRAF4-206ENST00000454852 ICAM3P32942 547 aa12.78□□□□□ -0.36
TRAF4-206ENST00000454852 PRPHP41219 470 aa12.78□□□□□ -0.36
TRAF4-206ENST00000454852 ATP2C1P98194 919 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-206ENST00000454852 CAP1Q01518 475 aa12.78□□□□□ -0.36
TRAF4-206ENST00000454852 SF3A1Q15459 793 aaKnown RBP12.78□□□□□ -0.36
TRAF4-206ENST00000454852 ARL6IP4Q66PJ3 421 aaKnown RBP12.78□□□□□ -0.36
TRAF4-206ENST00000454852 DPP9Q86TI2 863 aa12.78□□□□□ -0.36
TRAF4-206ENST00000454852 TRMT44Q8IYL2 757 aaKnown RBP12.78□□□□□ -0.36
TRAF4-206ENST00000454852 TMEM87AQ8NBN3 555 aa12.78□□□□□ -0.36
TRAF4-206ENST00000454852 LINC00301Q8NCQ3 95 aa12.78□□□□□ -0.36
TRAF4-206ENST00000454852 ZNF296Q8WUU4 475 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-206ENST00000454852 GPRASP2Q96D09 838 aa12.78□□□□□ -0.36
TRAF4-206ENST00000454852 MTMR9Q96QG7 549 aa12.78□□□□□ -0.36
TRAF4-206ENST00000454852 KCNMB3Q9NPA1 279 aa12.78□□□□□ -0.36
TRAF4-206ENST00000454852 JADE2Q9NQC1 790 aa12.78□□□□□ -0.36
TRAF4-206ENST00000454852 ELP1O95163 1332 aa12.78□□□□□ -0.36
TRAF4-206ENST00000454852 NEMFO60524 1076 aa12.77□□□□□ -0.37
TRAF4-206ENST00000454852 CCNT1O60563 726 aaKnown RBP12.77□□□□□ -0.37
TRAF4-206ENST00000454852 PPP6R2O75170 966 aa12.77□□□□□ -0.37
TRAF4-206ENST00000454852 TDP2O95551 362 aa12.77□□□□□ -0.37
TRAF4-206ENST00000454852 ITGB5P18084 799 aa12.77□□□□□ -0.37
TRAF4-206ENST00000454852 NPLOC4Q8TAT6 608 aa12.77□□□□□ -0.37
TRAF4-206ENST00000454852 CDHR1Q96JP9 859 aa12.77□□□□□ -0.37
TRAF4-206ENST00000454852 FAM20AQ96MK3 541 aa12.77□□□□□ -0.37
TRAF4-206ENST00000454852 TINF2Q9BSI4 451 aa12.77□□□□□ -0.37
TRAF4-206ENST00000454852 KATNBL1Q9H079 304 aa12.77□□□□□ -0.37
TRAF4-206ENST00000454852 SRRDQ9UH36 339 aa12.77□□□□□ -0.37
TRAF4-206ENST00000454852 DDX25Q9UHL0 483 aaKnown RBP12.77□□□□□ -0.37
TRAF4-206ENST00000454852 NRBP1Q9UHY1 535 aa12.77□□□□□ -0.37
TRAF4-206ENST00000454852 CLIC4Q9Y696 253 aa12.77□□□□□ -0.37
TRAF4-206ENST00000454852 KIAA1217Q5T5P2 1943 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 RBM47A0AV96 593 aaKnown RBP12.76□□□□□ -0.37
TRAF4-206ENST00000454852 SPATA31C2B4DYI2 1134 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 SLC37A4O43826 429 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 RGS20O76081 388 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 SNAI1O95863 264 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-206ENST00000454852 TGFB3P10600 412 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 FLT3LGP49771 235 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 UBXN2AP68543 259 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 PDE4DQ08499 809 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 NBR1Q14596 966 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 ZNF174Q15697 407 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 GNPTABQ3T906 1256 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 KCNV1Q6PIU1 500 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 ARMCX2Q7L311 632 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 NLRX1Q86UT6 975 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 ETNPPLQ8TBG4 499 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 CD99L2Q8TCZ2 262 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 KCNG4Q8TDN1 519 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 LEO1Q8WVC0 666 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-206ENST00000454852 GBP4Q96PP9 640 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 VTA1Q9NP79 307 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 TCHHQ07283 1943 aa12.76□□□□□ -0.37
TRAF4-206ENST00000454852 MSH4O15457 936 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 FIBPO43427 364 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 OR52Z1P0C646 297 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 MYCLP12524 364 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-206ENST00000454852 ATP2B1P20020 1258 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 MCM7P33993 719 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 ZNF76P36508 570 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 PRKCZQ05513 592 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 PTGDRQ13258 359 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 CSPP1Q1MSJ5 1256 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 PRR16Q569H4 304 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 PLA2G4DQ86XP0 818 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 POTEDQ86YR6 584 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 SLFN12Q8IYM2 578 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 CYP2W1Q8TAV3 490 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 PXYLP1Q8TE99 480 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms