RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 USP11P51784 963 aa13.21□□□□□ -0.29
SCN9A-204ENST00000452182 GNL2Q13823 731 aaKnown RBP13.21□□□□□ -0.29
SCN9A-204ENST00000452182 PCNX4Q63HM2 1172 aa13.21□□□□□ -0.29
SCN9A-204ENST00000452182 VSIG10LQ86VR7 867 aa13.21□□□□□ -0.29
SCN9A-204ENST00000452182 TINF2Q9BSI4 451 aa13.21□□□□□ -0.29
SCN9A-204ENST00000452182 PRDM10Q9NQV6 1147 aa13.21□□□□□ -0.29
SCN9A-204ENST00000452182 STK25O00506 426 aa13.21□□□□□ -0.3
SCN9A-204ENST00000452182 EIF2AK2P19525 551 aaKnown RBP13.21□□□□□ -0.3
SCN9A-204ENST00000452182 ARHGAP4P98171 946 aa13.21□□□□□ -0.3
SCN9A-204ENST00000452182 EARS2Q5JPH6 523 aaKnown RBP13.21□□□□□ -0.3
SCN9A-204ENST00000452182 MCTP1Q6DN14 999 aa13.21□□□□□ -0.3
SCN9A-204ENST00000452182 PIK3AP1Q6ZUJ8 805 aa13.21□□□□□ -0.3
SCN9A-204ENST00000452182 BRAPQ7Z569 592 aa13.21□□□□□ -0.3
SCN9A-204ENST00000452182 CTU1Q7Z7A3 348 aaKnown RBP13.21□□□□□ -0.3
SCN9A-204ENST00000452182 RAET1EQ8TD07 263 aa13.21□□□□□ -0.3
SCN9A-204ENST00000452182 TBCKQ8TEA7 893 aa13.21□□□□□ -0.3
SCN9A-204ENST00000452182 PGBD1Q96JS3 809 aa13.21□□□□□ -0.3
SCN9A-204ENST00000452182 ZSCAN16Q9H4T2 348 aaPredicted RBP13.21□□□□□ -0.3
SCN9A-204ENST00000452182 PTPN22Q9Y2R2 807 aa13.21□□□□□ -0.3
SCN9A-204ENST00000452182 HTTP42858 3142 aa13.2□□□□□ -0.3
SCN9A-204ENST00000452182 EIF3JO75822 258 aaKnown RBP13.2□□□□□ -0.3
SCN9A-204ENST00000452182 BRD1O95696 1058 aa13.2□□□□□ -0.3
SCN9A-204ENST00000452182 ZSCAN22P10073 491 aaPredicted RBP13.2□□□□□ -0.3
SCN9A-204ENST00000452182 CCND2P30279 289 aa13.2□□□□□ -0.3
SCN9A-204ENST00000452182 CIITAP33076 1130 aa13.2□□□□□ -0.3
SCN9A-204ENST00000452182 TRAPPC10P48553 1259 aa13.2□□□□□ -0.3
SCN9A-204ENST00000452182 STXBP2Q15833 593 aa13.2□□□□□ -0.3
SCN9A-204ENST00000452182 PKN2Q16513 984 aaKnown RBP13.2□□□□□ -0.3
SCN9A-204ENST00000452182 MOXD1Q6UVY6 613 aa13.2□□□□□ -0.3
SCN9A-204ENST00000452182 ARMCX2Q7L311 632 aa13.2□□□□□ -0.3
SCN9A-204ENST00000452182 NEK8Q86SG6 692 aa13.2□□□□□ -0.3
SCN9A-204ENST00000452182 SLAIN1Q8ND83 568 aa13.2□□□□□ -0.3
SCN9A-204ENST00000452182 TRIB2Q92519 343 aa13.2□□□□□ -0.3
SCN9A-204ENST00000452182 FLRT1Q9NZU1 646 aa13.2□□□□□ -0.3
SCN9A-204ENST00000452182 MCM3APO60318 1980 aa13.19□□□□□ -0.3
SCN9A-204ENST00000452182 KIAA1217Q5T5P2 1943 aa13.19□□□□□ -0.3
SCN9A-204ENST00000452182 EDIL3O43854 480 aa13.19□□□□□ -0.3
SCN9A-204ENST00000452182 ADCY3O60266 1144 aa13.19□□□□□ -0.3
SCN9A-204ENST00000452182 SNAI1O95863 264 aaPredicted RBP13.19□□□□□ -0.3
SCN9A-204ENST00000452182 NUCB2P80303 420 aa13.19□□□□□ -0.3
SCN9A-204ENST00000452182 MRPS9P82933 396 aaKnown RBP13.19□□□□□ -0.3
SCN9A-204ENST00000452182 PDE4DQ08499 809 aa13.19□□□□□ -0.3
SCN9A-204ENST00000452182 PKP1Q13835 747 aa13.19□□□□□ -0.3
SCN9A-204ENST00000452182 CCL14Q16627 93 aa13.19□□□□□ -0.3
SCN9A-204ENST00000452182 INF2Q27J81 1249 aa13.19□□□□□ -0.3
SCN9A-204ENST00000452182 IL31RAQ8NI17 732 aa13.19□□□□□ -0.3
SCN9A-204ENST00000452182 NAP1L4Q99733 375 aaKnown RBP13.19□□□□□ -0.3
SCN9A-204ENST00000452182 NRBP1Q9UHY1 535 aa13.19□□□□□ -0.3
SCN9A-204ENST00000452182 CYP3A7-CYP3A51PA0A087WV96 503 aa13.18□□□□□ -0.3
SCN9A-204ENST00000452182 FAM205CA6NFA0 338 aa13.18□□□□□ -0.3
SCN9A-204ENST00000452182 CYP3A7P24462 503 aa13.18□□□□□ -0.3
SCN9A-204ENST00000452182 UBXN2AP68543 259 aa13.18□□□□□ -0.3
SCN9A-204ENST00000452182 RESTQ13127 1097 aa13.18□□□□□ -0.3
SCN9A-204ENST00000452182 RILPL1Q5EBL4 403 aa13.18□□□□□ -0.3
SCN9A-204ENST00000452182 PPP4R3AQ6IN85 833 aa13.18□□□□□ -0.3
SCN9A-204ENST00000452182 NIPA1Q7RTP0 329 aa13.18□□□□□ -0.3
SCN9A-204ENST00000452182 INPP4AQ96PE3 977 aaPredicted RBP13.18□□□□□ -0.3
SCN9A-204ENST00000452182 KATNBL1Q9H079 304 aa13.18□□□□□ -0.3
SCN9A-204ENST00000452182 ABHD16BQ9H3Z7 469 aa13.18□□□□□ -0.3
SCN9A-204ENST00000452182 VTA1Q9NP79 307 aa13.18□□□□□ -0.3
SCN9A-204ENST00000452182 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.18□□□□□ -0.3
SCN9A-204ENST00000452182 NOL7Q9UMY1 257 aaKnown RBP13.18□□□□□ -0.3
SCN9A-204ENST00000452182 ZDHHC9Q9Y397 364 aa13.18□□□□□ -0.3
SCN9A-204ENST00000452182 UBIAD1Q9Y5Z9 338 aa13.18□□□□□ -0.3
SCN9A-204ENST00000452182 PTCH2Q9Y6C5 1203 aa13.18□□□□□ -0.3
SCN9A-204ENST00000452182 MYH15Q9Y2K3 1946 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 MAFGO15525 162 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 F13A1P00488 732 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 HMGCRP04035 888 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 MYCLP12524 364 aaPredicted RBP13.17□□□□□ -0.3
SCN9A-204ENST00000452182 GCFC2P16383 781 aaKnown RBP13.17□□□□□ -0.3
SCN9A-204ENST00000452182 GRK4P32298 578 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 ORC2Q13416 577 aaPredicted RBP13.17□□□□□ -0.3
SCN9A-204ENST00000452182 GNPTABQ3T906 1256 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 CEP55Q53EZ4 464 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 MFSD14CQ5VZR4 134 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 FERMT3Q86UX7 667 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 MBOAT7Q96N66 472 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 MXRA8Q9BRK3 442 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 CNPY2Q9Y2B0 182 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 IGLV3-22A0A075B6J6 115 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 RBM47A0AV96 593 aaKnown RBP13.17□□□□□ -0.3
SCN9A-204ENST00000452182 MEIS1O00470 390 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 RGS20O76081 388 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 PRKAR2AP13861 404 aaKnown RBP13.17□□□□□ -0.3
SCN9A-204ENST00000452182 ITGB5P18084 799 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 ICAM3P32942 547 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 CYP2C19P33261 490 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 TOB1P50616 345 aaPredicted RBP13.17□□□□□ -0.3
SCN9A-204ENST00000452182 LETM2Q2VYF4 491 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 MAP3K21Q5TCX8 1036 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 MYSM1Q5VVJ2 828 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 FBXO46Q6PJ61 603 aaPredicted RBP13.17□□□□□ -0.3
SCN9A-204ENST00000452182 GPRASP2Q96D09 838 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 JADE2Q9NQC1 790 aa13.17□□□□□ -0.3
SCN9A-204ENST00000452182 FAM86B1E9PN63 330 aa13.16□□□□□ -0.3
SCN9A-204ENST00000452182 FAM86B2P0C5J1 330 aa13.16□□□□□ -0.3
SCN9A-204ENST00000452182 TGFB3P10600 412 aa13.16□□□□□ -0.3
SCN9A-204ENST00000452182 ELNP15502 786 aa13.16□□□□□ -0.3
SCN9A-204ENST00000452182 ZNF76P36508 570 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms