RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 FRYLO94915 3013 aa9.57□□□□□ -0.88
LINC01961-201ENST00000449954 ANKRD11Q6UB99 2663 aaPredicted RBP9.57□□□□□ -0.88
LINC01961-201ENST00000449954 EP300Q09472 2414 aaPredicted RBP9.56□□□□□ -0.88
LINC01961-201ENST00000449954 LOC730098B7Z3J9 87 aa9.56□□□□□ -0.88
LINC01961-201ENST00000449954 H3BNC9 293 aa9.56□□□□□ -0.88
LINC01961-201ENST00000449954 UQCRFS1P1P0C7P4 283 aa9.56□□□□□ -0.88
LINC01961-201ENST00000449954 ICA1Q05084 483 aa9.56□□□□□ -0.88
LINC01961-201ENST00000449954 ST3GAL2Q16842 350 aa9.56□□□□□ -0.88
LINC01961-201ENST00000449954 EPC2Q52LR7 807 aa9.56□□□□□ -0.88
LINC01961-201ENST00000449954 SNRNP48Q6IEG0 339 aaKnown RBP9.56□□□□□ -0.88
LINC01961-201ENST00000449954 FRMD5Q7Z6J6 570 aa9.56□□□□□ -0.88
LINC01961-201ENST00000449954 TMCO2Q7Z6W1 182 aaPredicted RBP9.56□□□□□ -0.88
LINC01961-201ENST00000449954 CAGE1Q8TC20 777 aa9.56□□□□□ -0.88
LINC01961-201ENST00000449954 AFAP1L1Q8TED9 768 aa9.56□□□□□ -0.88
LINC01961-201ENST00000449954 EMID1Q96A84 441 aaPredicted RBP9.56□□□□□ -0.88
LINC01961-201ENST00000449954 FGD4Q96M96 766 aa9.56□□□□□ -0.88
LINC01961-201ENST00000449954 MAP1BP46821 2468 aaKnown RBP9.56□□□□□ -0.88
LINC01961-201ENST00000449954 PTPRCP08575 1304 aa9.56□□□□□ -0.88
LINC01961-201ENST00000449954 USP24Q9UPU5 2620 aa9.55□□□□□ -0.88
LINC01961-201ENST00000449954 FAM208BQ5VWN6 2430 aa9.55□□□□□ -0.88
LINC01961-201ENST00000449954 ATP2A1O14983 1001 aa9.55□□□□□ -0.88
LINC01961-201ENST00000449954 DYNC1LI2O43237 492 aaPredicted RBP9.55□□□□□ -0.88
LINC01961-201ENST00000449954 PTPN11Q06124 597 aaPredicted RBP9.55□□□□□ -0.88
LINC01961-201ENST00000449954 GABPAQ06546 454 aa9.55□□□□□ -0.88
LINC01961-201ENST00000449954 COL9A2Q14055 689 aaPredicted RBP9.55□□□□□ -0.88
LINC01961-201ENST00000449954 CLUL1Q15846 466 aa9.55□□□□□ -0.88
LINC01961-201ENST00000449954 NFRKBQ6P4R8 1299 aa9.55□□□□□ -0.88
LINC01961-201ENST00000449954 ANKRD35Q8N283 1001 aa9.55□□□□□ -0.88
LINC01961-201ENST00000449954 NEUROD6Q96NK8 337 aa9.55□□□□□ -0.88
LINC01961-201ENST00000449954 FBXO28Q9NVF7 368 aa9.55□□□□□ -0.88
LINC01961-201ENST00000449954 CD207Q9UJ71 328 aa9.55□□□□□ -0.88
LINC01961-201ENST00000449954 PA2G4Q9UQ80 394 aaKnown RBP9.55□□□□□ -0.88
LINC01961-201ENST00000449954 NOD1Q9Y239 953 aa9.55□□□□□ -0.88
LINC01961-201ENST00000449954 CEP250Q9BV73 2442 aa9.55□□□□□ -0.88
LINC01961-201ENST00000449954 SCN10AQ9Y5Y9 1956 aa9.54□□□□□ -0.88
LINC01961-201ENST00000449954 ASB14A6NK59 587 aa9.54□□□□□ -0.88
LINC01961-201ENST00000449954 EYA4O95677 639 aa9.54□□□□□ -0.88
LINC01961-201ENST00000449954 SMPD1P17405 629 aa9.54□□□□□ -0.88
LINC01961-201ENST00000449954 ICAM3P32942 547 aa9.54□□□□□ -0.88
LINC01961-201ENST00000449954 CPT1AP50416 773 aa9.54□□□□□ -0.88
LINC01961-201ENST00000449954 PLCD1P51178 756 aa9.54□□□□□ -0.88
LINC01961-201ENST00000449954 DYNLL1P63167 89 aaKnown RBP9.54□□□□□ -0.88
LINC01961-201ENST00000449954 PURAQ00577 322 aaKnown RBP9.54□□□□□ -0.88
LINC01961-201ENST00000449954 GPM6BQ13491 265 aa9.54□□□□□ -0.88
LINC01961-201ENST00000449954 ACAP1Q15027 740 aa9.54□□□□□ -0.88
LINC01961-201ENST00000449954 FAM47CQ5HY64 1035 aa9.54□□□□□ -0.88
LINC01961-201ENST00000449954 PLA2G2CQ5R387 149 aa9.54□□□□□ -0.88
LINC01961-201ENST00000449954 LMAN2LQ9H0V9 348 aa9.54□□□□□ -0.88
LINC01961-201ENST00000449954 GOPCQ9HD26 462 aa9.54□□□□□ -0.88
LINC01961-201ENST00000449954 PRDM9Q9NQV7 894 aa9.54□□□□□ -0.88
LINC01961-201ENST00000449954 HDAC5Q9UQL6 1122 aa9.54□□□□□ -0.88
LINC01961-201ENST00000449954 NAV1Q8NEY1 1877 aa9.53□□□□□ -0.88
LINC01961-201ENST00000449954 NRG2O14511 850 aaPredicted RBP9.53□□□□□ -0.88
LINC01961-201ENST00000449954 HOXA2O43364 376 aa9.53□□□□□ -0.88
LINC01961-201ENST00000449954 TBX10O75333 385 aa9.53□□□□□ -0.88
LINC01961-201ENST00000449954 CXCL10P02778 98 aa9.53□□□□□ -0.88
LINC01961-201ENST00000449954 UBTFL1P0CB47 393 aaPredicted RBP9.53□□□□□ -0.88
LINC01961-201ENST00000449954 HTRA4P83105 476 aaPredicted RBP9.53□□□□□ -0.88
LINC01961-201ENST00000449954 DLX2Q07687 328 aaPredicted RBP9.53□□□□□ -0.88
LINC01961-201ENST00000449954 TFCP2Q12800 502 aa9.53□□□□□ -0.88
LINC01961-201ENST00000449954 IKBKEQ14164 716 aa9.53□□□□□ -0.88
LINC01961-201ENST00000449954 AMHR2Q16671 573 aa9.53□□□□□ -0.88
LINC01961-201ENST00000449954 IQSEC1Q6DN90 963 aa9.53□□□□□ -0.88
LINC01961-201ENST00000449954 TMED8Q6PL24 325 aaPredicted RBP9.53□□□□□ -0.88
LINC01961-201ENST00000449954 ZNF598Q86UK7 904 aaKnown RBP9.53□□□□□ -0.88
LINC01961-201ENST00000449954 FBXO11Q86XK2 927 aa9.53□□□□□ -0.88
LINC01961-201ENST00000449954 CHST13Q8NET6 341 aa9.53□□□□□ -0.88
LINC01961-201ENST00000449954 RIPOR3Q96MK2 946 aa9.53□□□□□ -0.88
LINC01961-201ENST00000449954 MTG1Q9BT17 334 aaPredicted RBP9.53□□□□□ -0.88
LINC01961-201ENST00000449954 DLL3Q9NYJ7 618 aa9.53□□□□□ -0.88
LINC01961-201ENST00000449954 SWAP70Q9UH65 585 aa9.53□□□□□ -0.88
LINC01961-201ENST00000449954 FCF1Q9Y324 198 aaKnown RBP9.53□□□□□ -0.88
LINC01961-201ENST00000449954 USP17L12C9JPN9 530 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 USP17L21D6R901 530 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 POLR3DP05423 398 aaPredicted RBP9.52□□□□□ -0.89
LINC01961-201ENST00000449954 SELPP16109 830 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 CYP7A1P22680 504 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 GUCA2AQ02747 115 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 RBL2Q08999 1139 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 HYAL1Q12794 435 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 PTPN21Q16825 1174 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 RALGAPA2Q2PPJ7 1873 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 BRDTQ58F21 947 aaPredicted RBP9.52□□□□□ -0.89
LINC01961-201ENST00000449954 FAM117BQ6P1L5 589 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 LRRC8DQ7L1W4 858 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 WDR63Q8IWG1 891 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 SMRP1Q8NCR6 262 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 SLF1Q9BQI6 1058 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 SEMA4AQ9H3S1 761 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 RIPK3Q9Y572 518 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 RAD50Q92878 1312 aa9.52□□□□□ -0.89
LINC01961-201ENST00000449954 MYH8P13535 1937 aa9.51□□□□□ -0.89
LINC01961-201ENST00000449954 TRIM66O15016 1216 aa9.51□□□□□ -0.89
LINC01961-201ENST00000449954 AMHP03971 560 aa9.51□□□□□ -0.89
LINC01961-201ENST00000449954 NDUFV1P49821 464 aa9.51□□□□□ -0.89
LINC01961-201ENST00000449954 MSS51Q4VC12 460 aa9.51□□□□□ -0.89
LINC01961-201ENST00000449954 FAM83BQ5T0W9 1011 aa9.51□□□□□ -0.89
LINC01961-201ENST00000449954 SIAH1Q8IUQ4 282 aa9.51□□□□□ -0.89
LINC01961-201ENST00000449954 TMEM192Q8IY95 271 aa9.51□□□□□ -0.89
LINC01961-201ENST00000449954 FAM133AQ8N9E0 248 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms