RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TRMT44Q8IYL2 757 aaKnown RBP14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 TRIM58Q8NG06 486 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 HAUS4Q9H6D7 363 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 EBF2Q9HAK2 575 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 FESP07332 822 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 PCP11498 1178 aaKnown RBP14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 LAMB3Q13751 1172 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 ANKRD20A8PQ5CZ79 823 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 RRP12Q5JTH9 1297 aaKnown RBP14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 CUL5Q93034 780 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 ZKSCAN3Q9BRR0 538 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 NUP58Q9BVL2 599 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 RNF26Q9BY78 433 aaPredicted RBP14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 CORO1CQ9ULV4 474 aaPredicted RBP14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 CYP2D7A0A087X1C5 515 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 AHCYL1O43865 530 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 MFAP3LO75121 409 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 FUT2Q10981 343 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 SPRED3Q2MJR0 410 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 CATIPQ7Z7H3 387 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 SHISA4Q96DD7 197 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 OSBPL9Q96SU4 736 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 DCP1AQ9NPI6 582 aaPredicted RBP14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 SAMSN1Q9NSI8 373 aaKnown RBP14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 KRT86O43790 486 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 CASP14P31944 242 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 GUCY1A2P33402 732 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 XRCC4Q13426 336 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 FAM114A1Q8IWE2 563 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 C15orf41Q9Y2V0 281 aa14.86□□□□□ -0.03
SYNGAP1-204ENST00000449372 BMP6P22004 513 aa14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 SCTRP47872 440 aa14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 FMR1Q06787 632 aaKnown RBP eCLIP14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 SBK1Q52WX2 424 aa14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 MSL1Q68DK7 614 aa14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 FOXP4Q8IVH2 680 aaPredicted RBP14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 G3BP2Q9UN86 482 aaKnown RBP14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 KIF4AO95239 1232 aa14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 ANP32DO95626 131 aa14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 KRT14P02533 472 aa14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 ATP1A1P05023 1023 aaKnown RBP14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 HOXA10P31260 410 aaPredicted RBP14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 ENAHQ8N8S7 591 aaPredicted RBP14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 EZH1Q92800 747 aaPredicted RBP14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 CYFIP2Q96F07 1278 aa14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 SLF1Q9BQI6 1058 aa14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 QSER1Q2KHR3 1735 aa14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 XDHP47989 1333 aa14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 PAPOLAP51003 745 aaKnown RBP14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 PPANQ9NQ55 473 aaKnown RBP14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 FBXO2Q9UK22 296 aaPredicted RBP14.85□□□□□ -0.03
SYNGAP1-204ENST00000449372 BTBD18B2RXH4 712 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 POLRMTO00411 1230 aaKnown RBP14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 ORC4O43929 436 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 SARSP49591 514 aaKnown RBP14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 APBA1Q02410 837 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 CRACR2BQ8N4Y2 399 aaPredicted RBP14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 TSEN2Q8NCE0 465 aaKnown RBP14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 TSGA10Q9BZW7 698 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 PCDHGC5Q9Y5F6 944 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 TNKSO95271 1327 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 PPFIA2O75334 1257 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 TRAPPC10P48553 1259 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 GRIK5Q16478 980 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 C1QTNF12Q5T7M4 302 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 ZNF654Q8IZM8 581 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 SUDS3Q9H7L9 328 aaPredicted RBP14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 ATP8A2Q9NTI2 1148 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 LMCD1Q9NZU5 365 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 COL11A2P13942 1736 aaPredicted RBP14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 NR1D1P20393 614 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 MDH1P40925 334 aaKnown RBP14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 GPSM2P81274 684 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 RUBCNQ92622 972 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 PRDM16Q9HAZ2 1276 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 TRIM10Q9UDY6 481 aa14.84□□□□□ -0.03
SYNGAP1-204ENST00000449372 USO1O60763 962 aaKnown RBP14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 SERPINB2P05120 415 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 RANBP1P43487 201 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 ELF3P78545 371 aaPredicted RBP14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 MTA1Q13330 715 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 RRAGBQ5VZM2 374 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 CWF19L1Q69YN2 538 aaKnown RBP14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 HIBCHQ6NVY1 386 aaPredicted RBP14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 MFN1Q8IWA4 741 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 FANCBQ8NB91 859 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 LUC7LQ9NQ29 371 aaKnown RBP14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 PAPOLBQ9NRJ5 636 aaKnown RBP14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 ROBO3Q96MS0 1386 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 MINDY4BA8MYZ0 360 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 PSMD14O00487 310 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 C2orf54Q08AI8 447 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 PAK1Q13153 545 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 SLMAPQ14BN4 828 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 KRT27Q7Z3Y8 459 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 JAKMIP2Q96AA8 810 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 ZIM3Q96PE6 472 aa14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 ZSCAN10Q96SZ4 725 aaPredicted RBP14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 LUC7L2Q9Y383 392 aaKnown RBP14.83□□□□□ -0.04
SYNGAP1-204ENST00000449372 ZNF646O15015 1829 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms