RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 ABCB11O95342 1321 aa10.34□□□□□ -0.75
DEPDC1B-202ENST00000453022 NLRC5Q86WI3 1866 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 B4DLN1 442 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 ZNF213O14771 459 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 OPLAHO14841 1288 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 BMP1P13497 986 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 KCNQ1P51787 676 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 MRPL12P52815 198 aaKnown RBP10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 MFAP1P55081 439 aaKnown RBP10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 CHMP4BP1P59074 171 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 BFSP2Q13515 415 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 PTGISQ16647 500 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 QRICH1Q2TAL8 776 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 ASPRV1Q53RT3 343 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 B4GALNT3Q6L9W6 998 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 PLEKHM2Q8IWE5 1019 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 RETREG2Q8NC44 543 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 PHOSPHO2Q8TCD6 241 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 ANKS1AQ92625 1134 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 ZSCAN10Q96SZ4 725 aaPredicted RBP10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 FTOQ9C0B1 505 aaKnown RBP eCLIP10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 MAF1Q9H063 256 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 OSBPL3Q9H4L5 887 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 RAPGEFL1Q9UHV5 662 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 NOD1Q9Y239 953 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 ATG2AQ2TAZ0 1938 aa10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 BAZ2BQ9UIF8 2168 aaKnown RBP10.33□□□□□ -0.76
DEPDC1B-202ENST00000453022 LCHNA4D1U4 455 aa10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 BAIAP3O94812 1187 aa10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 GH1P01241 217 aa10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 COL9A1P20849 921 aa10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 TCTN1Q2MV58 587 aa10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 CWC27Q6UX04 472 aaKnown RBP10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 CHST3Q7LGC8 479 aa10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 TMCO2Q7Z6W1 182 aaPredicted RBP10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 IQCA1Q86XH1 822 aa10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 CAGE1Q8TC20 777 aa10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 NSUN6Q8TEA1 469 aaKnown RBP10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 AFAP1L1Q8TED9 768 aa10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 RMDN3Q96TC7 470 aa10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 KAT14Q9H8E8 782 aa10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 JMJD4Q9H9V9 463 aa10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 ZSWIM5Q9P217 1185 aa10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 C5orf42Q9H799 3197 aa10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 BRWD1Q9NSI6 2320 aa10.32□□□□□ -0.76
DEPDC1B-202ENST00000453022 LPXNO60711 386 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 EIF2AK2P19525 551 aaKnown RBP10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 NT5C2P49902 561 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 WDR5P61964 334 aaKnown RBP10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 RBL2Q08999 1139 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 STXBP2Q15833 593 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 LRRC8DQ7L1W4 858 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 CHD1LQ86WJ1 897 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 ARNTL2Q8WYA1 636 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 EMID1Q96A84 441 aaPredicted RBP10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 IWS1Q96ST2 819 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 IL25Q9H293 177 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 TSPYL2Q9H2G4 693 aaPredicted RBP10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 PXMP2Q9NR77 195 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 GTF2IRD1Q9UHL9 959 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 DDX41Q9UJV9 622 aaKnown RBP10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 HAS3O00219 553 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 PPP1R11O60927 126 aaPredicted RBP10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 NBNO60934 754 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 RGS20O76081 388 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 F2P00734 622 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 IGHDP01880 384 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 PARP1P09874 1014 aaKnown RBP10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 ZNF286BP0CG31 522 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 CKBP12277 381 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 SELPP16109 830 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 HSD17B4P51659 736 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 DEFB103AP81534 67 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 GHRHRQ02643 423 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 NUCB1Q02818 461 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 GRB10Q13322 594 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 CCDC178Q5BJE1 867 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 TRAF7Q6Q0C0 670 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 POTEHQ6S545 545 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 FBXO11Q86XK2 927 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 MCF2L2Q86YR7 1114 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 STAG2Q8N3U4 1231 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 CCDC155Q8N6L0 562 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 IL27Q8NEV9 243 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 WNT8BQ93098 351 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 DSCC1Q9BVC3 393 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 VAT1LQ9HCJ6 419 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 DIAPH3Q9NSV4 1193 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 HDAC6Q9UBN7 1215 aa10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 MRPL11Q9Y3B7 192 aaKnown RBP10.31□□□□□ -0.76
DEPDC1B-202ENST00000453022 GTPBP6O43824 516 aaPredicted RBP10.3□□□□□ -0.76
DEPDC1B-202ENST00000453022 TLL1O43897 1013 aa10.3□□□□□ -0.76
DEPDC1B-202ENST00000453022 DHX16O60231 1041 aaKnown RBP10.3□□□□□ -0.76
DEPDC1B-202ENST00000453022 EIF3JO75822 258 aaKnown RBP10.3□□□□□ -0.76
DEPDC1B-202ENST00000453022 CFBP00751 764 aa10.3□□□□□ -0.76
DEPDC1B-202ENST00000453022 CXCL10P02778 98 aa10.3□□□□□ -0.76
DEPDC1B-202ENST00000453022 NR3C2P08235 984 aa10.3□□□□□ -0.76
DEPDC1B-202ENST00000453022 CASTP20810 708 aaKnown RBP10.3□□□□□ -0.76
DEPDC1B-202ENST00000453022 PSEN2P49810 448 aa10.3□□□□□ -0.76
DEPDC1B-202ENST00000453022 HIC1Q14526 733 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms