RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 CLEC4GQ6UXB4 293 aa13.95□□□□□ -0.18
THUMPD3-206ENST00000452837 SH3GL2Q99962 352 aa13.95□□□□□ -0.18
THUMPD3-206ENST00000452837 MAGEF1Q9HAY2 307 aa13.95□□□□□ -0.18
THUMPD3-206ENST00000452837 FAM153AQ9UHL3 310 aa13.95□□□□□ -0.18
THUMPD3-206ENST00000452837 CASZ1Q86V15 1759 aa13.94□□□□□ -0.18
THUMPD3-206ENST00000452837 TLR2O60603 784 aa13.94□□□□□ -0.18
THUMPD3-206ENST00000452837 GLI1P08151 1106 aa13.94□□□□□ -0.18
THUMPD3-206ENST00000452837 PTF1AQ7RTS3 328 aa13.94□□□□□ -0.18
THUMPD3-206ENST00000452837 KRT25Q7Z3Z0 450 aa13.94□□□□□ -0.18
THUMPD3-206ENST00000452837 HYOU1Q9Y4L1 999 aa13.94□□□□□ -0.18
THUMPD3-206ENST00000452837 KCTD16Q68DU8 428 aa13.94□□□□□ -0.18
THUMPD3-206ENST00000452837 SV2BQ7L1I2 683 aa13.94□□□□□ -0.18
THUMPD3-206ENST00000452837 CCDC47Q96A33 483 aaKnown RBP13.94□□□□□ -0.18
THUMPD3-206ENST00000452837 MTMR9Q96QG7 549 aa13.94□□□□□ -0.18
THUMPD3-206ENST00000452837 STIM2Q9P246 746 aa13.94□□□□□ -0.18
THUMPD3-206ENST00000452837 PACSIN2Q9UNF0 486 aaPredicted RBP13.94□□□□□ -0.18
THUMPD3-206ENST00000452837 MYH1P12882 1939 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 TM4SF1P30408 202 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 CARSP49589 748 aaKnown RBP13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 GNGT1P63211 74 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 MAN2A1Q16706 1144 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 SLC10A5Q5PT55 438 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 PDXDC1Q6P996 788 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 UNC13DQ70J99 1090 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 COA7Q96BR5 231 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 SNED1Q8TER0 1413 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 USP17L5A8MUK1 530 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 KRT14P02533 472 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 LDHBP07195 334 aaKnown RBP13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 PRLRP16471 622 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 RNASE9P60153 205 aaKnown RBP13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 TTC31Q49AM3 519 aaPredicted RBP13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 IQCEQ6IPM2 695 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 ZIM3Q96PE6 472 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 SPZ1Q9BXG8 430 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 CAPS2Q9BXY5 557 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 SAMM50Q9Y512 469 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 ROBO3Q96MS0 1386 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 NOL4O94818 638 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 FTCDO95954 541 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 SEMA3FQ13275 785 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 COBLL1Q53SF7 1204 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 CCDC181Q5TID7 509 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 AMIGO3Q86WK7 504 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 DNAAF5Q86Y56 855 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 BCAS4Q8TDM0 211 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 LARP4BQ92615 738 aaKnown RBP13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 CALML4Q96GE6 196 aa13.93□□□□□ -0.18
THUMPD3-206ENST00000452837 FRMPD2Q68DX3 1309 aaPredicted RBP13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 TCP1P17987 556 aaKnown RBP13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 CDK8P49336 464 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 AMPD3Q01432 767 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 ITIH3Q06033 890 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 PPFIA1Q13136 1202 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 DDX12PQ92771 950 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 CEP95Q96GE4 821 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 NLRP3Q96P20 1036 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 EYA3Q99504 573 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 C6orf50Q9HD87 102 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 EIF3HO15372 352 aaKnown RBP eCLIP13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 PJA2O43164 708 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 ATP1A2P50993 1020 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 NAP1L1P55209 391 aaKnown RBP13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 PPARDQ03181 441 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 PDCLQ13371 301 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 ENOX2Q16206 610 aaKnown RBP13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 CALCRLQ16602 461 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 TDRD12Q587J7 1177 aaKnown RBP13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 KAT2BQ92831 832 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 PACSIN1Q9BY11 444 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 TANGO6Q9C0B7 1094 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 TBC1D7Q9P0N9 293 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 NFU1Q9UMS0 254 aa13.92□□□□□ -0.18
THUMPD3-206ENST00000452837 LIG3P49916 1009 aa13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 EPHB4P54760 987 aa13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 NFIXQ14938 502 aa13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 CCDC70Q6NSX1 233 aa13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 C8orf74Q6P047 294 aa13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 CLEC10AQ8IUN9 316 aa13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 REXO1Q8N1G1 1221 aaKnown RBP13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 GUF1Q8N442 669 aaKnown RBP13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 ALS2CR12Q96Q35 445 aa13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 SPATA31A1Q5TZJ5 1347 aa13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 PALMO75781 387 aa13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 CACNB1Q02641 598 aaPredicted RBP13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 EHHADHQ08426 723 aa13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 CACNA2D4Q7Z3S7 1137 aa13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 NBPF5PQ86XG9 351 aaPredicted RBP13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 RAD54LQ92698 747 aa13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 ANKRD2Q9GZV1 360 aa13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 FAM169AQ9Y6X4 670 aa13.91□□□□□ -0.18
THUMPD3-206ENST00000452837 COL14A1Q05707 1796 aaKnown RBP13.9□□□□□ -0.18
THUMPD3-206ENST00000452837 COL16A1Q07092 1604 aaPredicted RBP13.9□□□□□ -0.18
THUMPD3-206ENST00000452837 KLRC1P26715 233 aa13.9□□□□□ -0.18
THUMPD3-206ENST00000452837 GNA11P29992 359 aa13.9□□□□□ -0.18
THUMPD3-206ENST00000452837 ARID5AQ03989 594 aa13.9□□□□□ -0.18
THUMPD3-206ENST00000452837 SOGA3Q5TF21 947 aa13.9□□□□□ -0.18
THUMPD3-206ENST00000452837 TADA2BQ86TJ2 420 aa13.9□□□□□ -0.18
THUMPD3-206ENST00000452837 MICALL1Q8N3F8 863 aa13.9□□□□□ -0.18
THUMPD3-206ENST00000452837 SNX29Q8TEQ0 813 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms