RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 YBX2Q9Y2T7 364 aaKnown RBP31.54■■■□□ 2.64
USP42-204ENST00000451154 TRIP12Q14669 1992 aaPredicted RBP31.53■■■□□ 2.64
USP42-204ENST00000451154 MYH7BA7E2Y1 1941 aa31.53■■■□□ 2.64
USP42-204ENST00000451154 E7EWF7 191 aa31.52■■■□□ 2.64
USP42-204ENST00000451154 GRM4Q14833 912 aa31.52■■■□□ 2.64
USP42-204ENST00000451154 HOMER1Q86YM7 354 aa31.52■■■□□ 2.64
USP42-204ENST00000451154 USP38Q8NB14 1042 aa31.52■■■□□ 2.64
USP42-204ENST00000451154 RETREG2Q8NC44 543 aa31.52■■■□□ 2.64
USP42-204ENST00000451154 NOD1Q9Y239 953 aa31.52■■■□□ 2.64
USP42-204ENST00000451154 SGSM2O43147 1006 aa31.51■■■□□ 2.63
USP42-204ENST00000451154 MYCLP12524 364 aaPredicted RBP31.51■■■□□ 2.63
USP42-204ENST00000451154 HOXA13P31271 388 aaPredicted RBP31.51■■■□□ 2.63
USP42-204ENST00000451154 KAT2BQ92831 832 aa31.51■■■□□ 2.63
USP42-204ENST00000451154 PIGSQ96S52 555 aa31.51■■■□□ 2.63
USP42-204ENST00000451154 GAS2L1Q99501 681 aaPredicted RBP31.51■■■□□ 2.63
USP42-204ENST00000451154 SLC28A3Q9HAS3 691 aa31.51■■■□□ 2.63
USP42-204ENST00000451154 ERICH2A1L162 156 aa31.5■■■□□ 2.63
USP42-204ENST00000451154 PFKMP08237 780 aa31.5■■■□□ 2.63
USP42-204ENST00000451154 IQCF3P0C7M6 154 aa31.5■■■□□ 2.63
USP42-204ENST00000451154 MYOGP15173 224 aa31.5■■■□□ 2.63
USP42-204ENST00000451154 CASTP20810 708 aaKnown RBP31.5■■■□□ 2.63
USP42-204ENST00000451154 GHRHRQ02643 423 aa31.5■■■□□ 2.63
USP42-204ENST00000451154 WTAPQ15007 396 aa31.5■■■□□ 2.63
USP42-204ENST00000451154 PTGISQ16647 500 aa31.5■■■□□ 2.63
USP42-204ENST00000451154 STOX1Q6ZVD7 989 aa31.5■■■□□ 2.63
USP42-204ENST00000451154 RALYLQ86SE5 291 aaKnown RBP31.5■■■□□ 2.63
USP42-204ENST00000451154 NCOA7Q8NI08 942 aa31.5■■■□□ 2.63
USP42-204ENST00000451154 RIOX1Q9H6W3 641 aa31.5■■■□□ 2.63
USP42-204ENST00000451154 MRVI1Q9Y6F6 885 aa31.5■■■□□ 2.63
USP42-204ENST00000451154 PPM1EQ8WY54 764 aa31.49■■■□□ 2.63
USP42-204ENST00000451154 PDCD2LQ9BRP1 358 aa31.49■■■□□ 2.63
USP42-204ENST00000451154 MAP3K20Q9NYL2 800 aaKnown RBP31.49■■■□□ 2.63
USP42-204ENST00000451154 TET1Q8NFU7 2136 aa31.48■■■□□ 2.63
USP42-204ENST00000451154 PITPNM1O00562 1244 aa31.48■■■□□ 2.63
USP42-204ENST00000451154 ATP2A2P16615 1042 aaKnown RBP31.48■■■□□ 2.63
USP42-204ENST00000451154 TROAPQ12815 778 aa31.48■■■□□ 2.63
USP42-204ENST00000451154 BFSP2Q13515 415 aa31.48■■■□□ 2.63
USP42-204ENST00000451154 DGKDQ16760 1214 aa31.48■■■□□ 2.63
USP42-204ENST00000451154 GDF6Q6KF10 455 aaPredicted RBP31.48■■■□□ 2.63
USP42-204ENST00000451154 CYTH3O43739 400 aa31.47■■■□□ 2.63
USP42-204ENST00000451154 RGS20O76081 388 aa31.47■■■□□ 2.63
USP42-204ENST00000451154 RFC2P35250 354 aa31.47■■■□□ 2.63
USP42-204ENST00000451154 LAMC2Q13753 1193 aa31.47■■■□□ 2.63
USP42-204ENST00000451154 ADGRE1Q14246 886 aa31.47■■■□□ 2.63
USP42-204ENST00000451154 SART3Q15020 963 aaKnown RBP31.47■■■□□ 2.63
USP42-204ENST00000451154 TMEM67Q5HYA8 995 aa31.47■■■□□ 2.63
USP42-204ENST00000451154 DHX37Q8IY37 1157 aaKnown RBP31.47■■■□□ 2.63
USP42-204ENST00000451154 MAP4K1Q92918 833 aa31.47■■■□□ 2.63
USP42-204ENST00000451154 ZFP91Q96JP5 570 aaPredicted RBP31.47■■■□□ 2.63
USP42-204ENST00000451154 CTAGE1Q96RT6 745 aa31.47■■■□□ 2.63
USP42-204ENST00000451154 FTOQ9C0B1 505 aaKnown RBP eCLIP31.47■■■□□ 2.63
USP42-204ENST00000451154 SORBS3O60504 671 aa31.46■■■□□ 2.63
USP42-204ENST00000451154 VSIG10LQ86VR7 867 aa31.46■■■□□ 2.63
USP42-204ENST00000451154 FCHSD1Q86WN1 690 aa31.46■■■□□ 2.63
USP42-204ENST00000451154 IL31RAQ8NI17 732 aa31.46■■■□□ 2.63
USP42-204ENST00000451154 IGDCC4Q8TDY8 1250 aa31.46■■■□□ 2.63
USP42-204ENST00000451154 EMID1Q96A84 441 aaPredicted RBP31.46■■■□□ 2.63
USP42-204ENST00000451154 PCDHA11Q9Y5I1 949 aa31.46■■■□□ 2.63
USP42-204ENST00000451154 PNMA6FA0A0J9YX94 578 aa31.45■■■□□ 2.63
USP42-204ENST00000451154 GCOM1H8Y6P7 765 aaPredicted RBP31.45■■■□□ 2.63
USP42-204ENST00000451154 POLR2MP0CAP2 368 aa31.45■■■□□ 2.63
USP42-204ENST00000451154 ACTN1P12814 892 aa31.45■■■□□ 2.63
USP42-204ENST00000451154 IGFBP4P22692 258 aa31.45■■■□□ 2.63
USP42-204ENST00000451154 ANTXR2P58335 489 aa31.45■■■□□ 2.63
USP42-204ENST00000451154 PGM5Q15124 567 aa31.45■■■□□ 2.63
USP42-204ENST00000451154 CATIPQ7Z7H3 387 aa31.45■■■□□ 2.63
USP42-204ENST00000451154 SESTD1Q86VW0 696 aa31.45■■■□□ 2.63
USP42-204ENST00000451154 SAMD3Q8N6K7 520 aa31.45■■■□□ 2.63
USP42-204ENST00000451154 PIBF1Q8WXW3 757 aa31.45■■■□□ 2.63
USP42-204ENST00000451154 ALG1Q9BT22 464 aa31.45■■■□□ 2.63
USP42-204ENST00000451154 PRDM6Q9NQX0 595 aa31.45■■■□□ 2.63
USP42-204ENST00000451154 PSEN2P49810 448 aa31.44■■■□□ 2.62
USP42-204ENST00000451154 PPTC7Q8NI37 304 aa31.44■■■□□ 2.62
USP42-204ENST00000451154 HDAC6Q9UBN7 1215 aa31.44■■■□□ 2.62
USP42-204ENST00000451154 RBM8AQ9Y5S9 174 aaKnown RBP31.44■■■□□ 2.62
USP42-204ENST00000451154 TRAF1Q13077 416 aa31.43■■■□□ 2.62
USP42-204ENST00000451154 MB21D2Q8IYB1 491 aaPredicted RBP31.43■■■□□ 2.62
USP42-204ENST00000451154 SPTBN5Q9NRC6 3674 aaKnown RBP31.43■■■□□ 2.62
USP42-204ENST00000451154 ZNF286BP0CG31 522 aa31.42■■■□□ 2.62
USP42-204ENST00000451154 SP2Q02086 613 aa31.42■■■□□ 2.62
USP42-204ENST00000451154 CCDC85BQ15834 202 aaPredicted RBP31.42■■■□□ 2.62
USP42-204ENST00000451154 MYSM1Q5VVJ2 828 aa31.42■■■□□ 2.62
USP42-204ENST00000451154 PPP2R2DQ66LE6 453 aa31.42■■■□□ 2.62
USP42-204ENST00000451154 C7orf31Q8N865 590 aa31.42■■■□□ 2.62
USP42-204ENST00000451154 DHX38Q92620 1227 aaKnown RBP31.42■■■□□ 2.62
USP42-204ENST00000451154 GTF2IRD1Q9UHL9 959 aa31.42■■■□□ 2.62
USP42-204ENST00000451154 MFSD10Q14728 455 aa31.41■■■□□ 2.62
USP42-204ENST00000451154 CELF3Q5SZQ8 465 aaKnown RBP31.41■■■□□ 2.62
USP42-204ENST00000451154 KCNV1Q6PIU1 500 aa31.41■■■□□ 2.62
USP42-204ENST00000451154 CCDC155Q8N6L0 562 aa31.41■■■□□ 2.62
USP42-204ENST00000451154 CAGE1Q8TC20 777 aa31.41■■■□□ 2.62
USP42-204ENST00000451154 GPKOWQ92917 476 aaPredicted RBP eCLIP31.41■■■□□ 2.62
USP42-204ENST00000451154 TTC28Q96AY4 2481 aa31.41■■■□□ 2.62
USP42-204ENST00000451154 GGPS1O95749 300 aa31.4■■■□□ 2.62
USP42-204ENST00000451154 CCND2P30279 289 aa31.4■■■□□ 2.62
USP42-204ENST00000451154 GPNMBQ14956 572 aa31.4■■■□□ 2.62
USP42-204ENST00000451154 KIAA0753Q2KHM9 967 aa31.4■■■□□ 2.62
USP42-204ENST00000451154 SPATA33Q96N06 139 aa31.4■■■□□ 2.62
USP42-204ENST00000451154 PPFIA4O75335 1185 aa31.39■■■□□ 2.62
USP42-204ENST00000451154 HSDL1Q3SXM5 330 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms