RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 MMP3P08254 477 aa14.45□□□□□ -0.1
CPSF4-208ENST00000452047 KIF5BP33176 963 aa14.45□□□□□ -0.1
CPSF4-208ENST00000452047 LIFRP42702 1097 aa14.45□□□□□ -0.1
CPSF4-208ENST00000452047 PGM5Q15124 567 aa14.45□□□□□ -0.1
CPSF4-208ENST00000452047 NBPF20Q3BBV1 942 aa14.45□□□□□ -0.1
CPSF4-208ENST00000452047 NFRKBQ6P4R8 1299 aa14.45□□□□□ -0.1
CPSF4-208ENST00000452047 PSRC1Q6PGN9 363 aaPredicted RBP14.45□□□□□ -0.1
CPSF4-208ENST00000452047 CTCFLQ8NI51 663 aaPredicted RBP14.45□□□□□ -0.1
CPSF4-208ENST00000452047 EMID1Q96A84 441 aaPredicted RBP14.45□□□□□ -0.1
CPSF4-208ENST00000452047 FAM161BQ96MY7 647 aa14.45□□□□□ -0.1
CPSF4-208ENST00000452047 TTYH1Q9H313 450 aaPredicted RBP14.45□□□□□ -0.1
CPSF4-208ENST00000452047 IL23AQ9NPF7 189 aa14.45□□□□□ -0.1
CPSF4-208ENST00000452047 SCN5AQ14524 2016 aa14.44□□□□□ -0.1
CPSF4-208ENST00000452047 GCOM1H8Y6P7 765 aaPredicted RBP14.44□□□□□ -0.1
CPSF4-208ENST00000452047 PLEKHA8P1O95397 391 aa14.44□□□□□ -0.1
CPSF4-208ENST00000452047 SUPT20HL2P0C7V6 817 aa14.44□□□□□ -0.1
CPSF4-208ENST00000452047 POLR2MP0CAP2 368 aa14.44□□□□□ -0.1
CPSF4-208ENST00000452047 ACRP10323 421 aa14.44□□□□□ -0.1
CPSF4-208ENST00000452047 SMARCA1P28370 1054 aa14.44□□□□□ -0.1
CPSF4-208ENST00000452047 ZNF365Q70YC5 407 aa14.44□□□□□ -0.1
CPSF4-208ENST00000452047 VSIG10LQ86VR7 867 aa14.44□□□□□ -0.1
CPSF4-208ENST00000452047 TMTC2Q8N394 836 aa14.44□□□□□ -0.1
CPSF4-208ENST00000452047 PPP1R13LQ8WUF5 828 aa14.44□□□□□ -0.1
CPSF4-208ENST00000452047 VWCEQ96DN2 955 aa14.44□□□□□ -0.1
CPSF4-208ENST00000452047 MRVI1Q9Y6F6 885 aa14.44□□□□□ -0.1
CPSF4-208ENST00000452047 GBF1Q92538 1859 aa14.44□□□□□ -0.1
CPSF4-208ENST00000452047 TMEM265A0A087WTH1 108 aa14.43□□□□□ -0.1
CPSF4-208ENST00000452047 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.43□□□□□ -0.1
CPSF4-208ENST00000452047 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.43□□□□□ -0.1
CPSF4-208ENST00000452047 CCDC69A6NI79 296 aa14.43□□□□□ -0.1
CPSF4-208ENST00000452047 CYP2C9P11712 490 aa14.43□□□□□ -0.1
CPSF4-208ENST00000452047 MYCLP12524 364 aaPredicted RBP14.43□□□□□ -0.1
CPSF4-208ENST00000452047 CCL23P55773 120 aa14.43□□□□□ -0.1
CPSF4-208ENST00000452047 PTPN11Q06124 597 aaPredicted RBP14.43□□□□□ -0.1
CPSF4-208ENST00000452047 FAM47CQ5HY64 1035 aa14.43□□□□□ -0.1
CPSF4-208ENST00000452047 SGMS1Q86VZ5 419 aa14.43□□□□□ -0.1
CPSF4-208ENST00000452047 SRBD1Q8N5C6 995 aaKnown RBP14.43□□□□□ -0.1
CPSF4-208ENST00000452047 PIBF1Q8WXW3 757 aa14.43□□□□□ -0.1
CPSF4-208ENST00000452047 KAT2BQ92831 832 aa14.43□□□□□ -0.1
CPSF4-208ENST00000452047 LZTS2Q9BRK4 669 aa14.43□□□□□ -0.1
CPSF4-208ENST00000452047 LRRC2Q9BYS8 371 aa14.43□□□□□ -0.1
CPSF4-208ENST00000452047 SEMA6BQ9H3T3 888 aa14.43□□□□□ -0.1
CPSF4-208ENST00000452047 CDC45O75419 566 aa14.42□□□□□ -0.1
CPSF4-208ENST00000452047 HOXD8P13378 290 aaPredicted RBP14.42□□□□□ -0.1
CPSF4-208ENST00000452047 RXRAP19793 462 aa14.42□□□□□ -0.1
CPSF4-208ENST00000452047 DNAJB2P25686 324 aa14.42□□□□□ -0.1
CPSF4-208ENST00000452047 CCND2P30279 289 aa14.42□□□□□ -0.1
CPSF4-208ENST00000452047 GNAQP50148 359 aa14.42□□□□□ -0.1
CPSF4-208ENST00000452047 RNF20Q5VTR2 975 aa14.42□□□□□ -0.1
CPSF4-208ENST00000452047 NFXL1Q6ZNB6 911 aa14.42□□□□□ -0.1
CPSF4-208ENST00000452047 FCHSD1Q86WN1 690 aa14.42□□□□□ -0.1
CPSF4-208ENST00000452047 PPTC7Q8NI37 304 aa14.42□□□□□ -0.1
CPSF4-208ENST00000452047 HERVK_113Q902F9 699 aa14.42□□□□□ -0.1
CPSF4-208ENST00000452047 RRP36Q96EU6 259 aaKnown RBP14.42□□□□□ -0.1
CPSF4-208ENST00000452047 SCLYQ96I15 445 aa14.42□□□□□ -0.1
CPSF4-208ENST00000452047 CTAGE1Q96RT6 745 aa14.42□□□□□ -0.1
CPSF4-208ENST00000452047 CXXC1Q9P0U4 656 aaPredicted RBP14.42□□□□□ -0.1
CPSF4-208ENST00000452047 DOCK5Q9H7D0 1870 aa14.42□□□□□ -0.1
CPSF4-208ENST00000452047 TRANK1O15050 2925 aa14.42□□□□□ -0.1
CPSF4-208ENST00000452047 PITPNM1O00562 1244 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 F2P00734 622 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 CALM1P0DP23 149 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 CALM2P0DP24 149 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 CALM3P0DP25 149 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 CASTP20810 708 aaKnown RBP14.41□□□□□ -0.1
CPSF4-208ENST00000452047 UBA1P22314 1058 aaKnown RBP14.41□□□□□ -0.1
CPSF4-208ENST00000452047 MRPS9P82933 396 aaKnown RBP14.41□□□□□ -0.1
CPSF4-208ENST00000452047 SP2Q02086 613 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 LAMC2Q13753 1193 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 DGKDQ16760 1214 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 TSGA10IPQ3SY00 556 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 CELF3Q5SZQ8 465 aaKnown RBP14.41□□□□□ -0.1
CPSF4-208ENST00000452047 MYSM1Q5VVJ2 828 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 KCNV1Q6PIU1 500 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 SESTD1Q86VW0 696 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 RAB11FIP4Q86YS3 637 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 DHX37Q8IY37 1157 aaKnown RBP14.41□□□□□ -0.1
CPSF4-208ENST00000452047 RASEFQ8IZ41 740 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 CMTR1Q8N1G2 835 aaKnown RBP14.41□□□□□ -0.1
CPSF4-208ENST00000452047 GPKOWQ92917 476 aaPredicted RBP eCLIP14.41□□□□□ -0.1
CPSF4-208ENST00000452047 CDX2Q99626 313 aaPredicted RBP14.41□□□□□ -0.1
CPSF4-208ENST00000452047 SEC63Q9UGP8 760 aaKnown RBP14.41□□□□□ -0.1
CPSF4-208ENST00000452047 SLC12A7Q9Y666 1083 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 TRIP12Q14669 1992 aaPredicted RBP14.41□□□□□ -0.1
CPSF4-208ENST00000452047 REV3LO60673 3130 aa14.41□□□□□ -0.1
CPSF4-208ENST00000452047 GRXCR1A8MXD5 290 aa14.4□□□□□ -0.1
CPSF4-208ENST00000452047 PIK3CDO00329 1044 aa14.4□□□□□ -0.1
CPSF4-208ENST00000452047 MEIS2O14770 477 aa14.4□□□□□ -0.1
CPSF4-208ENST00000452047 FGBP02675 491 aa14.4□□□□□ -0.1
CPSF4-208ENST00000452047 TGFB3P10600 412 aa14.4□□□□□ -0.1
CPSF4-208ENST00000452047 EXOSC10Q01780 885 aaKnown RBP14.4□□□□□ -0.1
CPSF4-208ENST00000452047 ADCK5Q3MIX3 580 aa14.4□□□□□ -0.1
CPSF4-208ENST00000452047 HSDL1Q3SXM5 330 aa14.4□□□□□ -0.1
CPSF4-208ENST00000452047 APOA5Q6Q788 366 aa14.4□□□□□ -0.1
CPSF4-208ENST00000452047 TMTC3Q6ZXV5 915 aa14.4□□□□□ -0.1
CPSF4-208ENST00000452047 MICU3Q86XE3 530 aa14.4□□□□□ -0.1
CPSF4-208ENST00000452047 FANCBQ8NB91 859 aa14.4□□□□□ -0.1
CPSF4-208ENST00000452047 ZFP91Q96JP5 570 aaPredicted RBP14.4□□□□□ -0.1
CPSF4-208ENST00000452047 INPP4AQ96PE3 977 aaPredicted RBP14.4□□□□□ -0.1
CPSF4-208ENST00000452047 NEK1Q96PY6 1258 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms