RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 SEC63Q9UGP8 760 aaKnown RBP16.83■□□□□ 0.28
HSPG2-207ENST00000453796 TBX21Q9UL17 535 aa16.83■□□□□ 0.28
HSPG2-207ENST00000453796 MEIS2O14770 477 aa16.82■□□□□ 0.28
HSPG2-207ENST00000453796 ZBTB43O43298 467 aa16.82■□□□□ 0.28
HSPG2-207ENST00000453796 RCAN1P53805 252 aa16.82■□□□□ 0.28
HSPG2-207ENST00000453796 ARHGAP1Q07960 439 aa16.82■□□□□ 0.28
HSPG2-207ENST00000453796 SYNE3Q6ZMZ3 975 aa16.82■□□□□ 0.28
HSPG2-207ENST00000453796 FCHSD1Q86WN1 690 aa16.82■□□□□ 0.28
HSPG2-207ENST00000453796 CCDC82Q8N4S0 544 aa16.82■□□□□ 0.28
HSPG2-207ENST00000453796 USP26Q9BXU7 913 aa16.82■□□□□ 0.28
HSPG2-207ENST00000453796 SEZ6LQ9BYH1 1024 aa16.82■□□□□ 0.28
HSPG2-207ENST00000453796 TMEM39AQ9NV64 488 aa16.82■□□□□ 0.28
HSPG2-207ENST00000453796 RBM28Q9NW13 759 aaKnown RBP16.82■□□□□ 0.28
HSPG2-207ENST00000453796 DDX41Q9UJV9 622 aaKnown RBP16.82■□□□□ 0.28
HSPG2-207ENST00000453796 NID2Q14112 1375 aa16.81■□□□□ 0.28
HSPG2-207ENST00000453796 KLF18A0A0U1RQI7 1052 aa16.81■□□□□ 0.28
HSPG2-207ENST00000453796 hCG_1642624A0A1W2PR95 340 aa16.81■□□□□ 0.28
HSPG2-207ENST00000453796 PIK3CDO00329 1044 aa16.81■□□□□ 0.28
HSPG2-207ENST00000453796 CDC27P30260 824 aa16.81■□□□□ 0.28
HSPG2-207ENST00000453796 PSMC6P62333 389 aa16.81■□□□□ 0.28
HSPG2-207ENST00000453796 RTN1Q16799 776 aa16.81■□□□□ 0.28
HSPG2-207ENST00000453796 LRIT3Q3SXY7 679 aa16.81■□□□□ 0.28
HSPG2-207ENST00000453796 BLOC1S2Q6QNY1 142 aa16.81■□□□□ 0.28
HSPG2-207ENST00000453796 Q6ZUG5 572 aa16.81■□□□□ 0.28
HSPG2-207ENST00000453796 LAMA2P24043 3122 aaKnown RBP16.81■□□□□ 0.28
HSPG2-207ENST00000453796 GH1P01241 217 aa16.8■□□□□ 0.28
HSPG2-207ENST00000453796 MYCLP12524 364 aaPredicted RBP16.8■□□□□ 0.28
HSPG2-207ENST00000453796 RPS6KB1P23443 525 aa16.8■□□□□ 0.28
HSPG2-207ENST00000453796 MRPS9P82933 396 aaKnown RBP16.8■□□□□ 0.28
HSPG2-207ENST00000453796 USP17L6PQ6QN14 398 aa16.8■□□□□ 0.28
HSPG2-207ENST00000453796 EMID1Q96A84 441 aaPredicted RBP16.8■□□□□ 0.28
HSPG2-207ENST00000453796 GOLGA8AA7E2F4 631 aa16.79■□□□□ 0.28
HSPG2-207ENST00000453796 GOLGA8BA8MQT2 603 aa16.79■□□□□ 0.28
HSPG2-207ENST00000453796 TLR3O15455 904 aaKnown RBP16.79■□□□□ 0.28
HSPG2-207ENST00000453796 KPNA6O60684 536 aa16.79■□□□□ 0.28
HSPG2-207ENST00000453796 TIMP1P01033 207 aa16.79■□□□□ 0.28
HSPG2-207ENST00000453796 MMP3P08254 477 aa16.79■□□□□ 0.28
HSPG2-207ENST00000453796 MYL3P08590 195 aa16.79■□□□□ 0.28
HSPG2-207ENST00000453796 RAG1P15918 1043 aa16.79■□□□□ 0.28
HSPG2-207ENST00000453796 CCND2P30279 289 aa16.79■□□□□ 0.28
HSPG2-207ENST00000453796 APOBRQ0VD83 1088 aa16.79■□□□□ 0.28
HSPG2-207ENST00000453796 AFG1LQ8WV93 481 aa16.79■□□□□ 0.28
HSPG2-207ENST00000453796 BRF1Q92994 677 aa16.79■□□□□ 0.28
HSPG2-207ENST00000453796 LRCH3Q96II8 777 aa16.79■□□□□ 0.28
HSPG2-207ENST00000453796 MTG1Q9BT17 334 aaPredicted RBP16.79■□□□□ 0.28
HSPG2-207ENST00000453796 MRVI1Q9Y6F6 885 aa16.79■□□□□ 0.28
HSPG2-207ENST00000453796 B4GALT4O60513 344 aa16.78■□□□□ 0.28
HSPG2-207ENST00000453796 CASTP20810 708 aaKnown RBP16.78■□□□□ 0.28
HSPG2-207ENST00000453796 PSMA5P28066 241 aa16.78■□□□□ 0.28
HSPG2-207ENST00000453796 BRDTQ58F21 947 aaPredicted RBP16.78■□□□□ 0.28
HSPG2-207ENST00000453796 WWC2Q6AWC2 1192 aa16.78■□□□□ 0.28
HSPG2-207ENST00000453796 TYW1BQ6NUM6 668 aa16.78■□□□□ 0.28
HSPG2-207ENST00000453796 KCNV1Q6PIU1 500 aa16.78■□□□□ 0.28
HSPG2-207ENST00000453796 SMARCC2Q8TAQ2 1214 aa16.78■□□□□ 0.28
HSPG2-207ENST00000453796 GPKOWQ92917 476 aaPredicted RBP eCLIP16.78■□□□□ 0.28
HSPG2-207ENST00000453796 CUL5Q93034 780 aa16.78■□□□□ 0.28
HSPG2-207ENST00000453796 ZFP91Q96JP5 570 aaPredicted RBP16.78■□□□□ 0.28
HSPG2-207ENST00000453796 INPP4AQ96PE3 977 aaPredicted RBP16.78■□□□□ 0.28
HSPG2-207ENST00000453796 ZSWIM6Q9HCJ5 1215 aa16.78■□□□□ 0.28
HSPG2-207ENST00000453796 STAM2O75886 525 aa16.77■□□□□ 0.28
HSPG2-207ENST00000453796 TGFB3P10600 412 aa16.77■□□□□ 0.28
HSPG2-207ENST00000453796 HOXD8P13378 290 aaPredicted RBP16.77■□□□□ 0.28
HSPG2-207ENST00000453796 ICAM3P32942 547 aa16.77■□□□□ 0.28
HSPG2-207ENST00000453796 ADD1P35611 737 aaKnown RBP16.77■□□□□ 0.28
HSPG2-207ENST00000453796 EPHB4P54760 987 aa16.77■□□□□ 0.28
HSPG2-207ENST00000453796 EVCP57679 992 aa16.77■□□□□ 0.28
HSPG2-207ENST00000453796 SP2Q02086 613 aa16.77■□□□□ 0.28
HSPG2-207ENST00000453796 SEMA3FQ13275 785 aa16.77■□□□□ 0.28
HSPG2-207ENST00000453796 SHHQ15465 462 aa16.77■□□□□ 0.28
HSPG2-207ENST00000453796 NBPF20Q3BBV1 942 aa16.77■□□□□ 0.28
HSPG2-207ENST00000453796 C9orf50Q5SZB4 431 aa16.77■□□□□ 0.28
HSPG2-207ENST00000453796 MYSM1Q5VVJ2 828 aa16.77■□□□□ 0.28
HSPG2-207ENST00000453796 PCNX4Q63HM2 1172 aa16.77■□□□□ 0.28
HSPG2-207ENST00000453796 MFSD5Q6N075 450 aa16.77■□□□□ 0.28
HSPG2-207ENST00000453796 TRPV6Q9H1D0 765 aa16.77■□□□□ 0.28
HSPG2-207ENST00000453796 ALDH8A1Q9H2A2 487 aaPredicted RBP16.77■□□□□ 0.28
HSPG2-207ENST00000453796 PSTPIP2Q9H939 334 aa16.77■□□□□ 0.28
HSPG2-207ENST00000453796 TRIP12Q14669 1992 aaPredicted RBP16.77■□□□□ 0.27
HSPG2-207ENST00000453796 TANC1Q9C0D5 1861 aa16.76■□□□□ 0.27
HSPG2-207ENST00000453796 UBA1P22314 1058 aaKnown RBP16.76■□□□□ 0.27
HSPG2-207ENST00000453796 METAP2P50579 478 aaKnown RBP eCLIP16.76■□□□□ 0.271e-7■■■□□ 16.8
HSPG2-207ENST00000453796 FGD1P98174 961 aa16.76■□□□□ 0.27
HSPG2-207ENST00000453796 FPGSQ05932 587 aa16.76■□□□□ 0.27
HSPG2-207ENST00000453796 LAMC2Q13753 1193 aa16.76■□□□□ 0.27
HSPG2-207ENST00000453796 UBE2SQ16763 222 aa16.76■□□□□ 0.27
HSPG2-207ENST00000453796 CELF3Q5SZQ8 465 aaKnown RBP16.76■□□□□ 0.27
HSPG2-207ENST00000453796 NFRKBQ6P4R8 1299 aa16.76■□□□□ 0.27
HSPG2-207ENST00000453796 RUFY3Q7L099 469 aa16.76■□□□□ 0.27
HSPG2-207ENST00000453796 HEATR3Q7Z4Q2 680 aa16.76■□□□□ 0.27
HSPG2-207ENST00000453796 DHX37Q8IY37 1157 aaKnown RBP16.76■□□□□ 0.27
HSPG2-207ENST00000453796 PPTC7Q8NI37 304 aa16.76■□□□□ 0.27
HSPG2-207ENST00000453796 KAT2BQ92831 832 aa16.76■□□□□ 0.27
HSPG2-207ENST00000453796 TM6SF1Q9BZW5 370 aa16.76■□□□□ 0.27
HSPG2-207ENST00000453796 V9GY48 417 aaPredicted RBP16.76■□□□□ 0.27
HSPG2-207ENST00000453796 SCN5AQ14524 2016 aa16.75■□□□□ 0.27
HSPG2-207ENST00000453796 hCG_1984214I3L0E3 225 aa16.75■□□□□ 0.27
HSPG2-207ENST00000453796 STXBP3O00186 592 aa16.75■□□□□ 0.27
HSPG2-207ENST00000453796 TOB2Q14106 344 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-207ENST00000453796 GPR153Q6NV75 609 aa16.75■□□□□ 0.27
HSPG2-207ENST00000453796 PPP1R18Q6NYC8 613 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms