RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 VTI1AQ96AJ9 217 aa16.25■□□□□ 0.19
RTFDC1-204ENST00000449062 SEZ6LQ9BYH1 1024 aa16.25■□□□□ 0.19
RTFDC1-204ENST00000449062 UBE2OQ9C0C9 1292 aaKnown RBP16.25■□□□□ 0.19
RTFDC1-204ENST00000449062 ZSWIM6Q9HCJ5 1215 aa16.25■□□□□ 0.19
RTFDC1-204ENST00000449062 KLF18A0A0U1RQI7 1052 aa16.24■□□□□ 0.19
RTFDC1-204ENST00000449062 SOX1O00570 391 aaPredicted RBP16.24■□□□□ 0.19
RTFDC1-204ENST00000449062 ADD1P35611 737 aaKnown RBP16.24■□□□□ 0.19
RTFDC1-204ENST00000449062 PSMC6P62333 389 aa16.24■□□□□ 0.19
RTFDC1-204ENST00000449062 MRPS9P82933 396 aaKnown RBP16.24■□□□□ 0.19
RTFDC1-204ENST00000449062 SP2Q02086 613 aa16.24■□□□□ 0.19
RTFDC1-204ENST00000449062 APOBRQ0VD83 1088 aa16.24■□□□□ 0.19
RTFDC1-204ENST00000449062 BLOC1S2Q6QNY1 142 aa16.24■□□□□ 0.19
RTFDC1-204ENST00000449062 OR6J1Q8NGC5 347 aa16.24■□□□□ 0.19
RTFDC1-204ENST00000449062 EMID1Q96A84 441 aaPredicted RBP16.24■□□□□ 0.19
RTFDC1-204ENST00000449062 TMEM39AQ9NV64 488 aa16.24■□□□□ 0.19
RTFDC1-204ENST00000449062 POLR3EQ9NVU0 708 aa16.24■□□□□ 0.19
RTFDC1-204ENST00000449062 RBM28Q9NW13 759 aaKnown RBP16.24■□□□□ 0.19
RTFDC1-204ENST00000449062 PRKAG2Q9UGJ0 569 aa16.24■□□□□ 0.19
RTFDC1-204ENST00000449062 V9GY48 417 aaPredicted RBP16.24■□□□□ 0.19
RTFDC1-204ENST00000449062 CNTNAP5Q8WYK1 1306 aa16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 LAMA2P24043 3122 aaKnown RBP16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 MYCLP12524 364 aaPredicted RBP16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 PSMA5P28066 241 aa16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 CPT1AP50416 773 aa16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 RTN1Q16799 776 aa16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 LRIT3Q3SXY7 679 aa16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 TYW1BQ6NUM6 668 aa16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 TDHQ8IZJ6 230 aa16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 AFG1LQ8WV93 481 aa16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 BRF1Q92994 677 aa16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 ZFP91Q96JP5 570 aaPredicted RBP16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 LBHD1Q9BQE6 289 aaPredicted RBP16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 TM6SF1Q9BZW5 370 aa16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 PSTPIP2Q9H939 334 aa16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 PRDM5Q9NQX1 630 aaPredicted RBP16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 SEC63Q9UGP8 760 aaKnown RBP16.23■□□□□ 0.19
RTFDC1-204ENST00000449062 MROH7Q68CQ1 1323 aa16.22■□□□□ 0.19
RTFDC1-204ENST00000449062 KPNA6O60684 536 aa16.22■□□□□ 0.19
RTFDC1-204ENST00000449062 TIMP1P01033 207 aa16.22■□□□□ 0.19
RTFDC1-204ENST00000449062 GH1P01241 217 aa16.22■□□□□ 0.19
RTFDC1-204ENST00000449062 TGFB3P10600 412 aa16.22■□□□□ 0.19
RTFDC1-204ENST00000449062 HOXD8P13378 290 aaPredicted RBP16.22■□□□□ 0.19
RTFDC1-204ENST00000449062 ICAM3P32942 547 aa16.22■□□□□ 0.19
RTFDC1-204ENST00000449062 EPHB4P54760 987 aa16.22■□□□□ 0.19
RTFDC1-204ENST00000449062 MYSM1Q5VVJ2 828 aa16.22■□□□□ 0.19
RTFDC1-204ENST00000449062 KAT2BQ92831 832 aa16.22■□□□□ 0.19
RTFDC1-204ENST00000449062 GPKOWQ92917 476 aaPredicted RBP eCLIP16.22■□□□□ 0.198e-6■■□□□ 13.6
RTFDC1-204ENST00000449062 INPP4AQ96PE3 977 aaPredicted RBP16.22■□□□□ 0.19
RTFDC1-204ENST00000449062 MTG1Q9BT17 334 aaPredicted RBP16.22■□□□□ 0.19
RTFDC1-204ENST00000449062 BCAS3Q9H6U6 928 aa16.22■□□□□ 0.19
RTFDC1-204ENST00000449062 GOLGA8AA7E2F4 631 aa16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 GOLGA8BA8MQT2 603 aa16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 SPATA31C2B4DYI2 1134 aa16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 MYL3P08590 195 aa16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 CASTP20810 708 aaKnown RBP16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 CCND2P30279 289 aa16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 SEMA3FQ13275 785 aa16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 LAMC2Q13753 1193 aa16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 TOB2Q14106 344 aaPredicted RBP16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 NTRK3Q16288 839 aa16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 NBPF20Q3BBV1 942 aa16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 WWC2Q6AWC2 1192 aa16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 KCNV1Q6PIU1 500 aa16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 RUFY3Q7L099 469 aa16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 C16orf59Q7L2K0 433 aa16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 TRPV6Q9H1D0 765 aa16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 ALDH8A1Q9H2A2 487 aaPredicted RBP16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 NID2Q14112 1375 aa16.21■□□□□ 0.19
RTFDC1-204ENST00000449062 MMP3P08254 477 aa16.2■□□□□ 0.18
RTFDC1-204ENST00000449062 RAG1P15918 1043 aa16.2■□□□□ 0.18
RTFDC1-204ENST00000449062 PDIA3P30101 505 aaKnown RBP16.2■□□□□ 0.18
RTFDC1-204ENST00000449062 SHHQ15465 462 aa16.2■□□□□ 0.18
RTFDC1-204ENST00000449062 BRDTQ58F21 947 aaPredicted RBP16.2■□□□□ 0.18
RTFDC1-204ENST00000449062 C9orf50Q5SZB4 431 aa16.2■□□□□ 0.18
RTFDC1-204ENST00000449062 CELF3Q5SZQ8 465 aaKnown RBP16.2■□□□□ 0.18
RTFDC1-204ENST00000449062 PCNX4Q63HM2 1172 aa16.2■□□□□ 0.18
RTFDC1-204ENST00000449062 XRRA1Q6P2D8 792 aa16.2■□□□□ 0.18
RTFDC1-204ENST00000449062 TEX2Q8IWB9 1127 aa16.2■□□□□ 0.18
RTFDC1-204ENST00000449062 SMARCC2Q8TAQ2 1214 aa16.2■□□□□ 0.18
RTFDC1-204ENST00000449062 IL17RAQ96F46 866 aa16.2■□□□□ 0.18
RTFDC1-204ENST00000449062 MRVI1Q9Y6F6 885 aa16.2■□□□□ 0.18
RTFDC1-204ENST00000449062 SCN10AQ9Y5Y9 1956 aa16.2■□□□□ 0.18
RTFDC1-204ENST00000449062 STXBP3O00186 592 aa16.19■□□□□ 0.18
RTFDC1-204ENST00000449062 B4GALT4O60513 344 aa16.19■□□□□ 0.18
RTFDC1-204ENST00000449062 PPFIA4O75335 1185 aa16.19■□□□□ 0.18
RTFDC1-204ENST00000449062 STAM2O75886 525 aa16.19■□□□□ 0.18
RTFDC1-204ENST00000449062 PKN1Q16512 942 aa16.19■□□□□ 0.18
RTFDC1-204ENST00000449062 MFSD5Q6N075 450 aa16.19■□□□□ 0.18
RTFDC1-204ENST00000449062 HEATR3Q7Z4Q2 680 aa16.19■□□□□ 0.18
RTFDC1-204ENST00000449062 PPTC7Q8NI37 304 aa16.19■□□□□ 0.18
RTFDC1-204ENST00000449062 VWCEQ96DN2 955 aa16.19■□□□□ 0.18
RTFDC1-204ENST00000449062 LRCH3Q96II8 777 aa16.19■□□□□ 0.18
RTFDC1-204ENST00000449062 BARHL2Q9NY43 387 aa16.19■□□□□ 0.18
RTFDC1-204ENST00000449062 KIAA1217Q5T5P2 1943 aa16.19■□□□□ 0.18
RTFDC1-204ENST00000449062 LTBP2Q14767 1821 aa16.18■□□□□ 0.18
RTFDC1-204ENST00000449062 CCDC196A0A1B0GTZ2 297 aa16.18■□□□□ 0.18
RTFDC1-204ENST00000449062 TLR3O15455 904 aaKnown RBP16.18■□□□□ 0.18
RTFDC1-204ENST00000449062 UBA1P22314 1058 aaKnown RBP16.18■□□□□ 0.18
RTFDC1-204ENST00000449062 METAP2P50579 478 aaKnown RBP eCLIP16.18■□□□□ 0.183e-6■■□□□ 14.5
RTFDC1-204ENST00000449062 FGD1P98174 961 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms