RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 CUL5Q93034 780 aa13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 JAKMIP2Q96AA8 810 aa13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 PNKPQ96T60 521 aa13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 NT5C3AQ9H0P0 336 aa13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 DDX4Q9NQI0 724 aaKnown RBP13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 ST7Q9NRC1 585 aa13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 AGPAT5Q9NUQ2 364 aa13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 PUF60Q9UHX1 559 aaKnown RBP13.94□□□□□ -0.18
ECHDC1-209ENST00000454591 IPO7O95373 1038 aaKnown RBP13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 USP11P51784 963 aa13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 USP14P54578 494 aa13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 GTF2IP78347 998 aa13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 DPP8Q6V1X1 898 aaPredicted RBP13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 ADGRF4Q8IZF3 695 aa13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 CERS5Q8N5B7 392 aa13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 SYN2Q92777 582 aaPredicted RBP13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 HAS1Q92839 578 aa13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 COA7Q96BR5 231 aa13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 DNAJC19Q96DA6 116 aa13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 CDK5RAP3Q96JB5 506 aa13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 CEP63Q96MT8 703 aa13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 NDST4Q9H3R1 872 aa13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 GUCA1BQ9UMX6 200 aa13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 SAR1BQ9Y6B6 198 aa13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 KIF13BQ9NQT8 1826 aa13.93□□□□□ -0.18
ECHDC1-209ENST00000454591 ADAMTSL1Q8N6G6 1762 aa13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 CCDC66A2RUB6 948 aa13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 C6orf229H3BNL8 230 aa13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 PJA2O43164 708 aa13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 PPP1R11O60927 126 aaPredicted RBP13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 TDP2O95551 362 aa13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 OAS2P29728 719 aaKnown RBP13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 HDLBPQ00341 1268 aaKnown RBP13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 SNX29Q8TEQ0 813 aa13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 DCAF4Q8WV16 495 aa13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 TSG101Q99816 390 aa13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 NUCKS1Q9H1E3 243 aaKnown RBP13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 VIPAS39Q9H9C1 493 aa13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 VAT1LQ9HCJ6 419 aa13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 NYAP2Q9P242 653 aa13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 MTMR7Q9Y216 660 aa13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 COL11A2P13942 1736 aaPredicted RBP13.92□□□□□ -0.18
ECHDC1-209ENST00000454591 SSU72P8A0A1W2PR75 194 aa13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 FRMD3A2A2Y4 597 aa13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 EIF3JO75822 258 aaKnown RBP13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 HLA-DOAP06340 250 aa13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 GPS2Q13227 327 aa13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 FAM182BQ5T319 152 aa13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 KIAA1328Q86T90 577 aa13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 TXLNBQ8N3L3 684 aa13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 KCTD17Q8N5Z5 321 aa13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 TRIM58Q8NG06 486 aa13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 CRYGNQ8WXF5 182 aa13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 DDX12PQ92771 950 aa13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 EXOC4Q96A65 974 aa13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 SLC39A2Q9NP94 309 aa13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 KCNMB3Q9NPA1 279 aa13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 ZHX1Q9UKY1 873 aaPredicted RBP13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 COL2A1P02458 1487 aaPredicted RBP13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 FRMPD2Q68DX3 1309 aaPredicted RBP13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 PITPNM2Q9BZ72 1349 aa13.91□□□□□ -0.18
ECHDC1-209ENST00000454591 RCCD1A6NED2 376 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 UBAP1LF5GYI3 381 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 RBAK-RBAKDNI3L0D1 243 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 TBX3O15119 743 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 GNA14O95837 355 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 NPR1P16066 1061 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 MMP14P50281 582 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 VSNL1P62760 191 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 AP3B2Q13367 1082 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 ASTE1Q2TB18 679 aaPredicted RBP13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 SEPT12Q8IYM1 358 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 LRRC47Q8N1G4 583 aaKnown RBP13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 BAP1Q92560 729 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 LACRTQ9GZZ8 138 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 DHX36Q9H2U1 1008 aaKnown RBP13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 ABCB6Q9NP58 842 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 USP40Q9NVE5 1235 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 TRIM10Q9UDY6 481 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 DDX25Q9UHL0 483 aaKnown RBP13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 TRPC5Q9UL62 973 aaPredicted RBP13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 STK24Q9Y6E0 443 aa13.9□□□□□ -0.18
ECHDC1-209ENST00000454591 POTEMA6NI47 508 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 PES1O00541 588 aaKnown RBP13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 ZNF263O14978 683 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 USO1O60763 962 aaKnown RBP13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 ATP1A1P05023 1023 aaKnown RBP13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 KLK7P49862 253 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 KIF5AQ12840 1032 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 COASYQ13057 564 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 SPA17Q15506 151 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 APOBEC3HQ6NTF7 200 aaKnown RBP13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 CDC42EP5Q6NZY7 148 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 KCNK18Q7Z418 384 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 MYOCDQ8IZQ8 938 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 CCDC155Q8N6L0 562 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 NOA1Q8NC60 698 aaKnown RBP13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 TEKT1Q969V4 418 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 CCDC42Q96M95 316 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms